View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10833_1 (Length: 528)

Name: NF10833_1
Description: NF10833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10833_1
NF10833_1
[»] scaffold0004 (2 HSPs)
scaffold0004 (232-513)||(90489-90770)
scaffold0004 (1-128)||(90855-90982)
[»] scaffold0036 (1 HSPs)
scaffold0036 (323-458)||(28646-28781)
[»] chr4 (18 HSPs)
chr4 (202-270)||(27434682-27434750)
chr4 (202-259)||(4895044-4895101)
chr4 (205-281)||(1051192-1051268)
chr4 (202-270)||(24294539-24294607)
chr4 (202-270)||(24969572-24969640)
chr4 (202-264)||(4552857-4552919)
chr4 (202-279)||(20435162-20435239)
chr4 (319-384)||(24761924-24761989)
chr4 (202-279)||(42274514-42274591)
chr4 (202-270)||(1298984-1299052)
chr4 (313-384)||(5750378-5750450)
chr4 (202-270)||(23928598-23928666)
chr4 (202-264)||(530706-530768)
chr4 (202-264)||(55107596-55107658)
chr4 (202-270)||(21048736-21048804)
chr4 (202-270)||(24915825-24915893)
chr4 (202-270)||(32318751-32318819)
chr4 (202-270)||(35360748-35360816)
[»] chr2 (17 HSPs)
chr2 (202-270)||(39243014-39243082)
chr2 (202-270)||(7737137-7737205)
chr2 (300-411)||(18682273-18682385)
chr2 (202-270)||(34455957-34456025)
chr2 (202-270)||(9281378-9281446)
chr2 (202-270)||(24101863-24101931)
chr2 (202-270)||(27920644-27920712)
chr2 (202-270)||(43476018-43476086)
chr2 (202-270)||(45408697-45408765)
chr2 (202-256)||(12850587-12850641)
chr2 (337-411)||(22114812-22114886)
chr2 (202-270)||(1924011-1924079)
chr2 (206-270)||(2818742-2818806)
chr2 (202-270)||(3116948-3117016)
chr2 (378-434)||(19005866-19005922)
chr2 (202-270)||(20892957-20893025)
chr2 (202-270)||(23835949-23836017)
[»] chr1 (26 HSPs)
chr1 (301-367)||(10683551-10683617)
chr1 (313-374)||(9331969-9332030)
chr1 (323-390)||(16572714-16572781)
chr1 (202-264)||(3607766-3607828)
chr1 (202-279)||(50627203-50627280)
chr1 (202-270)||(957661-957729)
chr1 (202-270)||(2854563-2854631)
chr1 (202-270)||(6079456-6079524)
chr1 (202-270)||(9978082-9978150)
chr1 (202-270)||(23698533-23698601)
chr1 (202-270)||(40647190-40647258)
chr1 (202-270)||(48645045-48645113)
chr1 (202-270)||(48954245-48954313)
chr1 (202-270)||(50856352-50856420)
chr1 (202-279)||(5189541-5189618)
chr1 (202-259)||(19954953-19955010)
chr1 (202-270)||(1387850-1387918)
chr1 (202-270)||(2125101-2125169)
chr1 (202-258)||(4299435-4299491)
chr1 (202-270)||(15324699-15324767)
chr1 (350-394)||(18350404-18350448)
chr1 (202-270)||(26208497-26208565)
chr1 (202-270)||(27240955-27241023)
chr1 (203-279)||(36880584-36880660)
chr1 (202-270)||(47940601-47940669)
chr1 (202-270)||(51276726-51276794)
[»] chr3 (30 HSPs)
chr3 (202-259)||(157010-157067)
chr3 (202-270)||(50099506-50099574)
chr3 (202-264)||(404117-404179)
chr3 (313-374)||(29858294-29858356)
chr3 (202-270)||(44920677-44920745)
chr3 (202-269)||(43150552-43150619)
chr3 (202-264)||(10441295-10441357)
chr3 (202-279)||(36657455-36657532)
chr3 (202-270)||(10254641-10254709)
chr3 (313-384)||(18680416-18680488)
chr3 (202-270)||(25446322-25446390)
chr3 (202-270)||(26906526-26906594)
chr3 (202-270)||(36278787-36278855)
chr3 (202-270)||(45487871-45487939)
chr3 (202-270)||(46664248-46664316)
chr3 (203-259)||(46679334-46679390)
chr3 (202-264)||(12789678-12789740)
chr3 (202-259)||(44611423-44611480)
chr3 (202-259)||(45712945-45713002)
chr3 (202-270)||(3970522-3970590)
chr3 (202-270)||(4072304-4072372)
chr3 (202-270)||(8831813-8831881)
chr3 (202-270)||(12838149-12838217)
chr3 (202-270)||(13078194-13078262)
chr3 (202-270)||(21969188-21969256)
chr3 (202-270)||(21991624-21991692)
chr3 (202-270)||(22101237-22101305)
chr3 (202-270)||(32237425-32237493)
chr3 (202-270)||(43639112-43639180)
chr3 (202-270)||(55340324-55340392)
[»] chr7 (18 HSPs)
chr7 (202-270)||(40358187-40358255)
chr7 (202-264)||(9285751-9285813)
chr7 (202-264)||(9289818-9289880)
chr7 (202-270)||(20184269-20184337)
chr7 (202-282)||(31521544-31521624)
chr7 (202-270)||(37093840-37093908)
chr7 (202-256)||(38989116-38989170)
chr7 (202-279)||(30594765-30594842)
chr7 (202-279)||(38883293-38883370)
chr7 (202-270)||(24836092-24836160)
chr7 (202-270)||(34052351-34052419)
chr7 (202-270)||(35339309-35339377)
chr7 (202-264)||(31231651-31231713)
chr7 (202-264)||(33749716-33749778)
chr7 (202-259)||(10936512-10936569)
chr7 (202-270)||(30259097-30259165)
chr7 (202-270)||(39143743-39143811)
chr7 (202-282)||(39617860-39617940)
[»] chr6 (13 HSPs)
chr6 (202-270)||(4890511-4890579)
chr6 (202-270)||(885457-885525)
chr6 (204-259)||(17279601-17279656)
chr6 (202-279)||(11687165-11687242)
chr6 (202-270)||(7808681-7808749)
chr6 (202-270)||(13439768-13439836)
chr6 (202-270)||(15546704-15546772)
chr6 (202-270)||(21379972-21380040)
chr6 (323-390)||(32854952-32855019)
chr6 (202-264)||(14393636-14393698)
chr6 (202-255)||(3369057-3369110)
chr6 (202-270)||(13172605-13172672)
chr6 (204-264)||(31764362-31764422)
[»] chr5 (12 HSPs)
chr5 (206-270)||(13754322-13754386)
chr5 (202-279)||(15855915-15855992)
chr5 (202-279)||(16473027-16473104)
chr5 (202-279)||(35420634-35420711)
chr5 (202-270)||(12744898-12744966)
chr5 (202-270)||(20476503-20476571)
chr5 (202-264)||(21262015-21262077)
chr5 (202-279)||(12807983-12808060)
chr5 (202-259)||(37552350-37552407)
chr5 (202-259)||(37655194-37655251)
chr5 (202-270)||(1138631-1138699)
chr5 (208-256)||(1384373-1384421)
[»] scaffold0653 (1 HSPs)
scaffold0653 (202-264)||(3430-3492)
[»] scaffold0188 (1 HSPs)
scaffold0188 (202-270)||(7158-7226)
[»] chr8 (10 HSPs)
chr8 (202-270)||(17426659-17426727)
chr8 (202-282)||(23940823-23940903)
chr8 (202-270)||(29780990-29781058)
chr8 (202-264)||(8210395-8210457)
chr8 (202-279)||(38520090-38520167)
chr8 (202-270)||(4262007-4262075)
chr8 (202-270)||(11828627-11828695)
chr8 (202-270)||(38629546-38629614)
chr8 (202-270)||(40891085-40891153)
chr8 (202-270)||(40393795-40393862)
[»] scaffold0122 (1 HSPs)
scaffold0122 (202-270)||(45906-45974)
[»] scaffold0107 (1 HSPs)
scaffold0107 (202-270)||(51135-51203)


Alignment Details
Target: scaffold0004 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 232 - 513
Target Start/End: Complemental strand, 90770 - 90489
Alignment:
Q  232 aggaaattatgataaatttagttaagaatcataagaaaatcatttaagaaaatgtcaagaacctatggtaaacactctcttattaaagttttaagatgaa 331  Q
    ||||||| ||| |||||||||||||||| ||||| |||||||||||| |||||| |||||||||||  |||||||||||||||||||||| |||||||||    
T  90770 aggaaatcatggtaaatttagttaagaaccataaaaaaatcatttaaaaaaatgacaagaacctataataaacactctcttattaaagttctaagatgaa 90671  T
Q  332 cctatgtttatttgttgaaatttattaatgcaatttctttattgagttatgattcaagtcttaaaaagatttcaattgttccgaacgtaatgattttaga 431  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  90670 cctatgtttatttgttggaatttattaatgcaatttctttattgagttatgatttaagtcttaaaaaaatttcaattgttccgaacgtaataattttaga 90571  T
Q  432 cccatacgcacaaataagccctaattggatctaattagactataaatagaaataagaccaatgacttatctatgtatgatcc 513  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90570 cccatacgcacaaataagccctaattgtatctaattagactataaatagaaataagaccaatgacttatctatgtatgatcc 90489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 90982 - 90855
Alignment:
Q  1 gttcaatgccctctaactagcctgcatatttctttctttgtccaaaatgtcactagtgttggcaaataatgggattgtggagtaacattcactcttgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90982 gttcaatgccctctaactagcctgcatatttctttctttgtccaaaaagtcactagtgttggcaaataatgggattgtggagtaacattcactcttgaat 90883  T
Q  101 gggtggataccaacaactctctacaaag 128  Q
    |||||||||||||||||||| |||||||    
T  90882 gggtggataccaacaactctttacaaag 90855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 458
Target Start/End: Complemental strand, 28781 - 28646
Alignment:
Q  323 taagatgaacctatgtttatttgttgaaatttattaatgcaatttctttattgagttatgattcaagtcttaaaaagatttcaattgttccgaacgtaat 422  Q
    |||||||||||| | |||||||| | |||| ||||||||||||||||||||| | |||||||| || ||||| | |  ||||||||||||  || |||||    
T  28781 taagatgaacctttatttatttggtaaaatctattaatgcaatttctttattcatttatgatttaaatcttatataattttcaattgttctaaatgtaat 28682  T
Q  423 gattttagacccatacgcacaaataagccctaattg 458  Q
    | ||||||||||  | |||||||||||| |||||||    
T  28681 gcttttagaccccaaggcacaaataagctctaattg 28646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 27434682 - 27434750
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||||||| |||||||||||||||| |||| |||||    
T  27434682 ataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaagaaccatacgaaaa 27434750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 4895044 - 4895101
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| |||||||| || |||||||||| ||| ||||||||||||||||    
T  4895044 ataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaa 4895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 1051268 - 1051192
Alignment:
Q  205 acaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaagaa 281  Q
    ||||||||| | ||||||||||| |||| ||||| || ||||||||| |||||||| ||| ||||||||| ||||||    
T  1051268 acaaactttaagaaaattataaatttgaagaaatcataataaatttaattaagaattatacgaaaatcatgtaagaa 1051192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 24294539 - 24294607
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||  || |||||||||||||| | |||||||||||||| |||| |||||    
T  24294539 ataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 24969640 - 24969572
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||| | |||||||||||||| |||| |||||    
T  24969640 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 24969572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 4552857 - 4552919
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||||| |||||||||||||| ||||    
T  4552857 ataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccata 4552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 20435239 - 20435162
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    ||||||||||| || ||||||||  | |||||||||| ||||| |||||||||||||| |||| ||||| ||| ||||    
T  20435239 ataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacgaaaagcatctaag 20435162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 24761924 - 24761989
Alignment:
Q  319 gttttaagatgaacctatgtttatttgttgaaatttattaatgcaatttctttattgagttatgat 384  Q
    ||||||||||||||||   ||||||||||  |||||||||||||| |||||||||| | |||||||    
T  24761924 gttttaagatgaacctccatttatttgttagaatttattaatgcagtttctttattcaattatgat 24761989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 42274591 - 42274514
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| ||||| ||| ||||    
T  42274591 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaag 42274514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 1298984 - 1299052
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | |||||||||||||| ||||||||||    
T  1298984 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccataagaaaa 1299052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 5750450 - 5750378
Alignment:
Q  313 attaaagttttaagatgaacctatgtttatttgttgaaa-tttattaatgcaatttctttattgagttatgat 384  Q
    |||| |||| ||||||| |||| | |||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  5750450 attagagttctaagatgtacctctatttatttgttaaaaatttattaatgcaatttatttatttagttatgat 5750378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 23928666 - 23928598
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||| ||||| ||||||||  | |||||||||| ||| | ||||||||||||||||||| |||||    
T  23928666 ataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaa 23928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 530768 - 530706
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| ||||    
T  530768 ataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaagaaccata 530706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 55107596 - 55107658
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||| |||||||||| ||||| ||||    
T  55107596 ataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaagaaccata 55107658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 21048804 - 21048736
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    ||||||||||| || ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  21048804 ataacaaacttcgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 21048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 24915893 - 24915825
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | |||||||||||||| |||| |||||    
T  24915893 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 24915825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 32318819 - 32318751
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  |  ||||||||| ||| | |||||||||||||| |||| |||||    
T  32318819 ataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaaccatacgaaaa 32318751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 35360748 - 35360816
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| |||||    
T  35360748 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaa 35360816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 39243082 - 39243014
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||| |||||    
T  39243082 ataacaaactttgataaaatcataaatttgatgaaatcacgataaatttagttaagaatcatacgaaaa 39243014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 7737137 - 7737205
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||    |||||||||| ||| ||||||||||||||||||||| |||||    
T  7737137 ataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaagaatcatacgaaaa 7737205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 411
Target Start/End: Complemental strand, 18682385 - 18682273
Alignment:
Q  300 taaacactctcttattaaagttttaagatgaacctatgtttatttgttgaaatttattaatgcaatttc-tttattgagttatgattcaagtcttaaaaa 398  Q
    ||||||| |||| ||||  ||| |||||||||||| |||||||||||| ||| |||||||||||||| | ||| || | |||||||| |||||||| | |    
T  18682385 taaacaccctctaattagggttctaagatgaacctttgtttatttgttaaaagttattaatgcaattacatttgttcaattatgatttaagtcttatata 18682286  T
Q  399 gatttcaattgtt 411  Q
      |||||||||||    
T  18682285 tttttcaattgtt 18682273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 34455957 - 34456025
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||| | |||||||||||||||| |||||| ||| ||| |||| |||||    
T  34455957 ataacaaactttgagaaaattatagatttgaggaaattatgatgaatttaattaggaaccatacgaaaa 34456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 9281446 - 9281378
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  9281446 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatatgaaaa 9281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 24101931 - 24101863
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| || ||||||||||||| |||| |||||    
T  24101931 ataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaagaaccatacgaaaa 24101863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 27920644 - 27920712
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  27920644 ataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 27920712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 43476018 - 43476086
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||| ||||||||| |||||||| || |||||||||| ||| | |||||||||||||| |||| |||||    
T  43476018 ataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 43476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 45408697 - 45408765
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| |||||||| ||||||| |||| |||||    
T  45408697 ataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaaccatacgaaaa 45408765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 12850641 - 12850587
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaa 256  Q
    |||||||||||||| ||||||||  | |||||||||| ||| |||||||||||||    
T  12850641 ataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaa 12850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 411
Target Start/End: Complemental strand, 22114886 - 22114812
Alignment:
Q  337 gtttatttgttgaaatttattaatgcaatttctttattgagttatgattcaagtcttaaaaagatttcaattgtt 411  Q
    |||||||||||  |||||||||||| |||||||||||| | |||||||| || ||||| | |  |||||||||||    
T  22114886 gtttatttgtttgaatttattaatgaaatttctttatttaattatgatttaactcttatataattttcaattgtt 22114812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 1924079 - 1924011
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | | |||||||| ||| | |||||||||||||| |||| |||||    
T  1924079 ataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaa 1924011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 2818742 - 2818806
Alignment:
Q  206 caaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  2818742 caaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 2818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 3116948 - 3117016
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| || || |||||||||||||| |||| |||||    
T  3116948 ataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaaccatacgaaaa 3117016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 19005922 - 19005866
Alignment:
Q  378 ttatgattcaagtcttaaaaagatttcaattgttccgaacgtaatgattttagaccc 434  Q
    ||||||||||||||||| | || |||||||| || |||| |||||| ||||||||||    
T  19005922 ttatgattcaagtcttacatagttttcaattatttcgaatgtaatgcttttagaccc 19005866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 20892957 - 20893025
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||| ||||||||  ||  ||||||||||||||||| |||||    
T  20892957 ataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaagaatcatacgaaaa 20893025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 23835949 - 23836017
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| ||||||| ||||| || |||| |||||    
T  23835949 ataacaaactttgagaaaattatggatttgaggaaatcatggtaaattttgttaaaaaccatacgaaaa 23836017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 10683551 - 10683617
Alignment:
Q  301 aaacactctcttattaaagttttaagatgaacctatgtttatttgttgaaatttattaatgcaattt 367  Q
    |||||| |||| ||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  10683551 aaacaccctctgattaaggttctaagatgaacctttgtttatttgttggaatttattaatgcaattt 10683617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 9331969 - 9332030
Alignment:
Q  313 attaaagttttaagatgaacctatgtttatttgttgaaatttattaatgcaatttctttatt 374  Q
    |||| |||| |||||||||||| ||||||||||||  ||||| |||||||||||||||||||    
T  9331969 attagagttctaagatgaacctctgtttatttgttacaattttttaatgcaatttctttatt 9332030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 16572781 - 16572714
Alignment:
Q  323 taagatgaacctatgtttatttgttgaaatttattaatgcaatttctttattgagttatgattcaagt 390  Q
    ||||||||| || ||||||||||||  |||| ||||||| |||||||||||| |||||||||| ||||    
T  16572781 taagatgaaactttgtttatttgttcgaattcattaatgtaatttctttattcagttatgatttaagt 16572714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 3607828 - 3607766
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||||| |||||||||||||| ||||    
T  3607828 ataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccata 3607766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 50627203 - 50627280
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  50627203 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatataag 50627280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 957661 - 957729
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | ||||||||||||||||||| |||||    
T  957661 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 957729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 2854631 - 2854563
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  2854631 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 2854563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 6079456 - 6079524
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  6079456 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 6079524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 9978150 - 9978082
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||  | ||||||||||||||||||| |||||    
T  9978150 ataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaatcatacgaaaa 9978082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 23698601 - 23698533
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  23698601 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 23698533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40647190 - 40647258
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | ||||||||||| ||||||| |||||    
T  40647190 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaatcatacgaaaa 40647258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 48645113 - 48645045
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| |||||    
T  48645113 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaagcatacgaaaa 48645045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 48954313 - 48954245
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  48954313 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatatgaaaa 48954245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 50856420 - 50856352
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||| ||||| ||||||||  |||||||||||| ||| | ||||||| ||||||||||| |||||    
T  50856420 ataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaa 50856352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 5189541 - 5189618
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| ||||| ||| ||||    
T  5189541 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaag 5189618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 19955010 - 19954953
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | ||||||||||||||    
T  19955010 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 19954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 1387850 - 1387918
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||| ||||||||| |||||||| || |||||||||| ||| ||  |||||||||||| |||| |||||    
T  1387850 ataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaagaaccatacgaaaa 1387918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 2125169 - 2125101
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||||| || |  |||| ||| | |||||||||||||| |||| |||||    
T  2125169 ataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaagaaccatacgaaaa 2125101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 4299491 - 4299435
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaaga 258  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||    
T  4299491 ataacaaactttgagaaaattatggatttgaggaaataatggtgaatttagttaaga 4299435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 15324699 - 15324767
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||  | |||||||||||||| |||| |||||    
T  15324699 ataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 15324767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 18350404 - 18350448
Alignment:
Q  350 aatttattaatgcaatttctttattgagttatgattcaagtctta 394  Q
    ||||||||||||||||||||||||| | |||| ||| ||||||||    
T  18350404 aatttattaatgcaatttctttattcacttattatttaagtctta 18350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 26208497 - 26208565
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||| ||||||||| | ||||||||| |||| |||| |||||    
T  26208497 ataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcagaaccatacgaaaa 26208565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 27241023 - 27240955
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | |||||||||||||| |||| |||||    
T  27241023 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 27240955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 36880584 - 36880660
Alignment:
Q  203 taacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    ||||||||||||| ||||||||  | |||||||||| ||| ||  |||||||||||| |||| ||||| ||| ||||    
T  36880584 taacaaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaag 36880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 47940669 - 47940601
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | | |||||||| ||| | |||||||||||||| |||| |||||    
T  47940669 ataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaa 47940601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 51276794 - 51276726
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||| ||||||||| ||||||||  | |||||||||| || || |||||||||||||| |||| |||||    
T  51276794 ataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaaccatacgaaaa 51276726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 157067 - 157010
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||    
T  157067 ataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaagaa 157010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 50099506 - 50099574
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||||||| | |||||||||||||| |||| |||||    
T  50099506 ataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 50099574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 404117 - 404179
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||| ||||    
T  404117 ataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaagaaccata 404179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 29858356 - 29858294
Alignment:
Q  313 attaaagttttaagatgaacct-atgtttatttgttgaaatttattaatgcaatttctttatt 374  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||||||||| |||||    
T  29858356 attagagttttaagatgaaatttatgtttatttgttgaaatttattaatgcaatttcattatt 29858294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 44920745 - 44920677
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||| ||||||||| ||||||||||| ||||| |||| ||  |||||||||||||||| ||||||||||    
T  44920745 ataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaaccataagaaaa 44920677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 43150552 - 43150619
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaa 269  Q
    |||||||||||||| |||||||| || |||||||||| ||  | ||||||||||||||||||| ||||    
T  43150552 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaatcatacgaaa 43150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 10441357 - 10441295
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||||||||    
T  10441357 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaatcata 10441295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 36657532 - 36657455
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  36657532 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 36657455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 10254641 - 10254709
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||||| |||||||||||||| |||| |||||    
T  10254641 ataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaagaaccatacgaaaa 10254709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 18680488 - 18680416
Alignment:
Q  313 attaaagttttaagatgaacctatgtttatttgttgaaa-tttattaatgcaatttctttattgagttatgat 384  Q
    |||| |||| ||||||| |||| | |||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  18680488 attagagttctaagatgtacctctatttatttgttaaaaatttattaatgcaatttatttatttagttatgat 18680416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 25446322 - 25446390
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  25446322 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 25446390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 26906526 - 26906594
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  26906526 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 26906594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 36278855 - 36278787
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||  | |||||||||||||| |||| |||||    
T  36278855 ataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 36278787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 45487871 - 45487939
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    ||||||||| |||| |||||||| || |||||||||| ||| | |||||||||||||| |||| |||||    
T  45487871 ataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 45487939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 46664248 - 46664316
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||||||||||  |||  |||| ||||||| |||||    
T  46664248 ataacaaactttgagaaaattatgaatttgaggaaattatgatattttttattaaaaatcatacgaaaa 46664316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 46679334 - 46679390
Alignment:
Q  203 taacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    ||||||||||||| ||||||||  | |||||||||||||| | ||||||||||||||    
T  46679334 taacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaa 46679390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 12789678 - 12789740
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| |||||||| || |||||||||| ||| | |||||| ||||||| ||||    
T  12789678 ataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaaccata 12789740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 44611480 - 44611423
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| |||||||| || |||| ||||| ||| | ||||||||||||||    
T  44611480 ataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaa 44611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 45713002 - 45712945
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||||||||||||    |||||||||| ||| | ||||||||||||||    
T  45713002 ataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaagaa 45712945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 3970590 - 3970522
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| |||||    
T  3970590 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaa 3970522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 4072372 - 4072304
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | | |||||||| ||| | |||||||||||||| |||| |||||    
T  4072372 ataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaa 4072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 8831813 - 8831881
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||| ||||| ||| | |||||||||||||| |||| |||||    
T  8831813 ataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaagaaccatacgaaaa 8831881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 12838149 - 12838217
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | ||||||||||| || |||| |||||    
T  12838149 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaaccatacgaaaa 12838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 13078262 - 13078194
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| |||||    
T  13078262 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaa 13078194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 21969256 - 21969188
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| |||||    
T  21969256 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaa 21969188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 21991692 - 21991624
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||||||||| |||| |||||    
T  21991692 ataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatacgaaaa 21991624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 22101237 - 22101305
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||  | |||||||||||||| |||| |||||    
T  22101237 ataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 22101305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 32237493 - 32237425
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  |  |||| |||| ||| |||||||||||||||| |||| |||||    
T  32237493 ataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaagaaccatacgaaaa 32237425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 43639180 - 43639112
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||| ||||| ||| | ||||| ||||||||||||| |||||    
T  43639180 ataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaagaatcatacgaaaa 43639112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 55340392 - 55340324
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | ||| ||||||||||||||| |||||    
T  55340392 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaatcatacgaaaa 55340324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40358187 - 40358255
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||| | ||||||||||||||||||| |||||    
T  40358187 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaatcataggaaaa 40358255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 9285813 - 9285751
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||||||||||||||| |||||||||| ||| | |||||| ||||||| ||||    
T  9285813 ataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccata 9285751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 9289880 - 9289818
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||||||||||||||| |||||||||| ||| | |||||| ||||||| ||||    
T  9289880 ataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccata 9289818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 20184337 - 20184269
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | ||||||||||||||||||| |||||    
T  20184337 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaa 20184269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 31521624 - 31521544
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaagaaa 282  Q
    |||| ||||||||| |||||||| || ||||| |||| ||| |||||||||||||||| |||| ||||| ||| |||||||    
T  31521624 ataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaagcatctaagaaa 31521544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 37093840 - 37093908
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||||| |||||||||| ||| | ||||||||||| || |||| |||||    
T  37093840 ataacaaactttgagaaaattataaatttgaggaaatcatggtgaatttagttaaaaaccatacgaaaa 37093908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 38989170 - 38989116
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaa 256  Q
    |||||||||||||| ||||||||| | || || ||||||||||||||||||||||    
T  38989170 ataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaa 38989116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 30594765 - 30594842
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| ||||| ||| ||||    
T  30594765 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaag 30594842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 38883293 - 38883370
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  38883293 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 38883370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 24836092 - 24836160
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  24836092 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 24836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 34052351 - 34052419
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||| | ||||||| |||||| |||| |||||    
T  34052351 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaagaaccatacgaaaa 34052419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 35339377 - 35339309
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||| ||||| ||||| |||||||||||||| |||| |||||    
T  35339377 ataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaagaaccatacgaaaa 35339309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 31231713 - 31231651
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| ||||    
T  31231713 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccata 31231651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 33749716 - 33749778
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||| ||||||||| |||||||| || || ||||||| ||||| |||||||||||||| ||||    
T  33749716 ataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaagaaccata 33749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 10936569 - 10936512
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| ||||||||| | |||||||| | ||| | ||||||||||||||    
T  10936569 ataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaagaa 10936512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 30259165 - 30259097
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | |||||||||||||| |||| |||||    
T  30259165 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccataggaaaa 30259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 39143811 - 39143743
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| || |||||  | |||||||||||||| | |||||||| ||||| |||| |||||    
T  39143811 ataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaa 39143743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 39617940 - 39617860
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaagaaa 282  Q
    |||||||||||||| ||||||||  | | |||||||| ||| | |||||||||||||| |||| ||| | ||| |||||||    
T  39617940 ataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaagaaccatacgaagaacatctaagaaa 39617860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 4890579 - 4890511
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||| |||| |||||    
T  4890579 ataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaaccatacgaaaa 4890511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 885457 - 885525
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||||| ||||||||||||||||||| |||||    
T  885457 ataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaagaatcataggaaaa 885525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 17279601 - 17279656
Alignment:
Q  204 aacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    ||||||||||||||||||||| || |||| ||||| ||||| ||||||||||||||    
T  17279601 aacaaactttgataaaattatgaatttgaagaaatcatgatgaatttagttaagaa 17279656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 11687242 - 11687165
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  11687242 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 11687165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 7808681 - 7808749
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||| | |||||||||| ||| ||  |||||||||||| |||| |||||    
T  7808681 ataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaaccatacgaaaa 7808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 13439768 - 13439836
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  13439768 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 15546704 - 15546772
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| |||||||| ||||||| |||| |||||    
T  15546704 ataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaaccatacgaaaa 15546772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 21380040 - 21379972
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    ||||||||| |||| |||||||| || |||||||||| ||| | |||||||||||||| |||| |||||    
T  21380040 ataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 21379972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 32854952 - 32855019
Alignment:
Q  323 taagatgaacctatgtttatttgttgaaatttattaatgcaatttctttattgagttatgattcaagt 390  Q
    |||||||||||| | ||||||| ||| | ||||||||||||| || |||||| |||||||||| ||||    
T  32854952 taagatgaacctttatttatttattggattttattaatgcaagttgtttattcagttatgatttaagt 32855019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 14393636 - 14393698
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| ||||    
T  14393636 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccata 14393698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 3369057 - 3369110
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagtta 255  Q
    |||||||||||||| |||||||| || |||||||||| ||| | ||||||||||    
T  3369057 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagtta 3369110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 13172672 - 13172605
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| || || |||||||||||||| |||| |||||    
T  13172672 ataacaaactttgagaaaattatggatttgaggaaatgat-atgaatttagttaagaaccatacgaaaa 13172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 31764422 - 31764362
Alignment:
Q  204 aacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||| |||||||| || ||||| |||| ||| | |||||||||||||| ||||    
T  31764422 aacaaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaagaaccata 31764362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 13754386 - 13754322
Alignment:
Q  206 caaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||| |||||||| || |||||||||||||| | ||||||||||||||||||| |||||    
T  13754386 caaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaatcatacgaaaa 13754322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 15855915 - 15855992
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  15855915 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 15855992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 16473027 - 16473104
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  16473027 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 16473104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 35420711 - 35420634
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||  |||||||||||| |||| ||||| ||| ||||    
T  35420711 ataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatacgaaaagcatctaag 35420634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 12744898 - 12744966
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || |||||||||| ||| | |||||||| || ||||||| |||||    
T  12744898 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagtcaaaaatcatacgaaaa 12744966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 20476503 - 20476571
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||| ||||| ||||||||  | |||||||||| ||||| |||||||||||||| |||| |||||    
T  20476503 ataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacgaaaa 20476571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 21262015 - 21262077
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| |||||| |  | |||||||||| ||||| |||||||||||||| ||||    
T  21262015 ataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaagaaccata 21262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 12807983 - 12808060
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| ||||||||  | || ||||||| ||| | |||||||| |||||||||| ||||| || |||||    
T  12807983 ataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaatcatacgaaaaacacttaag 12808060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 37552407 - 37552350
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| |||||||| || |||||||| | ||| | ||||||||||||||    
T  37552407 ataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaa 37552350  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 37655251 - 37655194
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaa 259  Q
    |||||||||||||| |||||||| || |||||||| | ||| | ||||||||||||||    
T  37655251 ataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaa 37655194  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 1138631 - 1138699
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| || || |||||||||||||| |||| |||||    
T  1138631 ataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaaccatacgaaaa 1138699  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 1384421 - 1384373
Alignment:
Q  208 aactttgataaaattataaacttgaggaaattatgataaatttagttaa 256  Q
    |||||||| ||||||||| | |||||||||| || ||||||||||||||    
T  1384421 aactttgagaaaattatagatttgaggaaatcataataaatttagttaa 1384373  T

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Target: scaffold0653 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 3492 - 3430
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||||||||||||||| |||||||||| ||| | |||||| ||||||| ||||    
T  3492 ataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccata 3430  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 7158 - 7226
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||||| |||||||||||||| |||| |||||    
T  7158 ataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacgaaaa 7226  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 17426727 - 17426659
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||| | |||||||||| ||| | |||||||||||||| |||| |||||    
T  17426727 ataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 17426659  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 23940903 - 23940823
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaagaaa 282  Q
    |||||||||||||| |||||||   | |||||||||| ||| | ||||||||||||||||||| ||||| || ||||||||    
T  23940903 ataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacttaagaaa 23940823  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 29781058 - 29780990
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||||||| ||||||||||||| || |||| |||||    
T  29781058 ataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaaaccatacgaaaa 29780990  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 8210395 - 8210457
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcata 264  Q
    |||||||||||||| ||||||||  | |||||||||| ||||| ||||| |||||||||||||    
T  8210395 ataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaagaatcata 8210457  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 38520090 - 38520167
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaatcatttaag 279  Q
    |||||||||||||| |||||||| || |||||||||| ||| | ||||||||||| || |||| ||||| || |||||    
T  38520090 ataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaaaacatacgaaaagcacttaag 38520167  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 4262075 - 4262007
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  |||||||||||| ||  | |||||||||||||| |||| |||||    
T  4262075 ataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacgaaaa 4262007  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 11828695 - 11828627
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||| ||  | |||||||||||||| | |||||||||||||| |||| |||||    
T  11828695 ataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 11828627  T

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Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 38629546 - 38629614
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||| ||||||||| |||||||| || |||||||||| ||| | |||||||||||||| |||| |||||    
T  38629546 ataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 38629614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40891085 - 40891153
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | |||||||||| ||| | |||||||||||||| |||| |||||    
T  40891085 ataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 40891153  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 40393795 - 40393862
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||| ||||| ||||||| ||| |||||||||||||| | ||||||| |||||| ||||| ||||    
T  40393795 ataacaaattttgagaaaatta-aaatttgaggaaattatggtgaatttagctaagaaccataataaaa 40393862  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 45906 - 45974
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| ||||||||  | ||||| |||| ||| | |||||||||||||| ||||||||||    
T  45906 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccataagaaaa 45974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 51135 - 51203
Alignment:
Q  202 ataacaaactttgataaaattataaacttgaggaaattatgataaatttagttaagaatcataagaaaa 270  Q
    |||||||||||||| |||||||| || || ||||||| ||  | |||||||||||||| |||| |||||    
T  51135 ataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaagaaccatatgaaaa 51203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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