View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10834_low_1 (Length: 534)

Name: NF10834_low_1
Description: NF10834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10834_low_1
NF10834_low_1
[»] chr7 (50 HSPs)
chr7 (16-241)||(21681249-21681476)
chr7 (13-238)||(21627746-21627972)
chr7 (309-508)||(21714108-21714307)
chr7 (13-123)||(21740671-21740781)
chr7 (98-237)||(21991458-21991596)
chr7 (307-516)||(21788152-21788361)
chr7 (306-494)||(21651991-21652179)
chr7 (22-142)||(21704307-21704426)
chr7 (306-517)||(21628047-21628258)
chr7 (361-516)||(21646720-21646875)
chr7 (13-241)||(21689035-21689256)
chr7 (306-516)||(21704565-21704775)
chr7 (84-240)||(21622745-21622893)
chr7 (13-241)||(21791645-21791866)
chr7 (13-237)||(21713825-21714048)
chr7 (306-516)||(21785325-21785538)
chr7 (306-399)||(21763987-21764077)
chr7 (165-231)||(21791512-21791578)
chr7 (306-399)||(21771883-21771976)
chr7 (356-516)||(21681622-21681782)
chr7 (306-516)||(21808181-21808394)
chr7 (306-399)||(21725818-21725911)
chr7 (165-241)||(21639468-21639544)
chr7 (165-241)||(21663875-21663951)
chr7 (165-240)||(21651859-21651934)
chr7 (384-503)||(21745532-21745651)
chr7 (165-231)||(21788002-21788068)
chr7 (165-241)||(21704425-21704499)
chr7 (15-87)||(21651734-21651806)
chr7 (306-516)||(21664017-21664230)
chr7 (13-82)||(21784566-21784635)
chr7 (356-516)||(15713595-15713755)
chr7 (13-73)||(21663698-21663758)
chr7 (306-483)||(21992092-21992272)
chr7 (448-516)||(21623257-21623325)
chr7 (13-81)||(21725571-21725639)
chr7 (306-365)||(21741028-21741087)
chr7 (23-78)||(21784691-21784746)
chr7 (23-81)||(21771645-21771703)
chr7 (14-69)||(21991408-21991463)
chr7 (165-202)||(21771759-21771796)
chr7 (165-202)||(21785163-21785200)
chr7 (14-65)||(21622693-21622744)
chr7 (38-76)||(21787911-21787949)
chr7 (165-202)||(21725694-21725731)
chr7 (13-99)||(21639321-21639404)
chr7 (448-516)||(21764126-21764194)
chr7 (13-47)||(21791419-21791453)
chr7 (363-516)||(21791990-21792143)
chr7 (166-202)||(21740895-21740931)
[»] scaffold0182 (4 HSPs)
scaffold0182 (306-516)||(25232-25442)
scaffold0182 (13-81)||(34209-34277)
scaffold0182 (306-364)||(34456-34514)
scaffold0182 (165-202)||(34332-34369)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 21681249 - 21681476
Alignment:
Q  16 agcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaa 115  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||| |||    
T  21681249 agcaaagatccaatttccatgaattttacttttcttgtccattgagtaaagtgatagacattatatagtttgttctgaggacaagttgctttagtagcaa 21681348  T
Q  116 agaggacaggtataaaaaatatattaaagtgaagtgtaaca--nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaa 213  Q
    |||||||||||||||||||| |||||||||||||||| | |          |||||||||||||||||||||||||| |||||||||||||||||||| |    
T  21681349 agaggacaggtataaaaaatctattaaagtgaagtgtgagattttttttttaagcaagcatatttacttatcttgtttattaggtaaaggtttgagagca 21681448  T
Q  214 tgaaaatctaaagcactacactgagccc 241  Q
    |||||| |||||||||||| ||||||||    
T  21681449 tgaaaaactaaagcactaccctgagccc 21681476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 21627746 - 21627972
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 112  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |     
T  21627746 aaaagcaacgatcctatttccatgaattttacttttcttgtccgttgagtaaagtgatggacattatatagtttgttctgaggacaagttactttagcag 21627845  T
Q  113 caaagaggacaggtataaaaaatatattaaag-tgaagtgtaaca-nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgaga 210  Q
      |||||||||||||| ||||||  ||||||| |||||||||| |         |||||||||||||||||||||||| |||||||||||||||||||||    
T  21627846 tgaagaggacaggtat-aaaaattgattaaagttgaagtgtaagattttgttttaagcaagcatatttacttatcttgctcattaggtaaaggtttgaga 21627944  T
Q  211 gaatgaaaatctaaagcactacactgag 238  Q
    | ||||||||||||||||||||||||||    
T  21627945 gcatgaaaatctaaagcactacactgag 21627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 309 - 508
Target Start/End: Original strand, 21714108 - 21714307
Alignment:
Q  309 gatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcat 408  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||   || | |    
T  21714108 gatggcatcccaaactattaaagaaaaatttgtggagctacaaaaatcaatgcaaacaccccaaaattcacgaccgaagatacaaagggtggttgaccgt 21714207  T
Q  409 ctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagt 508  Q
     ||| |||| |||||| |||||||  |||||||   || ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  21714208 ttcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaagaaaggagagaagt 21714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 21740671 - 21740781
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  21740671 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtgatggacattatatagtttgttatgaggacaagttactttagtaa 21740770  T
Q  113 caaagaggaca 123  Q
    |||||||||||    
T  21740771 caaagaggaca 21740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 21991458 - 21991596
Alignment:
Q  98 aagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattagg 197  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  21991458 aagttactttagtagtaaagaggacaagtataaaaaatctattaaagtgaagtgtaacattttttt-aagcaagcatatttacttatcttgttcattagg 21991556  T
Q  198 taaaggtttgagagaatgaaaatctaaagcactacactga 237  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21991557 taaaggttcgagagaatgaaaatctaaagcactacactga 21991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 307 - 516
Target Start/End: Original strand, 21788152 - 21788361
Alignment:
Q  307 atgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatc 406  Q
    ||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||      
T  21788152 atgatggcatcccaaactattaatgaaaaatttgtggagttacaaaaatcaaagcaaacaccccaaaattcacgaccgaaaatacaaagggtggcagagt 21788251  T
Q  407 atctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaa 506  Q
    |||||| |||| ||| ||  ||||||  |||||||   || |||||| ||||  | ||||||||||||||||||||  ||||| ||||| ||||||||||    
T  21788252 atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa 21788351  T
Q  507 gttcaagctt 516  Q
    || |||||||    
T  21788352 gtacaagctt 21788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 306 - 494
Target Start/End: Original strand, 21651991 - 21652179
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 405  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |     
T  21651991 aatgatggcatcccaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaacaccccaaaattcacgaccaaagatacaaagggtgccacag 21652090  T
Q  406 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaa 494  Q
     |||||| |||| |||  | |||||||   |||||||  || ||||| || ||| | ||||||||||||||||||||| ||||| ||||    
T  21652091 tatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaatatgaa 21652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 21704307 - 21704426
Alignment:
Q  22 gatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaaagagga 121  Q
    |||||| |||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  21704307 gatcctgtttccgagaattttacttttcttgtacattgagtaaagtgatggacattatata-tttgttctgaggacaagttactttagtaacaaagagga 21704405  T
Q  122 caggtataaaaaatatattaa 142  Q
    |||||||||||||||||||||    
T  21704406 caggtataaaaaatatattaa 21704426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 517
Target Start/End: Original strand, 21628047 - 21628258
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 405  Q
    ||||||||||||||||||||||||||||||||||||| || || || | |||||||||||||||| |||| |||||||||||||||| |||||| | |||    
T  21628047 aatgatggcatcccaaactattaaagaaaaatttgtggagttaaaaaattcaaagcaaacaccccgaaatgcacgaccaaagatacaaagggtggccgat 21628146  T
Q  406 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagaga 505  Q
    ||||||| ||||  || |  ||||| |  | |||||   || ||||| |||||| | |||||||||||||||| || | |||||||||| ||||||||||    
T  21628147 catctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaacataggagaga 21628246  T
Q  506 agttcaagcttg 517  Q
    ||| ||||||||    
T  21628247 agtacaagcttg 21628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 361 - 516
Target Start/End: Original strand, 21646720 - 21646875
Alignment:
Q  361 caaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcat 460  Q
    |||||||||||||||||||||||||||||||| |||||| || |  |||||| |||| ||||||  ||||||| ||||||||  || ||||||||||||     
T  21646720 caaacaccccaaaattcacgaccaaagatacaaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaa 21646819  T
Q  461 ttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  21646820 taggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagctt 21646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 21689035 - 21689256
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 112  Q
    ||||||||  |||| ||||||||||||||||||||||||  ||||||||| ||||  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21689035 aaaagcaaatatcccttttccatgaattttacttttcttccccattgagttaagtggtggacgtg---tagttcgttccgagaacaagttactttagcag 21689131  T
Q  113 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 211  Q
      |||||||||||||||||||  || |||||||| |||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  21689132 tgaagaggacaggtataaaaatcat-ttaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 21689226  T
Q  212 aatgaaaatctaaagcactacactgagccc 241  Q
     |||||||||||||||||||||||||||||    
T  21689227 catgaaaatctaaagcactacactgagccc 21689256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 516
Target Start/End: Original strand, 21704565 - 21704775
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 405  Q
    ||||||||||||||||||||||||||||||||||||  || || || | |||||||||||||| | |||| |||||||||||||||| ||||||  |||     
T  21704565 aatgatggcatcccaaactattaaagaaaaatttgtcgagttaaaaaattcaaagcaaacacctccaaatgcacgaccaaagatacaaagggtgcaagag 21704664  T
Q  406 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagaga 505  Q
     |||||| || | ||| ||  ||||||  |||||||   || ||||| |||||  | ||||||||||||||||||||||||| ||||||| |||||||||    
T  21704665 tatctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaagttaggagaga 21704764  T
Q  506 agttcaagctt 516  Q
    ||| |||||||    
T  21704765 agtacaagctt 21704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 21622745 - 21622893
Alignment:
Q  84 tttgctctgaggacaagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttactta 183  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |        |||         |||||||    
T  21622745 tttgttctgaggacaagttactttagtaaaaaagaggacaggtataaaaaatctattaaagtgaagtgtgagatttttttaaagg--------ttactta 21622836  T
Q  184 tcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagcc 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21622837 tcttgttcattaggtaaaggtttgagagcatgaaaatctaaagcactacactgagcc 21622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 21791645 - 21791866
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 112  Q
    ||||||||  |||| |||||||||||||||||||||||| |||||||||| || |  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21791645 aaaagcaaatatcccttttccatgaattttacttttcttctccattgagttaactggtggacgtg---tagttcgttccgagaacaagttactttagcag 21791741  T
Q  113 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 211  Q
      |||||||||||||||||||  | ||||||||| |||||||| |        |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  21791742 tgaagaggacaggtataaaaatca-attaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcagtaggtaaaggtttgaaag 21791836  T
Q  212 aatgaaaatctaaagcactacactgagccc 241  Q
     |||||||||||||||||||||||||||||    
T  21791837 catgaaaatctaaagcactacactgagccc 21791866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 21713825 - 21714048
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 112  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||   |||||   |||||||| | || |||||||||||||||||| |     
T  21713825 aaaagcaaagatcttttttccatgaattttacttttcttgtccattgagtaaagcggtggac---atatagttcgttccgaggacaagttactttagcag 21713921  T
Q  113 caaagaggacaggtataaaaaatatattaaagt-gaagtgta--acannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgag 209  Q
      ||||||||| |||| |||||| ||||||||| ||| | ||  | |        ||| ||||| ||||||||| |||||||||||||||||||||||||    
T  21713922 tgaagaggacaagtat-aaaaatttattaaagtcgaaatttaagatagtttttttaagaaagcagatttacttaacttgttcattaggtaaaggtttgag 21714020  T
Q  210 agaatgaaaatctaaagcactacactga 237  Q
    || |||||||| ||||||||||||||||    
T  21714021 agcatgaaaatttaaagcactacactga 21714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 306 - 516
Target Start/End: Original strand, 21785325 - 21785538
Alignment:
Q  306 aatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 402  Q
    ||||||| ||||||||||||   || || ||||| ||||| ||||| || | |||||||||| ||||||||||||||||||||||||||| ||||||  |    
T  21785325 aatgatgacatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaccaaagatacaaagggtgcaa 21785424  T
Q  403 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggag 502  Q
    ||  |||| | |||| | | ||  ||||||  |||||||   || ||||| |||||| | |||||||||||||||||||||||||||||||||| |||||    
T  21785425 gagtatctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctgaagacaggag 21785524  T
Q  503 agaagttcaagctt 516  Q
    |||||| |||||||    
T  21785525 agaagtacaagctt 21785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 21763987 - 21764077
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 399  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||| |||||||| ||||||    
T  21763987 aatgatggcatcccaaactcttaaagaaaaatttgtggagctacaa---tcaaagcaaacaccccaaaattcacgacccaagatacaaagggtg 21764077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 21791512 - 21791578
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcacta 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21791512 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagcatgaaaatctaaagcacta 21791578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 21771883 - 21771976
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 399  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| |||| |||||||| ||||||    
T  21771883 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaataccccaaaattcaagaccgaagatacaaagggtg 21771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 356 - 516
Target Start/End: Original strand, 21681622 - 21681782
Alignment:
Q  356 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 455  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||    || |||||||| ||||||  ||| ||| ||||||||  || ||||| ||    
T  21681622 caaatcaaacaccccaaaattcacgaccaaagatacaaagggtgccacggtatgtcaaaaatagaacaaaatttaaggagcattacagccccaagtttgt 21681721  T
Q  456 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
    |||| | |||||||||||||||| |||| || |||| ||| |||||||||||| |||||||    
T  21681722 gtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagctt 21681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 516
Target Start/End: Complemental strand, 21808394 - 21808181
Alignment:
Q  306 aatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 402  Q
    |||||||| |||||||||||   || || ||||  ||||| ||||| || | ||||| |||| ||||||||||||||||||||||||||| |||||| |     
T  21808394 aatgatggaatcccaaactacccttgaaaaaaagattgtggagctaaaaaattcaaatcaaataccccaaaattcacgaccaaagatacaaagggtggct 21808295  T
Q  403 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggag 502  Q
    ||  |||||| |||| |||||| | |||||  |||||||   || |||||||| ||| | ||||||||||||||||  |||  |||||||||| ||||||    
T  21808294 gagtatctcagaaatagaacaaatcttgagaagcattactcacccaagttggtatcaataggtcctatccatcatggaaatataaatctgaagttaggag 21808195  T
Q  503 agaagttcaagctt 516  Q
    |||||| |||||||    
T  21808194 agaagtacaagctt 21808181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 21725818 - 21725911
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 399  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| | ||||||||||| |||| |||||||| ||||||    
T  21725818 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaatatcccaaaattcaagaccgaagatacaaagggtg 21725911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 21639468 - 21639544
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 241  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||||||||||||||||    
T  21639468 aagcaagcatatttacttatcttgttcattaggtaaagtttcaagagcatgaaaatttaaagcactacactgagccc 21639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 21663875 - 21663951
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| |||| |||||||    
T  21663875 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaaaaaaaatccaaagcagtacagtgagccc 21663951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 21651859 - 21651934
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagcc 240  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  21651859 aagcaagcatatttacttatcttgttaattaggtaaaggtttgtgagcatggaaatctagagcactacactgagcc 21651934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 503
Target Start/End: Original strand, 21745532 - 21745651
Alignment:
Q  384 aaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 483  Q
    ||||||||| ||||||  ||| ||||||| |||| |||||| |||||||  |||||||   || |||||||||||||| |||||||||||||||||||||    
T  21745532 aaagatacaaagggtggtagaccatctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaat 21745631  T
Q  484 ccaaatctgaagataggaga 503  Q
    |||||||| |||| ||||||    
T  21745632 ccaaatctaaagacaggaga 21745651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 21788002 - 21788068
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcacta 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  21788002 aagcaagcatatttagttatcttgttcattaggtaaaggtttgagagcatgaaaaactaaagcacta 21788068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 21704425 - 21704499
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  21704425 aagcaagcatatttagttatcttgttcattaggtaaaggttt--gagaatgaaaaactaaagcactacgctgagccc 21704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 21651734 - 21651806
Alignment:
Q  15 aagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttg 87  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  21651734 aagcaaagatcctttttccatgaattttacatttcttgtccattgagtaaagtggtagacattatatagtttg 21651806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 516
Target Start/End: Original strand, 21664017 - 21664230
Alignment:
Q  306 aatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 402  Q
    ||||||||||||||||||||   || || ||||| ||||| ||||| || | |||||||||| |||||||| |||||||||||||||||| |||||| ||    
T  21664017 aatgatggcatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaagttcacgaccaaagatacaaagggtgcca 21664116  T
Q  403 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggag 502  Q
     |  |||||| |||  ||| ||  ||||||  | |||||   || |||||  ||||| | |||||||||||||||| |||| || |||||||| ||||||    
T  21664117 cacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagatctgaagttaggag 21664216  T
Q  503 agaagttcaagctt 516  Q
     ||||| |||||||    
T  21664217 ggaagtacaagctt 21664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 21784566 - 21784635
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatata 82  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21784566 aaaagcaaatatcctttttccgtgaattttacttttcttgtccaatgagtaaagtgatggacattatata 21784635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 356 - 516
Target Start/End: Original strand, 15713595 - 15713755
Alignment:
Q  356 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 455  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||   |||||| |||  | | || || |||| ||||||||   || ||||||||    
T  15713595 caaagcaaacaccccaaagttcacgaccaaagatacaaagggtgccaggctatctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggt 15713694  T
Q  456 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
     ||| | || |||||||||||||||||| ||||||| |||  ||| ||||||| |||||||    
T  15713695 ttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagctt 15713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 21663698 - 21663758
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatgga 73  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  21663698 aaaagcaatgatcctatttccatgaattttacttttcttgtccattgagcaaagtgatgga 21663758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 483
Target Start/End: Original strand, 21992092 - 21992272
Alignment:
Q  306 aatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 402  Q
    |||||||||||||||||||    || |||||||| ||||| ||||| || | |||||||||| |||||||||||||||| || ||||||| |||||| ||    
T  21992092 aatgatggcatcccaaacttcccttgaagaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaacacagatacaaagggtggca 21992191  T
Q  403 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 483  Q
    ||  ||||||||||| ||| |   ||||||  ||| |||   || || ||||||||| | |||||||||||||||| ||||    
T  21992192 gagtatctcaaaaatagaaaagactttgagaagcactactcacccaaattggtgtcaataggtcctatccatcatggcaat 21992272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 516
Target Start/End: Original strand, 21623257 - 21623325
Alignment:
Q  448 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  21623257 aagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagctt 21623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 21725571 - 21725639
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 81  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21725571 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21725639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 365
Target Start/End: Original strand, 21741028 - 21741087
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaac 365  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||    
T  21741028 aatgatggcatcccaaactattaaagaaaaaattgtggagctacaaaaattaaagcaaac 21741087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 21784691 - 21784746
Alignment:
Q  23 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacatta 78  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  21784691 atcctttttccgtgaattttacttttcttgtccattgagtaaagtgatgaacatta 21784746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 21771645 - 21771703
Alignment:
Q  23 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 81  Q
    ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21771645 atcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 21991408 - 21991463
Alignment:
Q  14 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtta 69  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  21991408 aaagcaaatatcctttttccatgaatttcacttttcttgtctattgagtaaagtta 21991463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 21771759 - 21771796
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaag 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21771759 aagcaagcatatttacttatcttgttcattaggtaaag 21771796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 21785163 - 21785200
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaag 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21785163 aagcaagcatatttacttatcttgttcattaggtaaag 21785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21622693 - 21622744
Alignment:
Q  14 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaa 65  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  21622693 aaagcaaagatactatttccatgaattttacttttcttgtccatcgagtaaa 21622744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 21787911 - 21787949
Alignment:
Q  38 attttacttttcttgtccattgagtaaagttatggacat 76  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21787911 attttacttttcttgtccattgagtaaagtgatggacat 21787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 21725694 - 21725731
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaag 202  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21725694 aagcacgcatatttacttatcttgttcattaggtaaag 21725731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 21639321 - 21639404
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaa 99  Q
    |||||||| |||||||||| ||| |||||||||| | |||| |||||||||||||  |||||   |||||||||| | |||||||||    
T  21639321 aaaagcaaagatccttttttcattaattttacttattttgtacattgagtaaagtggtggac---atatagtttgttatgaggacaa 21639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 516
Target Start/End: Original strand, 21764126 - 21764194
Alignment:
Q  448 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
    |||||| ||||| | |||||||||||||||||||   || |||||||| |||||||||||| |||||||    
T  21764126 aagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagctt 21764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 21791419 - 21791453
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttt 47  Q
    |||||||| ||||||||||||||||||||||||||    
T  21791419 aaaagcaaagatcctttttccatgaattttacttt 21791453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 516
Target Start/End: Original strand, 21791990 - 21792143
Alignment:
Q  363 aacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcattt 462  Q
    |||||||| || ||||  |||||||||||| |||||| ||||  |||||| |||  ||  || |||||||  ||||||||| || | ||| || ||| |     
T  21791990 aacacccccaagttcaaaaccaaagatacaaagggtggcagagtatctcagaaagagagaaaattttgagaagcattacatcccaaggtttgtatcaata 21792089  T
Q  463 ggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 516  Q
    ||||| |||||||||| || | || ||||| || |||||||||||| |||||||    
T  21792090 ggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagctt 21792143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 21740895 - 21740931
Alignment:
Q  166 agcaagcatatttacttatcttgttcattaggtaaag 202  Q
    |||||||||||||||||||||| |||| |||||||||    
T  21740895 agcaagcatatttacttatcttcttcaataggtaaag 21740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 306 - 516
Target Start/End: Original strand, 25232 - 25442
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 405  Q
    |||||||||| |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||| || ||    
T  25232 aatgatggcagcccaaactcttaaagaaaaaattgaggagctacaaaaatcaaagcaaacaccccaaaattcaccacccaagatacaaagggtggcatat 25331  T
Q  406 catctcaaaaatcgaacaagttttgagg-tgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagag 504  Q
     | | || |||   | |||  |||||||  | | ||||  || |||||||||||| | |||||||||||||||||||||  |||||||||| ||||||||    
T  25332 taccgcagaaagataccaa-atttgaggaagtactacaaacccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaagttaggagag 25430  T
Q  505 aagttcaagctt 516  Q
    |||| |||||||    
T  25431 aagtacaagctt 25442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 34209 - 34277
Alignment:
Q  13 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 81  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  34209 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 34277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 34456 - 34514
Alignment:
Q  306 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaa 364  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||    
T  34456 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaa 34514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 34332 - 34369
Alignment:
Q  165 aagcaagcatatttacttatcttgttcattaggtaaag 202  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34332 aagcacgcatatttacttatcttgttcattaggtaaag 34369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University