View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10835_high_12 (Length: 238)
Name: NF10835_high_12
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10835_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 20155420 - 20155198
Alignment:
| Q |
1 |
tagttatctatgtaagtgtcgacttgaataaaaaaccacctaatgagcagtgcagcgtgatcaagatgtacaaagacccagccaaccatccacacttgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
20155420 |
tagttatctatgtaagtgtcgacttgaataaaaaaccacctaatgagcagtgcagcgtgatcaagatgtacaaagacccaaccaaccatccacacttgag |
20155321 |
T |
|
| Q |
101 |
actgtccatggtggatgtttcgaaatttatgtccaagtgatcttttcagggactcaagttaaactgcttatatggtatattagggttataccctgttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20155320 |
actgtccatggtggatgtttcgaaatttatgtccaagtgatcttttctggtactcaagttaaactgcttatatggtatattagggttataccctgttcat |
20155221 |
T |
|
| Q |
201 |
tacttacttcatttagttgttca |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
20155220 |
tacttacttcatttagttgttca |
20155198 |
T |
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