View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10833_3 (Length: 392)

Name: NF10833_3
Description: NF10833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10833_3
NF10833_3
[»] chr6 (19 HSPs)
chr6 (41-327)||(31564838-31565117)
chr6 (130-350)||(33414568-33414788)
chr6 (130-350)||(33258194-33258416)
chr6 (155-350)||(33269541-33269740)
chr6 (130-350)||(33395052-33395274)
chr6 (128-300)||(33278972-33279139)
chr6 (130-234)||(33293090-33293194)
chr6 (223-339)||(33384040-33384156)
chr6 (28-127)||(33385314-33385414)
chr6 (33-127)||(24632066-24632161)
chr6 (41-127)||(33259583-33259670)
chr6 (173-297)||(33280358-33280482)
chr6 (32-127)||(33416152-33416248)
chr6 (28-83)||(9165228-9165283)
chr6 (293-337)||(33293034-33293078)
chr6 (130-176)||(28873045-28873091)
chr6 (41-82)||(33282241-33282282)
chr6 (41-82)||(33398042-33398083)
chr6 (41-82)||(33408952-33408993)
[»] chr2 (1 HSPs)
chr2 (130-350)||(17447760-17447981)
[»] scaffold0428 (5 HSPs)
scaffold0428 (130-350)||(2315-2537)
scaffold0428 (128-300)||(15114-15281)
scaffold0428 (41-127)||(3704-3791)
scaffold0428 (173-297)||(13771-13895)
scaffold0428 (41-82)||(11970-12011)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 31564838 - 31565117
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtctattctgtcccctttgaattgcagcaactatatcaccaacacttgcatgaaaaggcgc 140  Q
    ||||||| |||||||||||||| ||| || |||||||||||||||||   |||||||| ||||||||||       |||||||||| |||||||||||||    
T  31564838 tatctttaaattcttacataagatttctattttttaaatgtctattccaccccctttggattgcagcaa-------accaacacttacatgaaaaggcgc 31564930  T
Q  141 aagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacat 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  31564931 aagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcggtacatacattcacgattcacgcat 31565030  T
Q  241 tagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgca 327  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31565031 tagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagttggttcatgatcttgcaatgca 31565117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 130 - 350
Target Start/End: Complemental strand, 33414788 - 33414568
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac 229  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||  |||||||||||||||| |||||||||||||    
T  33414788 tgaaaaggcgcaagcatatctcaggaaaaagggtctctcatccgctgataagaaatccggaagactagcagctgaaggaagaatcggtacatacattcac 33414689  T
Q  230 gattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaag 329  Q
    ||| |||  ||| || |||||||||||||||| |||| |||||||||| | || ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33414688 gatgcacgtattggtgttctaattgaagtgaactgtgaaacggactttgttggcagaagtgagaaattcaaggagttggttgatgatcttgcaatgcaag 33414589  T
Q  330 ttgctgcttgtccacaggttc 350  Q
    |||||||||||||||||||||    
T  33414588 ttgctgcttgtccacaggttc 33414568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 350
Target Start/End: Complemental strand, 33258416 - 33258194
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata-cattca 228  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||||| ||||||||||| |||| ||  |  ||||||||||||| |||||| || ||     
T  33258416 tgaaaagccgcaagcatatctcatcaaaaagggtctctcatccgctgataagaaatccgggagactagcagaagaaggaagaatcggtacatatcactcg 33258317  T
Q  229 cgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa 328  Q
    ||||||||||||| || ||||||||||||||||  ||| ||| |||||| | || |||||||||||||| |||||||| ||| | |||||||||||||||    
T  33258316 cgattcacacattggtgttctaattgaagtgaacggtgaaaccgactttgttggcagaagtgagaaatttaaggagttggttgacgatcttgcaatgcaa 33258217  T
Q  329 gttgctgctt-gtccacaggttc 350  Q
    || |||  || ||||||||||||    
T  33258216 gtagctttttggtccacaggttc 33258194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 350
Target Start/End: Complemental strand, 33269740 - 33269541
Alignment:
Q  155 aaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata----cattcacgattcacacattagtattcta 250  Q
    ||||||||||||||||||||||| ||||| || | ||||| ||  ||||||| |||||||| ||||||    ||||||| || ||  |||  || |||||    
T  33269740 aaaaagggtctctcatccgctgataagaagtctgcaagactagcagctgaagaaagaatcggtacatatatacattcacaatgcatgcatcggtgttcta 33269641  T
Q  251 attgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaagttgctgcttgtccacaggttc 350  Q
    ||||||||||| |||| ||| |||||| | || |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  33269640 attgaagtgaactgtgaaaccgactttgttggcagaagtgagaaattcaagaagttggttgatgatcttgcaatgcaagttgctgcttgtccacaggttc 33269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 130 - 350
Target Start/End: Complemental strand, 33395274 - 33395052
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac 229  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||| ||||||||||||||||| || | ||  |||||||||||||||| || ||||||| ||    
T  33395274 tgaaaaggcccaatcataccttagaacaaagggtctctcatcagctgacaagaaatccggtaggctagcagctgaaggaagaatcggtaaatacattgac 33395175  T
Q  230 gattcacacattagtattctaattgaagtgaaatgtggaacggactttatcgg--tagaagtgagaaattcaaggagtttgttcatgatcttgcaatgca 327  Q
    ||| ||| |||   | |||| ||||||||||| |||| ||| |||||| | ||   |||||||| | |||||||||||| |||  ||||||| |||||||    
T  33395174 gatgcacgcatctatgttctgattgaagtgaactgtgaaaccgactttgttggcacagaagtgatagattcaaggagttggttgctgatctttcaatgca 33395075  T
Q  328 agttgctgcttgtccacaggttc 350  Q
    |   |||||||||||||||||||    
T  33395074 ataggctgcttgtccacaggttc 33395052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 300
Target Start/End: Complemental strand, 33279139 - 33278972
Alignment:
Q  128 catgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattc 227  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |    || | || |||||||||| | |||||||||||    
T  33279139 catgaaaaggcgcaagcataccttagaaaaa-gggtctcttatcagctgacaagaaatccggca----agctactaaaggaagaattggtacatacattc 33279045  T
Q  228 acgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaa 300  Q
    ||||||||||||| ||| ||||||||||||| || |||| ||| ||||||   || |||||| ||||||||||    
T  33279044 acgattcacacatcagtgttctaattgaagttaactgtgaaaccgactttgatggcagaagttagaaattcaa 33278972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 33293194 - 33293090
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac 229  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||  |||||||||||||| | |||||||||||||    
T  33293194 tgaaaaggtgaaagcatacctcagaaaaaagggtctctcattcgctgataagaaatccagaagactagcagctgaaggaagaattggtacatacattcac 33293095  T
Q  230 gattc 234  Q
    |||||    
T  33293094 gattc 33293090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 339
Target Start/End: Complemental strand, 33384156 - 33384040
Alignment:
Q  223 cattcacgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgca 322  Q
    ||||||| ||||||||||  || |||||||||||||||| |||  ||| |||||| |||| |||||||||||| | |||||||| ||| |||||||||||    
T  33384156 cattcactattcacacatcggtgttctaattgaagtgaactgtcaaaccgactttgtcggcagaagtgagaaaattaaggagttggttgatgatcttgca 33384057  T
Q  323 atgcaagttgctgcttg 339  Q
    |||||||| ||||||||    
T  33384056 atgcaagtggctgcttg 33384040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 33385414 - 33385314
Alignment:
Q  28 cagcctgttcacctatctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacactt 126  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| ||| | | ||||||| ||||||||||||||||||||| |||||    
T  33385414 cagcctgttcacctatctttgaattcttacataagatttctaatcgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcactt 33385315  T
Q  127 g 127  Q
    |    
T  33385314 g 33385314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 24632066 - 24632161
Alignment:
Q  33 tgttcacctatctttgaattcttacataaggtttgtaatttttaaatgtctattctg-tcccctttgaattgcagcaactatatcaccaacacttg 127  Q
    |||||||| |||||||||||| |||||||| ||| ||||| |||||||||| ||||| |||  |||| |||||||||||| |||||||| ||||||    
T  24632066 tgttcaccaatctttgaattcctacataagatttctaattgttaaatgtctgttctgctcctgtttggattgcagcaactttatcaccagcacttg 24632161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 33259670 - 33259583
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg 127  Q
    |||||||||||||||||||||| ||| || || |||||||||| ||| | | ||||||| ||||||||||||||||||||| ||||||    
T  33259670 tatctttgaattcttacataagatttatagttgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg 33259583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 33280482 - 33280358
Alignment:
Q  173 gctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacattagtattctaattgaagtgaaatgtggaacgg 272  Q
    |||||||||||||||||||||  |   ||||||||| |||||  ||| |||||||||||||||| |||| || ||||| ||||||| || ||||  || |    
T  33280482 gctgacaagaaatccggaagattaaaagctgaaggaggaatcagtacctacattcacgattcacgcattggttttctatttgaagttaactgtgatactg 33280383  T
Q  273 actttatcggtagaagtgagaaatt 297  Q
    ||||| | || ||||||||||||||    
T  33280382 acttttttggcagaagtgagaaatt 33280358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 33416248 - 33416152
Alignment:
Q  32 ctgttcacctatctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg 127  Q
    ||||||||||||||||||||| |||  ||||  || ||||| |||||||||| ||| | | ||||||| ||||||||||||||||||||| ||||||    
T  33416248 ctgttcacctatctttgaatttttagttaagacttctaattgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg 33416152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 9165283 - 9165228
Alignment:
Q  28 cagcctgttcacctatctttgaattcttacataaggtttgtaatttttaaatgtct 83  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||    
T  9165283 cagcctgttcacctatctttgaatttttacataagatttctaattgttaaatgtct 9165228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 33293078 - 33293034
Alignment:
Q  293 aaattcaaggagtttgttcatgatcttgcaatgcaagttgctgct 337  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  33293078 aaattcaaggagttggttaatgatcttgcaatgcaagttgctgct 33293034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 28873045 - 28873091
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctg 176  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||    
T  28873045 tgaaaaggcgtaagcatacctcagataaaagggtctctcatctgctg 28873091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 33282282 - 33282241
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtc 82  Q
    |||| ||||||||||||||||| ||| |||||||||||||||    
T  33282282 tatcgttgaattcttacataagatttctaatttttaaatgtc 33282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 33398083 - 33398042
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtc 82  Q
    |||| ||||||||||||||||| ||| |||||||||||||||    
T  33398083 tatcgttgaattcttacataagatttataatttttaaatgtc 33398042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 33408993 - 33408952
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtc 82  Q
    |||| ||||||||||||||||| ||| |||||||||||||||    
T  33408993 tatcgttgaattcttacataagatttataatttttaaatgtc 33408952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 130 - 350
Target Start/End: Original strand, 17447760 - 17447981
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaaggg-tctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattca 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |  |||||||||||||||| ||||||||||||    
T  17447760 tgaaaaggcgcaagcatacctcagaaaaaaggggtctctcatccgctgataagaaatccggaagactggcagctgaaggaagaatcggtacatacattca 17447859  T
Q  229 cgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa 328  Q
    |||| ||| |||  ||  |||||||||| |||| | || ||| |||||| | || ||||| |||| |||||||||||| ||| |||||||||||||||||    
T  17447860 cgatgcacgcatcggtggtctaattgaattgaactttgaaaccgactttgttggcagaagggagagattcaaggagttggttgatgatcttgcaatgcaa 17447959  T
Q  329 gttgctgcttgtccacaggttc 350  Q
    || ||||||| |||||||||||    
T  17447960 gtggctgcttttccacaggttc 17447981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 350
Target Start/End: Complemental strand, 2537 - 2315
Alignment:
Q  130 tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata-cattca 228  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||||| ||||||||||| |||| ||  |  ||||||||||||| |||||| || ||     
T  2537 tgaaaagccgcaagcatatctcatcaaaaagggtctctcatccgctgataagaaatccgggagactagcagaagaaggaagaatcggtacatatcactcg 2438  T
Q  229 cgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa 328  Q
    ||||||||||||| || ||||||||||||||||  ||| ||| |||||| | || |||||||||||||| |||||||| ||| | |||||||||||||||    
T  2437 cgattcacacattggtgttctaattgaagtgaacggtgaaaccgactttgttggcagaagtgagaaatttaaggagttggttgacgatcttgcaatgcaa 2338  T
Q  329 gttgctgctt-gtccacaggttc 350  Q
    || |||  || ||||||||||||    
T  2337 gtagctttttggtccacaggttc 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 300
Target Start/End: Original strand, 15114 - 15281
Alignment:
Q  128 catgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattc 227  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |    || | || |||||||||| | |||||||||||    
T  15114 catgaaaaggcgcaagcataccttagaaaaa-gggtctcttatcagctgacaagaaatccggca----agctactaaaggaagaattggtacatacattc 15208  T
Q  228 acgattcacacattagtattctaattgaagtgaaatgtggaacggactttatcggtagaagtgagaaattcaa 300  Q
    ||||||||||||| ||| ||||||||||||| || |||| ||| ||||||   || |||||| ||||||||||    
T  15209 acgattcacacatcagtgttctaattgaagttaactgtgaaaccgactttgatggcagaagttagaaattcaa 15281  T

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Target: scaffold0428; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 3791 - 3704
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg 127  Q
    |||||||||||||||||||||| ||| || || |||||||||| ||| | | ||||||| ||||||||||||||||||||| ||||||    
T  3791 tatctttgaattcttacataagatttatagttgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 13771 - 13895
Alignment:
Q  173 gctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacattagtattctaattgaagtgaaatgtggaacgg 272  Q
    |||||||||||||||||||||  |   ||||||||| |||||  ||| |||||||||||||||| |||| || ||||| ||||||| || ||||  || |    
T  13771 gctgacaagaaatccggaagattaaaagctgaaggaggaatcagtacctacattcacgattcacgcattggttttctatttgaagttaactgtgatactg 13870  T
Q  273 actttatcggtagaagtgagaaatt 297  Q
    ||||| | || ||||||||||||||    
T  13871 acttttttggcagaagtgagaaatt 13895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 11970 - 12011
Alignment:
Q  41 tatctttgaattcttacataaggtttgtaatttttaaatgtc 82  Q
    |||| ||||||||||||||||| ||| |||||||||||||||    
T  11970 tatcgttgaattcttacataagatttctaatttttaaatgtc 12011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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