View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10831_low_40 (Length: 255)
Name: NF10831_low_40
Description: NF10831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10831_low_40 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 29 - 255
Target Start/End: Original strand, 46287503 - 46287732
Alignment:
| Q |
29 |
ctatttgctccatatttaaccatccatagttaaagatggctatt---attataaatcaaattaccaatttaatatagctggctggaatgtgcaaattacc |
125 |
Q |
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| T |
46287503 |
ctatttgttcaatatttaaccatccaacgttaaagatggctattattattataaatcaaattaccaatttaatatagttggctggaatgtgcaaattacc |
46287602 |
T |
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| Q |
126 |
ctggctacttgccaacatagatgtcatgtcatgactacatataaagataataaaaattcaaccccaaatttaatagttccagttttggaaaacccacagc |
225 |
Q |
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| T |
46287603 |
ctggctacttgccaacatagatgtcatgtcatgactacatataaagataataaaaattcaaccccaaatttaatagttccagttttggaaaacccacaac |
46287702 |
T |
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| Q |
226 |
ctctcaaatagttttcttctccctaatttt |
255 |
Q |
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| T |
46287703 |
ctctcaaatagttttcttctccctaatttt |
46287732 |
T |
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