View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10835_high_11 (Length: 239)
Name: NF10835_high_11
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10835_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37109526 - 37109748
Alignment:
| Q |
1 |
ttttccaccaacgaccggttaaaaacatattcttcatttggattgatcccaaaaaagtaacatggatgcaatgaagaagtgaaataaagtgtgccatttt |
100 |
Q |
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| T |
37109526 |
ttttccaccaatgaccggttaaaaacatattcttcatttgggttgatcccaaaaaagtaacatggatgcaatgaagaagtgaaataaagtgtgccatttt |
37109625 |
T |
|
| Q |
101 |
atcgatannnnnnnnaacatcagattttagtactaaagtctaatatgcttactctttcaagtgacctttctttgttccttggcaattgaagaatagatgg |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37109626 |
atcgatattttttttaacatcagattttagtactaaagtctaatatgcttactctttcaagtgacctttctttgttccttggcaattgaagaatagatgg |
37109725 |
T |
|
| Q |
201 |
tttaattgtttgtacctaactaa |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
37109726 |
tttaattgtttgtacctaactaa |
37109748 |
T |
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