View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10831_high_19 (Length: 326)

Name: NF10831_high_19
Description: NF10831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10831_high_19
NF10831_high_19
[»] chr7 (16 HSPs)
chr7 (18-314)||(26491897-26492194)
chr7 (151-231)||(16560975-16561055)
chr7 (151-231)||(16604607-16604687)
chr7 (151-219)||(31958613-31958681)
chr7 (151-219)||(25069354-25069422)
chr7 (155-219)||(46170701-46170765)
chr7 (155-200)||(44605930-44605975)
chr7 (155-219)||(33610650-33610714)
chr7 (155-218)||(9822579-9822642)
chr7 (155-218)||(10724504-10724567)
chr7 (155-218)||(34191883-34191946)
chr7 (98-220)||(34259252-34259377)
chr7 (155-217)||(1582215-1582277)
chr7 (155-201)||(10198367-10198413)
chr7 (155-201)||(33628256-33628302)
chr7 (155-220)||(10992694-10992759)
[»] chr8 (16 HSPs)
chr8 (151-220)||(29867784-29867853)
chr8 (151-220)||(45219506-45219575)
chr8 (95-202)||(31893202-31893312)
chr8 (153-217)||(29190616-29190680)
chr8 (97-220)||(36823420-36823546)
chr8 (155-219)||(28761660-28761724)
chr8 (155-197)||(12639359-12639401)
chr8 (155-200)||(5970001-5970046)
chr8 (155-201)||(4455352-4455398)
chr8 (155-201)||(18656629-18656675)
chr8 (155-201)||(39375174-39375220)
chr8 (155-220)||(6545743-6545808)
chr8 (151-208)||(27845913-27845970)
chr8 (164-201)||(39024462-39024499)
chr8 (155-200)||(42063522-42063567)
chr8 (175-211)||(32493172-32493208)
[»] chr4 (16 HSPs)
chr4 (98-217)||(25510487-25510609)
chr4 (98-218)||(8132791-8132914)
chr4 (155-211)||(6354957-6355013)
chr4 (157-219)||(18707466-18707528)
chr4 (154-220)||(293528-293594)
chr4 (155-217)||(26203658-26203720)
chr4 (155-217)||(38519347-38519409)
chr4 (151-219)||(38465224-38465292)
chr4 (155-219)||(44352147-44352211)
chr4 (171-218)||(18734984-18735031)
chr4 (155-201)||(1936504-1936550)
chr4 (155-217)||(4414475-4414537)
chr4 (155-201)||(25232668-25232714)
chr4 (155-201)||(43245713-43245759)
chr4 (155-200)||(7648082-7648127)
chr4 (151-219)||(2039138-2039206)
[»] chr1 (24 HSPs)
chr1 (98-217)||(31986066-31986188)
chr1 (95-220)||(28281973-28282101)
chr1 (98-218)||(3252226-3252349)
chr1 (155-219)||(962474-962538)
chr1 (155-219)||(3014151-3014215)
chr1 (149-219)||(27415209-27415279)
chr1 (151-232)||(45193165-45193246)
chr1 (154-218)||(4331938-4332002)
chr1 (151-219)||(46545436-46545504)
chr1 (167-219)||(52585220-52585272)
chr1 (151-198)||(51727112-51727159)
chr1 (155-220)||(20726043-20726108)
chr1 (170-219)||(24638774-24638823)
chr1 (155-219)||(3794205-3794269)
chr1 (155-219)||(32364181-32364245)
chr1 (155-219)||(33690219-33690283)
chr1 (151-198)||(11191410-11191457)
chr1 (155-218)||(20117824-20117887)
chr1 (155-218)||(44410772-44410835)
chr1 (168-219)||(45774829-45774880)
chr1 (155-201)||(4225077-4225123)
chr1 (155-200)||(42866338-42866383)
chr1 (175-219)||(45484228-45484272)
chr1 (151-219)||(50358945-50359013)
[»] chr6 (6 HSPs)
chr6 (151-217)||(735092-735158)
chr6 (151-219)||(21528820-21528888)
chr6 (155-201)||(31513370-31513416)
chr6 (155-200)||(21289610-21289655)
chr6 (161-202)||(29419764-29419805)
chr6 (155-211)||(6817350-6817406)
[»] chr5 (10 HSPs)
chr5 (155-217)||(13956990-13957052)
chr5 (151-218)||(23015089-23015156)
chr5 (155-219)||(6273188-6273252)
chr5 (155-219)||(35456567-35456631)
chr5 (158-219)||(32383867-32383928)
chr5 (155-219)||(14351917-14351981)
chr5 (162-220)||(28014994-28015052)
chr5 (151-205)||(43581675-43581729)
chr5 (155-220)||(6459767-6459832)
chr5 (155-200)||(14635405-14635450)
[»] chr3 (19 HSPs)
chr3 (155-219)||(42907829-42907893)
chr3 (155-218)||(42217141-42217204)
chr3 (155-218)||(53351231-53351294)
chr3 (98-217)||(3752908-3753030)
chr3 (155-218)||(15100664-15100727)
chr3 (151-201)||(6101917-6101967)
chr3 (155-217)||(35054690-35054752)
chr3 (151-220)||(21603574-21603643)
chr3 (155-200)||(29025319-29025364)
chr3 (155-208)||(29727797-29727850)
chr3 (151-231)||(39750132-39750211)
chr3 (159-201)||(5123818-5123860)
chr3 (155-201)||(45158520-45158566)
chr3 (155-219)||(11575054-11575118)
chr3 (164-220)||(21635339-21635395)
chr3 (151-219)||(41459653-41459721)
chr3 (175-219)||(50007273-50007317)
chr3 (175-219)||(51229489-51229533)
chr3 (155-219)||(51537168-51537232)
[»] chr2 (15 HSPs)
chr2 (96-219)||(12365512-12365638)
chr2 (154-220)||(43869923-43869989)
chr2 (98-201)||(37254831-37254937)
chr2 (155-219)||(6065490-6065554)
chr2 (155-207)||(16106706-16106758)
chr2 (149-217)||(37255966-37256034)
chr2 (155-218)||(19881999-19882062)
chr2 (91-217)||(37032791-37032920)
chr2 (160-219)||(37484468-37484527)
chr2 (155-201)||(3988765-3988811)
chr2 (155-201)||(35305293-35305339)
chr2 (175-219)||(7501459-7501503)
chr2 (155-219)||(20907131-20907195)
chr2 (149-201)||(29812319-29812371)
chr2 (151-231)||(42345553-42345633)
[»] scaffold0242 (1 HSPs)
scaffold0242 (155-197)||(17853-17895)
[»] scaffold0043 (1 HSPs)
scaffold0043 (155-217)||(64405-64467)
[»] scaffold0131 (1 HSPs)
scaffold0131 (151-219)||(7852-7920)
[»] scaffold0116 (1 HSPs)
scaffold0116 (155-201)||(7899-7945)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 5e-93; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 26491897 - 26492194
Alignment:
Q  18 aaatgatcattccttcttctaaaattatttcaaaaagtttaactattcgatctttcagctgaagaggtaagactaaaaatcatagttttaaaactcggac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||     
T  26491897 aaatgatcattccttcttctaaaattatttcaaaaagtttaactattcgatctttcagcttaagaggtaagactaaaaattatagttttaaaactcggat 26491996  T
Q  118 aggtcgtcgacttggtagagttattaggtcagttcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccg----aatga 213  Q
     | |||||| || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||  | |||||| || |||   |     ||||    
T  26491997 cgatcgtcggctcggtagggttactgggtcagttcattggttgaaccattgagtcaatggttgaaccgcagaattgaacc-gaatgacttggttatatga 26492095  T
Q  214 ctcggtccttataaaaaagtgtatactatcaaaccatatgacttgagactgctttgaaatttgtctaaacttccctctccctctccaacaagtcggccct 313  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||| ||| |||||||    
T  26492096 ctcggtccttataaaaaattgtatactatcaaaccatatgacttgagactgctttgaaatttgcctaa--ttccctccccctctccaataagccggccct 26492193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 16560975 - 16561055
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtccttataaaaaa 231  Q
    |||||||||||||||||| |||| ||||||||||||||||  |||||||||| ||| | ||||||||||| ||| ||||||    
T  16560975 tcattggttgaaccattgggtcactggttgaaccgcatgatagaaccggattaaactggatgactcggtcattaaaaaaaa 16561055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 16604687 - 16604607
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtccttataaaaaa 231  Q
    |||||||||||||||||| |||| ||||||||||||||||  |||||||||| ||| | ||||||||||| ||| ||||||    
T  16604687 tcattggttgaaccattgggtcactggttgaaccgcatgatagaaccggattaaactggatgactcggtcattaaaaaaaa 16604607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 31958681 - 31958613
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| |||||||||||||| |||| |||||||||||  ||| ||||||||| |||||||||||||    
T  31958681 tcattggtcgaaccattgagtcactggtcgaaccgcatgatagaatcggattgaatcgaatgactcggt 31958613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 25069354 - 25069422
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||| ||| || || || |||||||    
T  25069354 tcattggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggt 25069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 46170701 - 46170765
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| |||||||||||| ||||||||||| ||||||||||  |||||||| |||||||    
T  46170701 tggtcgaaccactgagtcaatggtcgaaccgcatgaatgaaccggatcaaaccgaataactcggt 46170765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 44605975 - 44605930
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  44605975 tggttgaaccactgagtcattggtcgaaccgcatgactgaaccgga 44605930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 33610650 - 33610714
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| ||||||||||||||||||||| | |||| |||| ||| |||||||    
T  33610650 tggtcgaaccactgagtcattggttgaaccgcatgactgaatcagattaaaccaaataactcggt 33610714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 9822579 - 9822642
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| |||| ||||||||| ||||||||||||| ||||| || ||||||    
T  9822579 tggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 9822642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 10724504 - 10724567
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| |||| ||||||||| ||||||||||||| ||||| || ||||||    
T  10724504 tggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 10724567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 34191946 - 34191883
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| |||||||||||||||||| || |||||| |||| ||| ||||||    
T  34191946 tggtcgaaccactgagtcattggttgaaccgcatgactaaatcggattaaaccaaataactcgg 34191883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 34259377 - 34259252
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    ||||||||||||||||||   ||||||||||| || |  | |||||||||| |   | | |||| |||||| ||||||| ||||||||||||||||||||    
T  34259377 catagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactga 34259278  T
Q  195 accggattgaaccgaatgactcggtc 220  Q
    | || ||| || || || ||||||||    
T  34259277 atcgaattaaatcggataactcggtc 34259252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 1582215 - 1582277
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| ||||| |||||||| || |||||||||||||||||| |||||| || || ||||||||    
T  1582215 tggtcgaaccgttgagtcattgattgaaccgcatgactgaatcggattaaatcggatgactcg 1582277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 10198367 - 10198413
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  10198367 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 10198413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 33628302 - 33628256
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||||    
T  33628302 tggttgaaccattgggtcattggtcgaaccgcatgactaaaccggat 33628256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 10992759 - 10992694
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||| |||||| | ||||| ||||||||| ||||||||||| |||||| ||||| || ||||||||    
T  10992759 tggtcgaaccactaagtcactggttgaactgcatgactgaatcggattaaaccggataactcggtc 10992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 29867784 - 29867853
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| || || |||||||||||    
T  29867784 tcattggttgaaccagtgagtcactggttgaaccgcatgactgaaccggattaaatcggatgactcggtc 29867853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 45219575 - 45219506
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  45219575 tcattggtcgaaccattgggtcaatggttgaaccgcatgactgaatcggattaaaccggatgactcggtc 45219506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 31893312 - 31893202
Alignment:
Q  95 aatcatagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgac 191  Q
    |||||||||||||||| |||||| ||||||||||| ||||  |||| | ||||| |   |||| |||  ||||| ||||||| |||||||||||||||||    
T  31893312 aatcatagttttaaaaatcggactggtcgtcgactcggtaaggttactgggtcaatgagtcatcggtcaaaccactgagtcactggttgaaccgcatgac 31893213  T
Q  192 tgaaccggatt 202  Q
    |||||||||||    
T  31893212 tgaaccggatt 31893202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 29190680 - 29190616
Alignment:
Q  153 attggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    ||||||||||| |||| |||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  29190680 attggttgaacaattgggtcactggttgaaccgcatgatggaaccggattaaaccgaatgactcg 29190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 36823546 - 36823420
Alignment:
Q  97 tcatagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgactg 193  Q
    ||||||||||||||||||||| |||| | |||| |||   |||| | ||||| |   | |||||||||||||||| |||| ||||||||||||||||  |    
T  36823546 tcatagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagttattggttgaaccattgggtcactggttgaaccgcatgatgg 36823447  T
Q  194 aaccggattgaaccgaatgactcggtc 220  Q
    ||||||||| || || |||||||||||    
T  36823446 aaccggattaaatcggatgactcggtc 36823420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 28761724 - 28761660
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||| || |||||||    
T  28761724 tggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccggataactcggt 28761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 12639401 - 12639359
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaacc 197  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  12639401 tggttgaaccattgagtcattggttgaaccgcatgacttaacc 12639359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 5970046 - 5970001
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||    
T  5970046 tggtcgaaccattgagtcattggttgaaccgcatgactgaatcgga 5970001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 4455398 - 4455352
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  4455398 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 4455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 18656675 - 18656629
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  18656675 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 18656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 39375174 - 39375220
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  39375174 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 39375220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 6545743 - 6545808
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||| ||||||  |||||| |||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  6545743 tggtcgaaccagcgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcggtc 6545808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 27845970 - 27845913
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccg 208  Q
    |||||||||||||||||| || | ||||||||||| ||||  |||||||||| |||||    
T  27845970 tcattggttgaaccattgggttactggttgaaccgtatgatagaaccggattaaaccg 27845913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 39024462 - 39024499
Alignment:
Q  164 cattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  39024462 cattgagtcattggtcgaaccgcatgactgaaccggat 39024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 42063522 - 42063567
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||    
T  42063522 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccgga 42063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 32493208 - 32493172
Alignment:
Q  175 tggttgaaccgcatgactgaaccggattgaaccgaat 211  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  32493208 tggttgaaccgcatgactgaaccgaattaaaccgaat 32493172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 25510487 - 25510609
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtca---gttcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    |||||||||||||||||||| ||||||||||| ||||  | |  | |||||   ||||||||||||||||| || |||| |||||||||||||  |||||    
T  25510487 catagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgcacaactga 25510586  T
Q  195 accggattgaaccgaatgactcg 217  Q
    | |||||||||||| ||||||||    
T  25510587 atcggattgaaccggatgactcg 25510609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 8132791 - 8132914
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    ||||||||||||||||||   |||| |||||| ||||||| || | ||||| |   | | ||||||||||| ||||||| ||||||||||||||||||||    
T  8132791 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgactga 8132890  T
Q  195 accggattgaaccgaatgactcgg 218  Q
    |||||||| ||||| || ||||||    
T  8132891 accggattaaaccggataactcgg 8132914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 6355013 - 6354957
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaat 211  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  6355013 tggtcgaaccattgagtcaatagttgaaccgcatgactgaaccggattaaaccgaat 6354957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 18707528 - 18707466
Alignment:
Q  157 gttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||||||| || |||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  18707528 gttgaaccactgtgtcattggttgaaccgcacgactgaatcggattgaaccgaatgactcggt 18707466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 293594 - 293528
Alignment:
Q  154 ttggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| |||| | ||||| |||||||||||    
T  293594 ttggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggtc 293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 26203720 - 26203658
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| ||||||| |||||| ||||||||| ||||||||||| |||||| ||||| ||||||||    
T  26203720 tggtcgaaccatcgagtcattggttgaactgcatgactgaatcggattaaaccggatgactcg 26203658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 38519347 - 38519409
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| |||||||||||||| |||||||||||||||||| |||| |||| || || ||||||||    
T  38519347 tggtcgaaccattgagtcactggttgaaccgcatgacttaaccagattaaatcggatgactcg 38519409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 38465224 - 38465292
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||||||| || ||||||| |||| ||||||||||||||||   ||||||| |||||| ||||||    
T  38465224 tcattggttgaatcactgagtcattggtcgaaccgcatgactgaattagattgaatcgaatggctcggt 38465292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 44352147 - 44352211
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| ||||||||| |||| ||||||||||||||||||||| | |||  ||||| ||||||||||    
T  44352147 tggtcgaaccattgggtcactggttgaaccgcatgactgaatcagatcaaaccggatgactcggt 44352211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 18735031 - 18734984
Alignment:
Q  171 tcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    ||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  18735031 tcaattgttgaaccacacgactgaatcggattgaaccgaatgactcgg 18734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 1936550 - 1936504
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  1936550 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 1936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 4414475 - 4414537
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| |||||| ||||||| | ||||||||||||||||||| |||||| ||||| || |||||    
T  4414475 tggtcgaaccactgagtcacttgttgaaccgcatgactgaatcggattaaaccggataactcg 4414537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 25232714 - 25232668
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  25232714 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 25232668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 43245759 - 43245713
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||||||||| | |||||||||||||| ||||||||||||    
T  43245759 tggtcgaaccattgagttactggttgaaccgcataactgaaccggat 43245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 7648082 - 7648127
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||    
T  7648082 tggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 7648127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 2039138 - 2039206
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| ||| |||||| ||||||| |||||||||| ||| ||||||||||||| || || ||||| ||||    
T  2039138 tcatcggtcgaaccactgagtcactggttgaacctcattactgaaccggattaaatcggatgacccggt 2039206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 31986188 - 31986066
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtca---gttcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    |||||||||||||||||||| ||||||||||| ||||  | |  | |||||   ||||||||||||||||| || |||| |||||||||||||  |||||    
T  31986188 catagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgcacaactga 31986089  T
Q  195 accggattgaaccgaatgactcg 217  Q
    | |||||||||||| ||||||||    
T  31986088 atcggattgaaccggatgactcg 31986066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28281973 - 28282101
Alignment:
Q  95 aatcatagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgac 191  Q
    ||||||||||||||||||||||| |||| | |||| |||   |||| | ||||| |   |||||||||||||||||| |||| ||||||||||||||||     
T  28281973 aatcatagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgat 28282072  T
Q  192 tgaaccggattgaaccgaatgactcggtc 220  Q
     ||||| |||| ||||| |||||||||||    
T  28282073 agaacctgattaaaccggatgactcggtc 28282101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 3252226 - 3252349
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    ||||||||||||||||||   |||| |||||| ||||||| || | ||||| |   | | ||||||||||| ||||||| ||||||||||||||||||||    
T  3252226 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactga 3252325  T
Q  195 accggattgaaccgaatgactcgg 218  Q
    |||||||| ||||| || ||||||    
T  3252326 accggattaaaccggataactcgg 3252349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 962538 - 962474
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||||| |||||||| |||||||    
T  962538 tggtcgaaccactgagtcactggttgaaccacatgactgaaccggattaaaccgaataactcggt 962474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 3014215 - 3014151
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||||| |||||||| |||||||    
T  3014215 tggtcgaaccactgagtcattggttgaaccacatgactgaaccggattaaaccgaataactcggt 3014151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 27415279 - 27415209
Alignment:
Q  149 gttcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||| ||||||||||| ||  ||| ||||||||||||| ||||||| || ||||||||||||||||||||    
T  27415279 gttcaatggttgaaccactggatcattggttgaaccgcacgactgaatcgaattgaaccgaatgactcggt 27415209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 45193246 - 45193165
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtccttataaaaaag 232  Q
    |||||||| |||||| ||| ||| | || |||||||||||| ||| |||||||||||| ||||||||||  |||||||||||    
T  45193246 tcattggtcgaaccactgaatcattagtcgaaccgcatgaccgaatcggattgaaccggatgactcggtatttataaaaaag 45193165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 4332002 - 4331938
Alignment:
Q  154 ttggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||||||||||| || |||| |||||||||||||||||| || |||||| ||||||| |||||||    
T  4332002 ttggttgaaccactgggtcattggttgaaccgcatgactaaatcggattaaaccgaaagactcgg 4331938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 46545436 - 46545504
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||| ||| || || || |||||||    
T  46545436 tcattggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggt 46545504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 52585220 - 52585272
Alignment:
Q  167 tgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||||| |||| ||||||||||||||||||||||| |||||| |||||||||    
T  52585220 tgagtcattggtcgaaccgcatgactgaaccggattaaaccgattgactcggt 52585272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 51727112 - 51727159
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccg 198  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||||    
T  51727112 tcattgatcgaaccattgagtcattggttgaaccgcatgactgaaccg 51727159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 20726043 - 20726108
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||| |||||| ||| ||| ||||||||| ||||||||||| |||||| ||||| |||||||||||    
T  20726043 tggtcgaaccactgactcactggttgaactgcatgactgaatcggattaaaccgtatgactcggtc 20726108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 24638774 - 24638823
Alignment:
Q  170 gtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||||||||||||||||||| ||||| |||||||| |||||||    
T  24638774 gtcactggttgaaccgcatgactgaactggattaaaccgaataactcggt 24638823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 3794205 - 3794269
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| ||||||||||||||||||||||| | || ||| |||| |||||||    
T  3794205 tggtcgaaccactgagtcattggttgaaccgcatgactgaaccagtttaaactgaataactcggt 3794269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 32364181 - 32364245
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| || |||| ||||||||||||||||||||| |||||| ||||| || |||||||    
T  32364181 tggtcgaaccactgggtcactggttgaaccgcatgactgaatcggattaaaccggataactcggt 32364245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 33690219 - 33690283
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||  |||||||||||||||| |||| |||||| |||||||| |||||||    
T  33690219 tggtcgaaccactgagtcgttggttgaaccgcatgattgaatcggattaaaccgaataactcggt 33690283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 11191457 - 11191410
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccg 198  Q
    |||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  11191457 tcattggtcgaaccactgagtcattggttgaaccacatgactgaaccg 11191410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 20117887 - 20117824
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||||||||| | |||||||||||||||||| || || |||||| || |||||||||    
T  20117887 tggtcgaaccattgagttattggttgaaccgcatgactaaatcgaattgaatcggatgactcgg 20117824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 44410772 - 44410835
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| |||||||||||||||||| || | |||| |||||||| ||||||    
T  44410772 tggtcgaaccactgagtcactggttgaaccgcatgactaaatcagattaaaccgaataactcgg 44410835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 45774829 - 45774880
Alignment:
Q  168 gagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||| || |||| |||||||||||||||||||| |||||||| |||||||    
T  45774829 gagtcattgattgagccgcatgactgaaccggattaaaccgaataactcggt 45774880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 4225123 - 4225077
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  4225123 tggtcgaaccactgagtcattggttgaaccgcataactgaaccggat 4225077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 42866338 - 42866383
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||    
T  42866338 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccgga 42866383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 45484228 - 45484272
Alignment:
Q  175 tggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||||||||||||||||||| |||||| ||||| || |||||||    
T  45484228 tggttgaaccgcatgactgaatcggattaaaccggataactcggt 45484272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 50359013 - 50358945
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| |||||| ||| ||| |||| ||||||||||||||||  | ||| |||||| |||||||||    
T  50359013 tcattggtcgaaccactgaatcattggtcgaaccgcatgactgaattgaattaaaccgattgactcggt 50358945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 735092 - 735158
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||||||| |||||||||||| | ||||||||| ||||||||||| |||||| ||||||||||||||    
T  735092 tcattggtcgaaccattgagtaactggttgaactgcatgactgaatcggattaaaccgaatgactcg 735158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 21528888 - 21528820
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||||||| || || || |||| |||| |||||||||||||||| ||||||||| || ||||||||||    
T  21528888 tcattggttcaatcactgggtcactggtcgaaccgcatgactgaatcggattgaatcggatgactcggt 21528820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 31513416 - 31513370
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||||    
T  31513416 tggttgaaccattgggtcattggtcgaaccgcatgactaaaccggat 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 21289610 - 21289655
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||    
T  21289610 tggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 21289655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 29419805 - 29419764
Alignment:
Q  161 aaccattgagtcaatggttgaaccgcatgactgaaccggatt 202  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  29419805 aaccactgagtcactggttgaaccgcatgactgaatcggatt 29419764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 6817350 - 6817406
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaat 211  Q
    |||| |||||| ||||||| |||||||||||||| ||| || |||||| ||||||||    
T  6817350 tggtcgaaccactgagtcactggttgaaccgcataactaaatcggattaaaccgaat 6817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 13956990 - 13957052
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  13956990 tggtcgaaccactgagtcactggttgaaccgcatgactgaaccggattaaaccgaataactcg 13957052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 23015089 - 23015156
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||| ||| ||||  |||||||||    
T  23015089 tcattggtcgaaccattgggtcattggttgaaccgcatgactgaaccgtattaaaccagatgactcgg 23015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 6273188 - 6273252
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| |||||||||||| |||||| |||||||||||||||  |||||||| |||||||    
T  6273188 tggtcgaaccactgagtcaatggtcgaaccgtatgactgaaccggatcaaaccgaataactcggt 6273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 35456567 - 35456631
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||| || |||||||    
T  35456567 tggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccggataactcggt 35456631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 32383928 - 32383867
Alignment:
Q  158 ttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| || |||| |||||||||||||||||||||  ||||| |||||||| |||||||    
T  32383928 ttgaaccactgtgtcattggttgaaccgcatgactgaattggattaaaccgaataactcggt 32383867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 14351981 - 14351917
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| | ||||||||||||||||||| |||||| ||||| || |||||||    
T  14351981 tggtcgaaccactgagtcattagttgaaccgcatgactgaatcggattaaaccggataactcggt 14351917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 28014994 - 28015052
Alignment:
Q  162 accattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    ||||||| ||||  |||||||||||||||||||| |||| | ||||| |||||||||||    
T  28014994 accattgggtcacgggttgaaccgcatgactgaatcggactaaaccggatgactcggtc 28015052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 43581729 - 43581675
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaa 205  Q
    ||||||||||||||| ||| ||| | || |||||||||||||||||| |||||||    
T  43581729 tcattggttgaaccactgaatcattagtcgaaccgcatgactgaaccagattgaa 43581675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 6459767 - 6459832
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||| |||||| || |||| ||||||||||||||||||||| |||||| ||||  || ||||||||    
T  6459767 tggtcgaaccactgggtcactggttgaaccgcatgactgaatcggattaaaccagataactcggtc 6459832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 14635405 - 14635450
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||    
T  14635405 tggtcgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 14635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 42907829 - 42907893
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||| ||||| || |||||||    
T  42907829 tggtcgaaccactgagtcattggttgaaccgcatgactgaaccggattaaaccgtattactcggt 42907893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 42217204 - 42217141
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| ||||||||||||||||||||| |||||| |||||||| ||||||    
T  42217204 tggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaaccgaataactcgg 42217141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 53351231 - 53351294
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||| ||||| || ||||||    
T  53351231 tggttgaaccactgagtcgttggttgaaccgcatgactgaaccggattaaaccggataactcgg 53351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 3753030 - 3752908
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtca---gttcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    ||||||||||||| |||||| | ||||||| | ||||  | |||||| |||   ||||| ||||| ||||| |  |||||||||||||| ||||||||||    
T  3753030 catagttttaaaattcggaccgatcgtcgattcggtaagggtattagatcacttgttcactggttaaaccactaggtcaatggttgaactgcatgactga 3752931  T
Q  195 accggattgaaccgaatgactcg 217  Q
    ||| ||||||| ||||| |||||    
T  3752930 accagattgaatcgaataactcg 3752908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 15100664 - 15100727
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| || |||||||||||||||||| |||||| |||||||| ||||||    
T  15100664 tggtcgaaccactgagtcactgattgaaccgcatgactgaatcggattaaaccgaataactcgg 15100727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 6101967 - 6101917
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  6101967 tcattggtcgaaccattgagtcactggtcgaaccgcatgactgaatcggat 6101917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 35054752 - 35054690
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| ||||||||| |||| |||||||||||||||||||||||| ||| |||| ||| |||||    
T  35054752 tggtcgaaccattgggtcactggttgaaccgcatgactgaaccgaattaaaccaaataactcg 35054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 21603643 - 21603574
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    |||||||||||||||||| |||| ||||||||| | ||||||||| ||||  ||| || |||||||||||    
T  21603643 tcattggttgaaccattgggtcactggttgaacagtatgactgaatcggaaagaatcggatgactcggtc 21603574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 29025319 - 29025364
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccgga 200  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  29025319 tggttgaaccagtgagtcattggtcgaaccgcatgactgaaccgga 29025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 29727797 - 29727850
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccg 208  Q
    ||||||||||| ||||||| | ||||||||||||||||||| |||||| |||||    
T  29727797 tggttgaaccactgagtcactagttgaaccgcatgactgaatcggattaaaccg 29727850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 39750211 - 39750132
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtccttataaaaaa 231  Q
    ||||||||||||||| ||||||| |||| || ||| ||||| ||| | ||||| |||||||||||||||  ||||||||||    
T  39750211 tcattggttgaaccactgagtcattggtcgatccgtatgacagaatctgattg-accgaatgactcggtatttataaaaaa 39750132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 5123818 - 5123860
Alignment:
Q  159 tgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||    
T  5123818 tgaaccattgagtcattggttgaaccgcatgaatgaactggat 5123860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 45158520 - 45158566
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||||||  |||||| |||| ||||||||||||||||||||||    
T  45158520 tggttgaaccaccgagtcattggtcgaaccgcatgactgaaccggat 45158566  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 11575054 - 11575118
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| ||||||| | |||| |||||||||||| |||||||| |||||  ||||| ||||||||||    
T  11575054 tggtcgaaccatcgggtcattggttgaaccgcgtgactgaatcggatcaaaccggatgactcggt 11575118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 21635395 - 21635339
Alignment:
Q  164 cattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    ||||| |||| ||||||||| | |||||||||||||| |||| || |||||||||||    
T  21635395 cattgggtcactggttgaacagtatgactgaaccggaatgaatcggatgactcggtc 21635339  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 41459721 - 41459653
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||| || ||||||||| |||| |||| ||||||||||||||||| | ||| || | |||||||||||    
T  41459721 tcattcgtcgaaccattgggtcattggtcgaaccgcatgactgaactgtattaaatcaaatgactcggt 41459653  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 50007317 - 50007273
Alignment:
Q  175 tggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||||    
T  50007317 tggttgaaccgcatgactgaatcggatcaaaccggatgactcggt 50007273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 51229533 - 51229489
Alignment:
Q  175 tggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||||||||||||| ||||||||| || ||||||||||    
T  51229533 tggtcgaaccgcatgactgaatcggattgaatcggatgactcggt 51229489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 51537232 - 51537168
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| || |||| ||||||||||||||| ||||| |||||| ||||| || |||||||    
T  51537232 tggtcgaaccactgggtcactggttgaaccgcatgtctgaatcggattaaaccggataactcggt 51537168  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 12365638 - 12365512
Alignment:
Q  96 atcatagttttaaaactcggacaggtcgtcgacttggtagagttattaggtca---gttcattggttgaaccattgagtcaatggttgaaccgcatgact 192  Q
    |||||||||||||||||||||| ||||||||| | |||   | || | |||||   ||| |||||| |||||| || |||| ||||||||||||||||||    
T  12365638 atcatagttttaaaactcggaccggtcgtcgattcggttagggtactgggtcactggtttattggtcgaaccactgggtcactggttgaaccgcatgact 12365539  T
Q  193 gaaccggattgaaccgaatgactcggt 219  Q
    |||||||  | ||||| ||||||||||    
T  12365538 gaaccgggataaaccggatgactcggt 12365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 43869989 - 43869923
Alignment:
Q  154 ttggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtc 220  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| |||| | ||||| |||||||||||    
T  43869989 ttggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggtc 43869923  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 37254937 - 37254831
Alignment:
Q  98 catagttttaaaactcggacaggtcgtcgacttggtagagttattaggtcagt---tcattggttgaaccattgagtcaatggttgaaccgcatgactga 194  Q
    |||||||||||||||||||| |||| | |||| |||   |||| | ||||| |   |||||||||||||||||| |||| ||||||||||||||||  ||    
T  37254937 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtcactggttgaaccgcatgataga 37254838  T
Q  195 accggat 201  Q
    |||||||    
T  37254837 accggat 37254831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 6065554 - 6065490
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||| || |||| ||||||||||||||||||||| | |||| |||||||| |||||||    
T  6065554 tggtcgaaccactgggtcattggttgaaccgcatgactgaatcagattaaaccgaataactcggt 6065490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 16106758 - 16106706
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaacc 207  Q
    |||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  16106758 tggtcgaaccactgagtcactggttgaaccgcatgactgaatcggattaaacc 16106706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 37256034 - 37255966
Alignment:
Q  149 gttcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    ||||| |||| |||||||||||||  |||||||||||||||| |||| ||| ||||| || ||||||||    
T  37256034 gttcaatggtcgaaccattgagtcgttggttgaaccgcatgattgaatcggtttgaatcggatgactcg 37255966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 19881999 - 19882062
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcgg 218  Q
    |||| |||||| ||||||| |||| ||||||||| ||||||||||||| ||||| || ||||||    
T  19881999 tggtcgaaccagtgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcgg 19882062  T

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Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 37032920 - 37032791
Alignment:
Q  91 taaaaatcatagttttaaaactcggacaggtcgtcgacttggtagagttattaggtca---gttcattggttgaaccattgagtcaatggttgaaccgca 187  Q
    |||||| |||||||||||||  ||||| |||| |||||| ||||  || ||  |||||   |||||||||| |||||| ||| ||| ||||||||| |||    
T  37032920 taaaaagcatagttttaaaaaccggaccggtcatcgactcggtaaggtcatcgggtcactggttcattggtcgaaccactgaatcactggttgaactgca 37032821  T
Q  188 tgactgaaccggattgaaccgaatgactcg 217  Q
    |||||||| | |||| || || ||||||||    
T  37032820 tgactgaatcagattaaatcggatgactcg 37032791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 37484468 - 37484527
Alignment:
Q  160 gaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||||||||| |||| |||||||||||  |||| ||||| ||||| ||||||||||    
T  37484468 gaaccattgagtcactggtcgaaccgcatgatggaactggattaaaccggatgactcggt 37484527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 3988765 - 3988811
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| ||| ||||| |||| |||||||||||||||||||||||||||    
T  3988765 tggtcgaatcattgggtcattggttgaaccgcatgactgaaccggat 3988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 35305339 - 35305293
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||    
T  35305339 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggat 35305293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 7501459 - 7501503
Alignment:
Q  175 tggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||||||||||||| ||||||||| || ||||||||||    
T  7501459 tggtcgaaccgcatgactgaatcggattgaatcggatgactcggt 7501503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 20907131 - 20907195
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||| |||||||||||||| |||| |||||||||||||| || ||| | || || ||||||||||    
T  20907131 tggtcgaaccattgagtcattggtagaaccgcatgactggactggaataaatcggatgactcggt 20907195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 29812371 - 29812319
Alignment:
Q  149 gttcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||||||||| |||||||||||||| |||||||| || | |||| ||||||||    
T  29812371 gttcattggtcgaaccattgagtcactggttgaatcgtacgactaaaccggat 29812319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 42345553 - 42345633
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggtccttataaaaaa 231  Q
    |||||||||||||||||||||||  | || |||||||||||  |||||| || || || |||| |||||| ||| ||||||    
T  42345553 tcattggttgaaccattgagtcaccgattaaaccgcatgacgaaaccgggttaaatcggatgattcggtcattaaaaaaaa 42345633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 17895 - 17853
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaacc 197  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  17895 tggtcgaaccattgagtcattggttgaaccgcatgactgaacc 17853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 64405 - 64467
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcg 217  Q
    |||| ||||||||| |||| ||||||||||||||||||||| |||||  ||||| ||||||||    
T  64405 tggtcgaaccattgggtcactggttgaaccgcatgactgaatcggatcaaaccggatgactcg 64467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 7920 - 7852
Alignment:
Q  151 tcattggttgaaccattgagtcaatggttgaaccgcatgactgaaccggattgaaccgaatgactcggt 219  Q
    |||||||| |||||| ||||||| |||||||| ||||||||||||||| ||| || || || |||||||    
T  7920 tcattggtcgaaccactgagtcattggttgaatcgcatgactgaaccgtattaaatcggataactcggt 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 7899 - 7945
Alignment:
Q  155 tggttgaaccattgagtcaatggttgaaccgcatgactgaaccggat 201  Q
    |||| |||||| ||||||  |||||||||||||||||||||||||||    
T  7899 tggtcgaaccactgagtcgttggttgaaccgcatgactgaaccggat 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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