View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_531 (Length: 213)
Name: NF10829A_low_531
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_531 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 49086377 - 49086584
Alignment:
| Q |
1 |
taaaaattgaatgtgacgtgttgtgggatctgtcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaataatgagcaaaccaa |
100 |
Q |
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| T |
49086377 |
taaaaattgaatgtgacgtgttgtgggatctggcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaa |
49086476 |
T |
|
| Q |
101 |
ttttcattgaatgcagaaactgttggttttataagtctataagtttatccaaatgtcggtgaaacgactcgatctaagccacgtctccttcattccattg |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
49086477 |
ttttcattgcatgcagaaactgttggttttataagtctataagtttatccaaatgtcggtgaaacgacccgatctaagccacgtctccttcattccattg |
49086576 |
T |
|
| Q |
201 |
tcccttct |
208 |
Q |
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|||||||| |
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| T |
49086577 |
tcccttct |
49086584 |
T |
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