View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10835_low_12 (Length: 288)
Name: NF10835_low_12
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10835_low_12 |
 | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0014 (3 HSPs) |
| | |
|
| [»] scaffold1840 (1 HSPs) |
| | |
|
| [»] scaffold0572 (1 HSPs) |
| | |
|
| [»] scaffold0110 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 14 - 270
Target Start/End: Complemental strand, 24219890 - 24219634
Alignment:
| Q |
14 |
caaaggctgccttagaaatgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataa |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24219890 |
caaaagctgccttagaaatgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataa |
24219791 |
T |
|
| Q |
114 |
acttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcatt |
213 |
Q |
| |
|
||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24219790 |
acttgttaacgatgcttttgatttctattctgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcatt |
24219691 |
T |
|
| Q |
214 |
atgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24219690 |
atgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
24219634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 16350448 - 16350564
Alignment:
| Q |
68 |
atgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttg |
167 |
Q |
| |
|
||||||| ||||| | ||| || ||||||||| |||| ||||||||||| || | | |||| | || |||||||| |||||| ||| ||||||||| |
|
|
| T |
16350448 |
atgtggtaatgtatagcacaatcattgatggtttgtgtaaagataaactagtaactgatgcctatggtttatattcagaaatgattgtaaagagaattcc |
16350547 |
T |
|
| Q |
168 |
tcctactgttgtcactt |
184 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
16350548 |
tcccactgttgtcactt |
16350564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 269
Target Start/End: Original strand, 10129486 - 10129736
Alignment:
| Q |
19 |
gctgccttagaaatgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttg |
118 |
Q |
| |
|
|||||| | ||| ||||||||||| ||||||||||| | |||| | | ||||||| ||||| | || ||| ||||||||| |||||||||||||||||| |
|
|
| T |
10129486 |
gctgccctggaattgctgagacgagttgatgggaaaattgttcagcctaatgtggtaatgtataccatgatcattgatggtatgtgcaaagataaacttg |
10129585 |
T |
|
| Q |
119 |
ttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatggg |
218 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||| | ||||||||||||| |||| ||||||||||||||||| ||||||| |||| || ||| || |||| |
|
|
| T |
10129586 |
ttaatgatgcttttaatttatattctgaaatgatcgctaagagaatttttcctgatgttgtcacttataataatttaattagtggcttttgcgttgtggg |
10129685 |
T |
|
| Q |
219 |
tcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacat |
269 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10129686 |
tcaattgaaagatgcaattggtttgttgcataaaatgatattggaaaacat |
10129736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 269
Target Start/End: Complemental strand, 4260920 - 4260717
Alignment:
| Q |
66 |
tgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatt |
165 |
Q |
| |
|
||||||||| ||||||| ||| ||||||| | |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4260920 |
tgatgtggtaatgtacactacggttattgacaatatgtgcaaagatacatttgttaatgatgcttttgatttatattatgaaatggttgctagcggaatt |
4260821 |
T |
|
| Q |
166 |
tgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaa |
265 |
Q |
| |
|
| ||||| |||||||||||||| | |||||||| |||||| ||| || | ||| ||||| |||| || | |||||||| | |||||||||| ||||| |
|
|
| T |
4260820 |
tctcctaatgttgtcacttatactgctttaattgatggtttttgcgttgttggtaaattggaagaagcgttgggtttgtttaaaaaaatgatatcggaaa |
4260721 |
T |
|
| Q |
266 |
acat |
269 |
Q |
| |
|
|||| |
|
|
| T |
4260720 |
acat |
4260717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 269
Target Start/End: Complemental strand, 4264542 - 4264339
Alignment:
| Q |
66 |
tgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatt |
165 |
Q |
| |
|
||||||||| ||||||| ||| ||||||| | |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4264542 |
tgatgtggtaatgtacactacggttattgacaatatgtgcaaagatacatttgttaatgatgcttttgatttatattatgaaatggttgctagcggaatt |
4264443 |
T |
|
| Q |
166 |
tgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaa |
265 |
Q |
| |
|
| ||||| |||||||||||||| | |||||||| |||||| ||| || | ||| ||||| |||| || | |||||||| | |||||||||| ||||| |
|
|
| T |
4264442 |
tctcctaatgttgtcacttatactgctttaattgatggtttttgcgttgttggtaaattggaagaagcgttgggtttgtttaaaaaaatgatatcggaaa |
4264343 |
T |
|
| Q |
266 |
acat |
269 |
Q |
| |
|
|||| |
|
|
| T |
4264342 |
acat |
4264339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 41315666 - 41315844
Alignment:
| Q |
67 |
gatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaattt |
166 |
Q |
| |
|
||||| || ||||| ||||| || ||||||||| |||| |||||||| ||||| ||| |||||| ||| ||||||| ||||||| |||| ||| ||||| |
|
|
| T |
41315666 |
gatgtagtaatgtataacacaataattgatggtttgtgtaaagataagcttgtaaatgatgcttatgagttatattctgaaatgattgcagagaaaattt |
41315765 |
T |
|
| Q |
167 |
gtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgtt |
245 |
Q |
| |
|
|||| ||||| ||||| ||| || |||| | ||| || |||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
41315766 |
ctcctgatgttgccactttcaattctctaatatatggattttgcattattggtcaattgaaagatgcatttggtttgtt |
41315844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 17250710 - 17250828
Alignment:
| Q |
67 |
gatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaattt |
166 |
Q |
| |
|
||||| || ||||| || || |||||||||||| | || |||||||||||||| | |||| ||||||||||||| ||||||| ||| ||||| ||| |
|
|
| T |
17250710 |
gatgttgtaatgtataatactattattgatggtttatgtaaagataaacttgtgagggatgcgtttgatttatattgtgaaatgtttgagaagagggttt |
17250809 |
T |
|
| Q |
167 |
gtcctactgttgtcactta |
185 |
Q |
| |
|
||||| |||||| ||||| |
|
|
| T |
17250810 |
ttcctaatgttgttactta |
17250828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 19489686 - 19489730
Alignment:
| Q |
106 |
aaagataaacttgttaattatgcttttgatttatattatgaaatg |
150 |
Q |
| |
|
|||||||||| ||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
19489686 |
aaagataaacatgtaaatgatgcttttgatttatattctgaaatg |
19489730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 41)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 24730217 - 24730455
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||||| |||| ||||||||||||| |||| | | ||| ||| |||||||||| |||||||||| | ||||||||| ||| ||||||||| ||||||| |
|
|
| T |
24730217 |
tgctgaaacgagttgatgggaaattagttcagcctaatgcggtaatgtacaacatgattattgataatatgtgcaaagctaagcttgttaatgatgcttt |
24730316 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| |||| || | |||||| ||||| |||||||| ||| || ||||||||||||||||||||||| |
|
|
| T |
24730317 |
tgatttatattctcaaatggttgctaagagaatttctcctgatgatttcacttgtaatagtttaatttatggcttctgcattatgggtcaattgaaagag |
24730416 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||| ||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
24730417 |
gcagttggtttgttacacaaaatgatattagaaaacatc |
24730455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 29881809 - 29882035
Alignment:
| Q |
44 |
ttgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatatta |
143 |
Q |
| |
|
||||||| |||||||||| ||||||| ||| ||||||| ||||||||||| | |||| |||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
29881809 |
ttgatggaaaattggttcagcttgatgcggtaatgtacagttcgattattgatagcatgtgtaaagataaacatgttaatgatgcttttgatttatattc |
29881908 |
T |
|
| Q |
144 |
tgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttg |
243 |
Q |
| |
|
|||||||| ||| |||||||||| ||||| |||||||||||||| | |||||||| |||| || |||||| | ||| |||||||||||||||||| |||| |
|
|
| T |
29881909 |
tgaaatggctgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgcattgttggtaaattgaaagatgcaattgatttg |
29882008 |
T |
|
| Q |
244 |
ttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
29882009 |
tttaataaaatgatattggaaaacatc |
29882035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 29908965 - 29909191
Alignment:
| Q |
44 |
ttgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatatta |
143 |
Q |
| |
|
||||||| |||||||||| ||||||| ||| ||||||| ||||||||||| | |||| |||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
29908965 |
ttgatggaaaattggttcagcttgatgcggtaatgtacagttcgattattgatagcatgtgtaaagataaacatgttaatgatgcttttgatttatattc |
29909064 |
T |
|
| Q |
144 |
tgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttg |
243 |
Q |
| |
|
|||||||| ||| |||||||||| ||||| |||||||||||||| | |||||||| |||| || |||||| | ||| |||||||||||||||||| |||| |
|
|
| T |
29909065 |
tgaaatggctgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgcattgttggtaaattgaaagatgcaattgatttg |
29909164 |
T |
|
| Q |
244 |
ttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
29909165 |
tttaataaaatgatattggaaaacatc |
29909191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 270
Target Start/End: Original strand, 29928641 - 29928873
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
||||| ||||||| ||||| |||| | ||||||||| |||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
29928641 |
gacgatttgatggaaaatttgttcagcctgatgtggtaatgtacaataccattatcgatggtatgtgtaaagataaacatgttaatgatgcttttgattt |
29928740 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||| |||||||||||||| | |||||||| |||| || |||||| | ||| |||||||||||||| || |
|
|
| T |
29928741 |
atattctgaaatggttgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgcattgttggtaaattgaaagatgcattt |
29928840 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| ||| || |||||||||||||| |||||||| |
|
|
| T |
29928841 |
gatttttttaataaaatgatattgtaaaacatc |
29928873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 270
Target Start/End: Complemental strand, 24272584 - 24272346
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| ||||||| |||||| ||| || | | |||| ||||||||||| ||||||||| | |||||||||||||||||| |||| ||||||| |
|
|
| T |
24272584 |
tgctgagacgagttgatggtaaattgcttcaacctaacttggtaatgtacaacaccattattgatagcatgtgcaaagataaacttgataatgatgcttt |
24272485 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| ||| |||| |||||||||| |||||||| |||||| |||||| | ||| ||||||||||| |
|
|
| T |
24272484 |
tgatttatattctgaaatggtttctaagagaattttccctgatgttaacacttataatgctttaattaatggtttttgcattgttggtaaattgaaagat |
24272385 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||||||||| ||||||||| || |||||||||| |
|
|
| T |
24272384 |
gcaattggtttgttcaataaaatgacatcggaaaacatc |
24272346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 38 - 270
Target Start/End: Complemental strand, 24264383 - 24264151
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
||||| ||||||| |||||||||| ||||||||||| ||||||| |||||||||||| || |||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
24264383 |
gacgagttgatggaaaattggttcagcttgatgtggtaatgtacagtacgattattgatagtatgtgtaaagataaaaatgttaatgatgcttttgattt |
24264284 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| |||||||||| ||| |||||||| | | | | |||||||||||| | |||||||| |||| || |||||| | ||| ||||||||||||||||| |
|
|
| T |
24264283 |
atattctgaaatggtttctaggagaatttcttccaatattgtcacttatagtgctttaattagtggcttttgcattgttggtaaattgaaagatgcaatt |
24264184 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||| ||||||||| || |||||||||| |
|
|
| T |
24264183 |
ggtttgttcaataaaatgacatcggaaaacatc |
24264151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 29834577 - 29834815
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||||||||| | |||||||||||||||| | | |||||| |||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||| |
|
|
| T |
29834577 |
tgctgagacgtgtagatgggaaattggttcagcctagtgtggtaatgtacaataccattatcgatggtatgtgtaaagataaacatgttaatgatgcttt |
29834676 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| ||| |||| ||||||| ||| |||| ||| |||| || |||||| | ||| ||||||||||| |
|
|
| T |
29834677 |
tgatttatattctgaaatggtttctaagagaatttcccctgatgttttcacttacaatgctttgattagtggcttttgcattgttggtaaattgaaagat |
29834776 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
29834777 |
gcaattggtttgttcaataaaatgacattggaaaacatc |
29834815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 29866011 - 29866249
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||||||||| | |||||||||||||||| | | |||||| |||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||| |
|
|
| T |
29866011 |
tgctgagacgtgtagatgggaaattggttcagcctagtgtggtaatgtacaataccattatcgatggtatgtgtaaagataaacatgttaatgatgcttt |
29866110 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| ||| |||| ||||||| ||| |||| ||| |||| || |||||| | ||| ||||||||||| |
|
|
| T |
29866111 |
tgatttatattctgaaatggtttctaagagaatttcccctgatgttttcacttacaatgctttgattagtggcttttgcattgttggtaaattgaaagat |
29866210 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
29866211 |
gcaattggtttgttcaataaaatgacattggaaaacatc |
29866249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 256
Target Start/End: Complemental strand, 24887158 - 24886934
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| ||||||| |||||||||| || | ||||| | ||||||| ||| |||||||||||| ||||||||| ||||||||||||| ||||||| |
|
|
| T |
24887158 |
tgctgagacgagttgatggcaaattggttcaacctaatgtgataatgtacagcaccattattgatggtatgtgcaaaggtaaacttgttaatgatgcttt |
24887059 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| ||||||||| || |||||||||| |||| |||| ||||||| | | |||||||| ||||||| |||||| | ||| ||||||| ||| |
|
|
| T |
24887058 |
tgatttatattctgaaatggtcgcgaagagaatttctcctgatgttatcacttacagtgctttaattagtggtttttgcattgttggtaaattgaatgat |
24886959 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatga |
256 |
Q |
| |
|
||||||| ||||| ||||||||| |
|
|
| T |
24886958 |
acaattgggttgttcaataaaatga |
24886934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 29349235 - 29349003
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| ||||||| |||||||||| || | ||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| | ||||| |
|
|
| T |
29349235 |
tgctgagacgagttgatggtaaattggttcaacctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaaacttgttaatgaagcttt |
29349136 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| ||||| | |||| ||| |||||| ||||| | | |||||||| ||||||| |||||| | ||| ||||||| ||| |
|
|
| T |
29349135 |
tgatttatattctgaaatggtttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgcattcttggtaaattgaatgat |
29349036 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaa |
264 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |
|
|
| T |
29349035 |
gcaattggtttgttcaataaaatgatatcggaa |
29349003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 270
Target Start/End: Original strand, 29897450 - 29897682
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
||||| ||||||| |||||||||| ||| ||| ||| |||||||| || ||||||||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
29897450 |
gacgagttgatggtaaattggttcagcttaatgcggtaatgtacaataccgttattgatggtatgtgtaaagataaacatgttaatgatgcttttgattt |
29897549 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||| |||||| ||||| | | |||||||| ||| || |||||| | ||| ||||||||||||||||| |
|
|
| T |
29897550 |
atattctgaaatggttgcaaagagaatttatcccggtgttgttacttacagtgctttaattattggcttttgcattgttggtaaattgaaagatgcaatt |
29897649 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| |
|
|
| T |
29897650 |
ggtttgttcaataaaatgatattgaaaaacatc |
29897682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 270
Target Start/End: Original strand, 29902620 - 29902856
Alignment:
| Q |
34 |
ctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttg |
133 |
Q |
| |
|
|||||||| ||||| |||||||||||| | | ||||||| ||||| || ||||||||||||||| ||||||||| |||| |||||||| ||||||||| |
|
|
| T |
29902620 |
ctgagacgtgttgatcggaaattggttcagcctaatgtggtaatgtataatacgattattgatggtatgtgcaaaggtaaatttgttaatgatgcttttg |
29902719 |
T |
|
| Q |
134 |
atttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgc |
233 |
Q |
| |
|
||||||||| |||||||||| ||| ||||| || ||||| |||||||||||||| | |||||||| |||| || |||||| | ||| || ||| |||||| |
|
|
| T |
29902720 |
atttatattttgaaatggtttctaggagaacttctcctaatgttgtcacttatagtgctttaattagtggattttgcattgttggtaaactgagagatgc |
29902819 |
T |
|
| Q |
234 |
aattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||| ||| || ||||||||||||| ||||||||| |
|
|
| T |
29902820 |
aattgatttctttaataaaatgatattcgaaaacatc |
29902856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 28927619 - 28927392
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||||||||| ||||||| | |||||||||| || |||| |||||||||||||||||| | ||||| |
|
|
| T |
28927619 |
tgctgagacgagttgatgggaaattggttcaacctgatgtggtaatgtacactatgattattgatagtatgtgtaaagataaacttgttaatgaagcttt |
28927520 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| ||||| | |||| ||| ||||| ||||| | | |||||||| ||||||| |||||| | ||| ||||||| ||| |
|
|
| T |
28927519 |
tgatttatattctgaaatggtttctaaggggatttctcccgaagttgttacttacagtgctttaattagtggtttttgcattcttggtaaattgaatgat |
28927420 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatat |
259 |
Q |
| |
|
||||||||||||| ||||||||||||| |
|
|
| T |
28927419 |
tcaattggtttgtttcataaaatgatat |
28927392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 29073125 - 29073363
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| | ||||| |||||||||| || | ||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| | ||||| |
|
|
| T |
29073125 |
tgctgagacgagtcgatggtaaattggttcaacctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaaacttgttaatgaagcttt |
29073224 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| || || |||||| |||| |||||| ||||| | | |||||||| |||| || | |||| | ||| || |||||||| |
|
|
| T |
29073225 |
tgatttatattctgaaatggtttctgagggaatttctcctgatgttgttacttacagtgctttaattagtgggtttttcattgttggtaaactgaaagat |
29073324 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
29073325 |
gcaattgatctgtttaataaaatgatattggaaaacatc |
29073363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 29105698 - 29105936
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| | ||||| |||||||||| || | ||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| | ||||| |
|
|
| T |
29105698 |
tgctgagacgagtcgatggtaaattggttcaacctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaaacttgttaatgaagcttt |
29105797 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| || || |||||| |||| |||||| ||||| | | |||||||| |||| || | |||| | ||| || |||||||| |
|
|
| T |
29105798 |
tgatttatattctgaaatggtttctgagggaatttctcctgatgttgttacttacagtgctttaattagtgggtttttcattgttggtaaactgaaagat |
29105897 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
29105898 |
gcaattgatctgtttaataaaatgatattggaaaacatc |
29105936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 270
Target Start/End: Complemental strand, 29367058 - 29366820
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
||||||||||| ||||||| |||||||||| || | ||||||| ||||||||||| ||||||||| | ||||||||| ||| ||||||||| | ||||| |
|
|
| T |
29367058 |
tgctgagacgagttgatggtaaattggttcaacctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaagcttgttaatgaagcttt |
29366959 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| ||||| | |||| ||| |||||| ||||| ||| |||||||| |||| || |||||| | ||| || |||||||| |
|
|
| T |
29366958 |
tgatttatattctgaaatggtttctaaggggatttctcccgatgttgttacttacaatgctttaattagtggcttttgcattgtcggtaaaatgaaagat |
29366859 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||| || |||||| ||||||||||||| ||||||||| |
|
|
| T |
29366858 |
gcaactgatttgtttaataaaatgatattcgaaaacatc |
29366820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 256
Target Start/End: Original strand, 24711515 - 24711724
Alignment:
| Q |
47 |
atgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatga |
146 |
Q |
| |
|
||||||||||||||| || | ||||||| ||||||| ||| ||||||||| || | |||||| |||||||||||||| |||| ||||||||||||| ||| |
|
|
| T |
24711515 |
atgggaaattggttcaacctaatgtggtaatgtacaccacaattattgatagtttatgcaaatataaacttgttaatgatgcatttgatttatattctga |
24711614 |
T |
|
| Q |
147 |
aatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgtta |
246 |
Q |
| |
|
||||| ||||||||||||||| ||| |||||||||||||| | |||||||| ||||| | |||||| | ||| ||||||| ||||||||| | ||||| |
|
|
| T |
24711615 |
aatggctgctaagagaatttgccctgatgttgtcacttatagtgctttaattagtggtgtttgcattgttggtaaattgaatgatgcaatttggttgttc |
24711714 |
T |
|
| Q |
247 |
cataaaatga |
256 |
Q |
| |
|
||||||||| |
|
|
| T |
24711715 |
aataaaatga |
24711724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 38 - 269
Target Start/End: Original strand, 29905021 - 29905252
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
||||| ||||||| ||| |||||| || ||||||||| | ||||| ||||||||||| || |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
29905021 |
gacgagttgatggaaaactggttcaacctgatgtggtaaagtacattgcgattattgatagtatgtgtaaagataaacatgttaatcatgcttttgattt |
29905120 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| | |||||||| |||||||||||| ||| | || ||||||| ||| |||||||| ||| || |||||| | ||| ||||||||||||||||| |
|
|
| T |
29905121 |
atattctaaaatggtttctaagagaatttcccctgatattctcacttacaatgctttaattagtgacttttgcattgttggtaaattgaaagatgcaatt |
29905220 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacat |
269 |
Q |
| |
|
||||| || ||||||||| |||||||||||| |
|
|
| T |
29905221 |
ggttttttcaataaaatgacattggaaaacat |
29905252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 29893915 - 29894153
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||| |||||| ||||||| || ||||||| | | ||||||| ||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||| |
|
|
| T |
29893915 |
tgctcagacgagttgatggtaatttggttcagcctaatgtggtaatgtacagtaccattatcgatggtatgtgtaaagataaacatgttaatgatgcttt |
29894014 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||| ||| | |||||| ||||| | | |||||||| |||| || | || | | |||||| |||||||| |
|
|
| T |
29894015 |
tgatttatattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttcactgttggtcaactgaaagat |
29894114 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
29894115 |
gcaattgatctgtttaataaaatgatattggaaaacatc |
29894153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 270
Target Start/End: Original strand, 29886665 - 29886897
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
||||| ||||||| |||||||||| | ||||||||| |||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
29886665 |
gacgagttgatggaaaattggttcagcctgatgtggtaatgtacaataccattatcgatggtatgtgtaaagataaacatgttaatgatgcttttgattt |
29886764 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| |||||||| | |||||||||||| || |||| ||||||| ||| |||||||| |||| || |||||| | ||| ||||||||||||||| | |
|
|
| T |
29886765 |
atattctgaaatggcttctaagagaattttccccgatgttttcacttacaatgctttaattagtggcttttgcattgttggtaaattgaaagatgcaact |
29886864 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| ||| || ||||||||| || | |||||||| |
|
|
| T |
29886865 |
gatttattcaataaaatgacatcgaaaaacatc |
29886897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 270
Target Start/End: Original strand, 29098712 - 29098943
Alignment:
| Q |
39 |
acgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattta |
138 |
Q |
| |
|
|||| ||||||| || ||||||| | | ||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| | |||||||||||| |
|
|
| T |
29098712 |
acgagttgatggtaatttggttcagcctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaaacttgttaatgaagcttttgattta |
29098811 |
T |
|
| Q |
139 |
tattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattg |
238 |
Q |
| |
|
| || |||||||||| ||||| | |||| ||| |||||| ||||| | | |||||||| ||||||| |||||| | ||| || ||||||||||||||| |
|
|
| T |
29098812 |
ttttctgaaatggtttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgcattcttggtaaactgaaagatgcaattg |
29098911 |
T |
|
| Q |
239 |
gtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| |||| ||||||||||||||||||||||| |
|
|
| T |
29098912 |
atctgtttaataaaatgatattggaaaacatc |
29098943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 29945997 - 29946207
Alignment:
| Q |
35 |
tgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttga |
134 |
Q |
| |
|
||||||| ||||| | |||||||||| || ||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||| ||| | |||| |
|
|
| T |
29945997 |
tgagacgtgttgatagaaaattggttcaacctgatgtggtaatgtatagtgtgattattgatggtatgtgcaaagataaacttgttaatgatgttgttga |
29946096 |
T |
|
| Q |
135 |
tttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgca |
234 |
Q |
| |
|
|||||||| |||||||||| |||||||||||| ||| | |||| ||||| || ||||||||| ||| || |||||| ||||||||||||| |||||| |
|
|
| T |
29946097 |
tttatattctgaaatggttactaagagaatttctccgaacattgtaacttacaacactttaattcatggcttttgcattgtgggtcaattgaatgatgca |
29946196 |
T |
|
| Q |
235 |
attggtttgtt |
245 |
Q |
| |
|
|||||||||| |
|
|
| T |
29946197 |
tttggtttgtt |
29946207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 270
Target Start/End: Original strand, 29084387 - 29084618
Alignment:
| Q |
39 |
acgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattta |
138 |
Q |
| |
|
|||| ||||||| |||||||||| ||| ||| ||| |||||||| || ||||| ||||| |||| |||||||||| ||||||| |||||||||||||| |
|
|
| T |
29084387 |
acgagttgatggtaaattggttcagcttaatgcggtaatgtacaataccgttatttatggtatgtgtaaagataaacatgttaatgatgcttttgattta |
29084486 |
T |
|
| Q |
139 |
tattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattg |
238 |
Q |
| |
|
|||| |||||||||| ||||| |||||| ||| | |||||| ||||| | | |||||||| |||| || | | || | ||| || ||||||||||||||| |
|
|
| T |
29084487 |
tattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttcgttgttggtaaactgaaagatgcaattg |
29084586 |
T |
|
| Q |
239 |
gtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| |||| ||||||| ||||||||||||||| |
|
|
| T |
29084587 |
atctgtttaataaaataatattggaaaacatc |
29084618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 206
Target Start/End: Complemental strand, 24890883 - 24890709
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||||| |||| ||||||||||||| |||| | | ||| ||| |||||||||| |||||||||| | ||||||||| ||| ||||||||| ||||||| |
|
|
| T |
24890883 |
tgctgaaacgagttgatgggaaattagttcagcctaatgcggtaatgtacaacatgattattgataatatgtgcaaagctaagcttgttaatgatgcttt |
24890784 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggttt |
206 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| ||| |||| ||||||| ||| |||||||| ||||||| |
|
|
| T |
24890783 |
tgatttatattctcaaatggttgctaagagaatttgccctgatgttttcacttacaatgctttaattagtggttt |
24890709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 270
Target Start/End: Complemental strand, 29211715 - 29211477
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||| |||||| ||||||| |||||||||| | | ||||||| ||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||| |
|
|
| T |
29211715 |
tgctcagacgagttgatggtaaattggttcagcctaatgtggtaatgtacagtaccattatcgatggtatgtgtaaagataaacatgttaatgatgcttt |
29211616 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||| ||| | |||||| ||||| | | |||||||| |||| || | || | | ||| || |||||||| |
|
|
| T |
29211615 |
tgatttatattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttcactgttggtaaactgaaagat |
29211516 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||| ||| | |||| |||||||||||| |||||||||| |
|
|
| T |
29211515 |
gcagttgatctgtttaataaaatgatatcggaaaacatc |
29211477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 39 - 270
Target Start/End: Original strand, 29115630 - 29115861
Alignment:
| Q |
39 |
acgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattta |
138 |
Q |
| |
|
|||| ||||||| || ||||||| | | ||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| | |||||||||||| |
|
|
| T |
29115630 |
acgagttgatggtaatttggttcagcctaatgtggtaatgtacaacaccattattgatagcatgtgcaaagttaaacttgttaatgaagcttttgattta |
29115729 |
T |
|
| Q |
139 |
tattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattg |
238 |
Q |
| |
|
| || ||||||| || ||||| | |||| ||| |||||| ||||| | | |||||||| ||||||| |||||| | ||| || |||| |||||||||| |
|
|
| T |
29115730 |
ttttctgaaatgatttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgcattcttggtaaactgaatgatgcaattg |
29115829 |
T |
|
| Q |
239 |
gtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| |||| ||||||||||||||||||||||| |
|
|
| T |
29115830 |
atctgtttaataaaatgatattggaaaacatc |
29115861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 270
Target Start/End: Complemental strand, 21161226 - 21161024
Alignment:
| Q |
68 |
atgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttg |
167 |
Q |
| |
|
||||||| ||||||| || |||||| || || | ||||| ||||||||||| | | |||||||||||||||||| |||||||||||| | |||||| | |
|
|
| T |
21161226 |
atgtggtcatgtacagtacaattatttatagtttatgcaaggataaacttgtaattgatgcttttgatttatattctgaaatggttgccatgagaatatt |
21161127 |
T |
|
| Q |
168 |
tcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaac |
267 |
Q |
| |
|
||||| ||| || || |||||||||||||| | ||| || |||||| |||||||| ||||| | ||||||| ||||||| || ||||| | ||| ||||| |
|
|
| T |
21161126 |
tcctaatgtggttacctataatactttaatatatggcttttgcattgtgggtcaaatgaaacaagcaattgatttgttaaatgaaatgttgttgaaaaac |
21161027 |
T |
|
| Q |
268 |
atc |
270 |
Q |
| |
|
||| |
|
|
| T |
21161026 |
atc |
21161024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 25450282 - 25450508
Alignment:
| Q |
44 |
ttgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatatta |
143 |
Q |
| |
|
||||||| |||||||||| | | |||| || ||||||||| | |||||||| | |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25450282 |
ttgatggtaaattggttcagcctcatgtagtaatgtacaacgtgcttattgatagaatgtgtaaagataaacttgttaacgttgcttttgatttatatta |
25450381 |
T |
|
| Q |
144 |
tgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttg |
243 |
Q |
| |
|
||||||| |||||||||| |||| ||||| |||| ||||||| |||||| || || ||| | ||||| | || |||||||||||||||||| ||||| |
|
|
| T |
25450382 |
tgaaatgcttgctaagaggatttctcctaatgttatcacttacaatactctacttcatggcctttgcatcgttggacaattgaaagatgcaattagtttg |
25450481 |
T |
|
| Q |
244 |
ttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| | | |||| ||| |||||||||| |
|
|
| T |
25450482 |
tttaagataatggtatcggaaaacatc |
25450508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 31000531 - 31000401
Alignment:
| Q |
76 |
atgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactg |
175 |
Q |
| |
|
||||||| ||| ||||||||| || | |||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||||| | | | || |
|
|
| T |
31000531 |
atgtacaccacaattattgatagtttatgcaaatataaacttgtcaacgatgcttttgatttatattctgaaatggttgctaagagaattggccttgatg |
31000432 |
T |
|
| Q |
176 |
ttgtcacttataatactttaatttgtggttt |
206 |
Q |
| |
|
|| ||||||| ||| |||||||| ||||||| |
|
|
| T |
31000431 |
ttttcacttacaatgctttaattagtggttt |
31000401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 269
Target Start/End: Complemental strand, 30578331 - 30578168
Alignment:
| Q |
106 |
aaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtt |
205 |
Q |
| |
|
|||||||||||||| | |||| | ||||||||||| ||| ||||||| |||||||||| |||| ||||||||| ||||||||| |||| | ||||| |
|
|
| T |
30578331 |
aaagataaacttgtagttgatgcgtatgatttatattgtgagatggttgtcaagagaatttttcctgatgttgtcacgtataatactctaatatatggtt |
30578232 |
T |
|
| Q |
206 |
tatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacat |
269 |
Q |
| |
|
| || ||| ||||||||||| ||||||| ||| ||||||| || |||||| |||| ||||||| |
|
|
| T |
30578231 |
tttgtattgtgggtcaattggaagatgctattcgtttgtttaatgaaatgagattgaaaaacat |
30578168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 270
Target Start/End: Original strand, 24941606 - 24941800
Alignment:
| Q |
76 |
atgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactg |
175 |
Q |
| |
|
|||||||| || ||||||||| || ||||||| ||||||||||| | | |||| | |||||||| || ||||||| ||| ||||||||||| ||| || |
|
|
| T |
24941606 |
atgtacaatacaattattgatagtttgtgcaaggataaacttgtaattcatgcctctgatttatgttctgaaatgattgttaagagaatttttccagatg |
24941705 |
T |
|
| Q |
176 |
ttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||||||| |||| |||| | ||| || || ||| |||||||||| ||||| || || |||||||| || ||||| | ||| |||||||| |
|
|
| T |
24941706 |
ttgtcacttatactactctaatatatggcttttgtattgtgggtcaatttaaagaagctgttcgtttgttaaatcaaatgttgttgaaaaacatc |
24941800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 267
Target Start/End: Original strand, 29876221 - 29876422
Alignment:
| Q |
66 |
tgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatt |
165 |
Q |
| |
|
||||||||| ||||| | | |||||||| ||||| |||| |||||||| |||||| || |||| |||||||| ||| ||||||||||||||||||| || |
|
|
| T |
29876221 |
tgatgtggtaatgtataccgcgattattaatggtttgtgtaaagataagcttgttgatgatgcgtttgatttgtatactgaaatggttgctaagagagtt |
29876320 |
T |
|
| Q |
166 |
tgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaa |
265 |
Q |
| |
|
| ||| |||| | ||||||||| | | |||| |||||| || || |||||| ||||||||||| ||||||||||| || | |||| |||||||| |
|
|
| T |
29876321 |
tctccggatgtttttacttataatgcgatgatttatggtttttgtgttgtgggtcggttgaaagatgctattggtttgtttaatgatatgaaattggaaa |
29876420 |
T |
|
| Q |
266 |
ac |
267 |
Q |
| |
|
|| |
|
|
| T |
29876421 |
ac |
29876422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 270
Target Start/End: Complemental strand, 15727770 - 15727567
Alignment:
| Q |
67 |
gatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaattt |
166 |
Q |
| |
|
|||||||| ||| |||| ||||| |||||| || |||| ||| ||||| |||| | | |||| | ||| ||||||| ||||||| || | |||||||||| |
|
|
| T |
15727770 |
gatgtggtaatgcacaatacgatcattgatagtttgtgtaaacataaatttgtaactgatgcctatgagttatattctgaaatgattacaaagagaattt |
15727671 |
T |
|
| Q |
167 |
gtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaa |
266 |
Q |
| |
|
||||| | || |||||| ||| ||||||||| || || |||||| | |||||||||||||| ||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
15727670 |
ctcctaatattatcactttcaattctttaatttacggattttgcattgttggtcaattgaaagaagcatttggtttgttctatcaaatgctattgaaaaa |
15727571 |
T |
|
| Q |
267 |
catc |
270 |
Q |
| |
|
|||| |
|
|
| T |
15727570 |
catc |
15727567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 245
Target Start/End: Original strand, 24934073 - 24934242
Alignment:
| Q |
76 |
atgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactg |
175 |
Q |
| |
|
|||||||| || ||||||||| || ||||||| ||||||||||| | | |||| | |||||||| || ||||||| ||| ||||||||||| ||| || |
|
|
| T |
24934073 |
atgtacaatacaattattgatagtttgtgcaaggataaacttgtaattcatgcctctgatttatgttctgaaatgattgttaagagaatttttccagatg |
24934172 |
T |
|
| Q |
176 |
ttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgtt |
245 |
Q |
| |
|
|||||||||||| |||| |||| | ||| | | ||| |||||| ||||||||| ||| |||||||||| |
|
|
| T |
24934173 |
ttgtcacttatactactctaatatatggctgtttgattgtgggtcgattgaaagaagcagttggtttgtt |
24934242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 255
Target Start/End: Complemental strand, 29950500 - 29950311
Alignment:
| Q |
66 |
tgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatt |
165 |
Q |
| |
|
|||||| || ||||||||||| || ||||| | | | || |||||||| ||||||| | ||| | ||||||||||| ||||||| ||| ||| | |||| |
|
|
| T |
29950500 |
tgatgtcgttatgtacaacacaatcattgacgctctctgtaaagataagcttgttagtgatgggtatgatttatattctgaaatgattgttaacaaaatt |
29950401 |
T |
|
| Q |
166 |
tgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatg |
255 |
Q |
| |
|
||||| ||| ||||||| |||||| |||| | |||||| | |||| |||||||| ||||||| ||| ||||||||||| || ||||| |
|
|
| T |
29950400 |
catcctaatgtcatcacttacaatactctaatatatggtttttccattttgggtcaaatgaaagaagcagttggtttgttaaatcaaatg |
29950311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 30153962 - 30154088
Alignment:
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| ||||| ||||| ||| ||||||| |||| |||||| | ||| || |||||| |||||||||| |||| |
|
|
| T |
30153962 |
tgatttatattctgaaatgattgttaagaaaatttatcctaatgtcgtcactttcaatagtttaatctatggattttgcattgtgggtcaattcgaagaa |
30154061 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgata |
258 |
Q |
| |
|
||| |||||||||| || |||||||| |
|
|
| T |
30154062 |
gcagttggtttgttcaatgaaatgata |
30154088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 245
Target Start/End: Complemental strand, 24739796 - 24739619
Alignment:
| Q |
68 |
atgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttg |
167 |
Q |
| |
|
||||||| ||||||| || |||||| || || | ||||| ||||||||||| | | |||||||||||||||||| | ||||| || |||||||||| |
|
|
| T |
24739796 |
atgtggtcatgtacagtacaattatttatagtttatgcaaggataaacttgtaattgatgcttttgatttatattctcaaatgcttctcaagagaatttc |
24739697 |
T |
|
| Q |
168 |
tcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgtt |
245 |
Q |
| |
|
|||| ||| ||||||| ||||||||||| | ||| | | ||| |||||| ||||||||| ||| |||||||||| |
|
|
| T |
24739696 |
tcctgatgtcatcacttacaatactttaatgtatggctgtttgattgtgggtcgattgaaagaagcagttggtttgtt |
24739619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 25450625 - 25450710
Alignment:
| Q |
177 |
tgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattgg |
262 |
Q |
| |
|
||||||||||| |||||||||| |||| || |||||| | ||| |||||||||| ||| ||| |||||| ||||||||||||||| |
|
|
| T |
25450625 |
tgtcacttatagtactttaattcgtggcttttgcattgttggtaaattgaaagaagcagttgatttgtttaataaaatgatattgg |
25450710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 255
Target Start/End: Original strand, 30148963 - 30149112
Alignment:
| Q |
106 |
aaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtt |
205 |
Q |
| |
|
|||||||| ||||||| | ||| | ||||||||||| ||||||| ||| ||| | |||| ||||| ||| ||||||| |||||| |||| | ||||| |
|
|
| T |
30148963 |
aaagataagcttgttagtgatgggtatgatttatattctgaaatgattgttaacaaaattcatcctaatgtcatcacttacaatactctaatatatggtt |
30149062 |
T |
|
| Q |
206 |
tatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatg |
255 |
Q |
| |
|
| | |||| |||||||| ||||||| ||| ||||||||||| || ||||| |
|
|
| T |
30149063 |
tttccattttgggtcaaatgaaagaagcagttggtttgttaaatcaaatg |
30149112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 24726258 - 24726324
Alignment:
| Q |
101 |
tgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttg |
167 |
Q |
| |
|
||||||||||||||||| | | | | | ||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
24726258 |
tgtgcaaagataaacttctaattgaaacatttgatttatattatgaaatggttgataagagcatttg |
24726324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 29954158 - 29954020
Alignment:
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| ||||||| ||| |||| ||||| ||||| |||||||||||| | |||||||| | ||| || |||||| |||| | |||||||| |
|
|
| T |
29954158 |
tgatttatattctgaaatgattgtcaagaaaatttctcctaatgttgtcacttacacgactttaatatatggcttttgcattgtgggacggttgaaagaa |
29954059 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||| || ||||||| || ||||| | ||| |||||||| |
|
|
| T |
29954058 |
gcagttaatttgttaaatcaaatgttgttgaaaaacatc |
29954020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 270
Target Start/End: Complemental strand, 54338 - 54100
Alignment:
| Q |
32 |
tgctgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttt |
131 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||| ||| ||| |||||||| || ||||||||||| ||| |||||||||| ||||||| ||||||| |
|
|
| T |
54338 |
tgctgagacgtgttgatggaaaattggttcagcttaatgcggtaatgtacaataccgttattgatggtatgtataaagataaacatgttaatgatgcttt |
54239 |
T |
|
| Q |
132 |
tgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagat |
231 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| ||| |||||| ||||| | | |||||||| | || || | |||| | ||| || |||||||| |
|
|
| T |
54238 |
tgatttatattctgaaatggttgcaaagagaatttctcccgatgttgttacttacagtgctttaattagagggtttttcattgttggtaaactgaaagat |
54139 |
T |
|
| Q |
232 |
gcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
54138 |
gcaattgatctgtttaataaaatgatattggaaaacatc |
54100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 270
Target Start/End: Original strand, 21711 - 21943
Alignment:
| Q |
38 |
gacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgattt |
137 |
Q |
| |
|
|||||| |||||| ||||| |||| | ||||||||| |||||||| || ||||| |||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
21711 |
gacgaaatgatggaaaattagttcagcctgatgtggtaatgtacaataccattatcgatggtatgtgtaaagataaacatgttaatgatgcttttgattt |
21810 |
T |
|
| Q |
138 |
atattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaatt |
237 |
Q |
| |
|
||||| ||||| |||| |||||||||||| || |||| ||||||| ||| |||||||| |||| || |||||| | ||| ||||||||||||||||| |
|
|
| T |
21811 |
atattctgaaaaggtttctaagagaattttccccgatgttttcacttacaatgctttaattagtggcttttgcattgttggtaaattgaaagatgcaatt |
21910 |
T |
|
| Q |
238 |
ggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
| ||| || ||||||||| || | |||||||| |
|
|
| T |
21911 |
gatttattcaataaaatgacatcgaaaaacatc |
21943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 269
Target Start/End: Complemental strand, 15063510 - 15063276
Alignment:
| Q |
35 |
tgagacgaattgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttga |
134 |
Q |
| |
|
||||||| ||||||| ||||||||||| | | ||||||| ||||| | ||||||||||||| || |||| || |||||||||||||| |||||||||| |
|
|
| T |
15063510 |
tgagacgggttgatggaaaattggttcggcctaatgtggtaatgtatagcacgattattgatagtatgtgtaaggataaacttgttaacgatgcttttga |
15063411 |
T |
|
| Q |
135 |
tttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgca |
234 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||| |||| ||| |||||||||| | |||||||| |||| || ||| || | ||| |||||||| |||| |
|
|
| T |
15063410 |
tttatattgtgaaatggtttctaaaagaatttctcctgatgtagtcacttatagttctttaattagtggcttttgcgttgttggtaaattgaaatatgct |
15063311 |
T |
|
| Q |
235 |
attggtttgttacataaaatgatattggaaaacat |
269 |
Q |
| |
|
||| |||||| ||| |||||||| ||| ||||| |
|
|
| T |
15063310 |
gttgatttgtttaatagaatgatatcggacaacat |
15063276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 68 - 270
Target Start/End: Complemental strand, 105339 - 105137
Alignment:
| Q |
68 |
atgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttg |
167 |
Q |
| |
|
||||||| ||||| ||||| | |||||| || ||||||||||||||||||| | | |||| | ||| ||||| | ||||||| || | |||| ||||| |
|
|
| T |
105339 |
atgtggtaatgtataacacagtcattgatagtttgtgcaaagataaacttgtaagtgatgcatatgagttatactctgaaatgattacaaagaaaatttc |
105240 |
T |
|
| Q |
168 |
tcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaac |
267 |
Q |
| |
|
||||||||||||||||| || | || |||||| ||| || |||||| | |||||||||||||| ||| |||||||| | ||| ||||| ||||| ||||| |
|
|
| T |
105239 |
tcctactgttgtcacttttagtgctctaatttatgggttttgcattgttggtcaattgaaagaagcatttggtttggtccatcaaatggtattgaaaaac |
105140 |
T |
|
| Q |
268 |
atc |
270 |
Q |
| |
|
||| |
|
|
| T |
105139 |
atc |
105137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 270
Target Start/End: Original strand, 136771 - 136974
Alignment:
| Q |
67 |
gatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaattt |
166 |
Q |
| |
|
|||||||| ||||| | || ||||||||| || |||| |||||||||||||| | | |||||| ||| ||||||| ||||||| |||| |||| ||||| |
|
|
| T |
136771 |
gatgtggtaatgtatagcataattattgatagtttgtgtaaagataaacttgtaattgatgcttatgagttatattctgaaatgattgcaaagacaattt |
136870 |
T |
|
| Q |
167 |
gtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaa |
266 |
Q |
| |
|
|||| ||||||||||| ||| || |||| | ||| || |||||| | |||| ||||||||| ||| |||||||||| ||| ||||| ||||| |||| |
|
|
| T |
136871 |
ctcctgatgttgtcactttcaattctctaatctatggattttgcattgttggtcgattgaaagaagcatttggtttgttccatcaaatggtattgaaaaa |
136970 |
T |
|
| Q |
267 |
catc |
270 |
Q |
| |
|
|||| |
|
|
| T |
136971 |
catc |
136974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 121932 - 121870
Alignment:
| Q |
208 |
tgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||| | |||||||||||||| ||| |||||||||| ||| ||||| ||||| |||||||| |
|
|
| T |
121932 |
tgcattgttggtcaattgaaagaagcatttggtttgttccatgaaatgctattgaaaaacatc |
121870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1840 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1840
Description:
Target: scaffold1840; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 830 - 1009
Alignment:
| Q |
91 |
attgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataata |
190 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| |||| | ||| ||||||| ||||||| || | |||||||||| |||||||||||||||| ||| |
|
|
| T |
830 |
attgatggtttgtgcaaagataaacttgtaaatgatgcatatgagttatattctgaaatgattacaaagagaatttctcctactgttgtcactctcaatt |
929 |
T |
|
| Q |
191 |
ctttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| |||| | ||| | |||||| | |||||||| ||||| ||| |||||||| | | | ||||| ||||| |||||||| |
|
|
| T |
930 |
ctctaatctatggatattgcattgttggtcaattcaaagaagcatttggtttgctccgtgaaatggtattgaaaaacatc |
1009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 2652 - 2831
Alignment:
| Q |
91 |
attgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataata |
190 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| |||| | ||| ||||||| ||||||| || | |||||||||| |||||||||||||||| ||| |
|
|
| T |
2652 |
attgatggtttgtgcaaagataaacttgtaaatgatgcatatgagttatattctgaaatgattacaaagagaatttctcctactgttgtcactctcaatt |
2751 |
T |
|
| Q |
191 |
ctttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| |||| | ||| | |||||| | |||||||| ||||| ||| |||||||| | | | ||||| ||||| |||||||| |
|
|
| T |
2752 |
ctctaatctatggatattgcattgttggtcaattcaaagaagcatttggtttgctccgtgaaatggtattgaaaaacatc |
2831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 44263207 - 44262992
Alignment:
| Q |
55 |
ttggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttg |
154 |
Q |
| |
|
|||||||| | | ||||||| |||||||| || |||||| || || |||||||| |||||||| | | | |||| | || ||||| || ||||||| ||| |
|
|
| T |
44263207 |
ttggttcggcctaatgtggtcatgtacaatacaattattcatagtttgtgcaaaaataaacttataattgatgcctctgctttatgttctgaaatgattg |
44263108 |
T |
|
| Q |
155 |
ctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgttacataaaat |
254 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||| |||| ||| || || ||| |||||||||| ||||| ||| ||||||||||| || |||| |
|
|
| T |
44263107 |
tcaagagaatttttccggatgttgtcacttatactactctaatacatggcttttgtattgtgggtcaatttaaagaagcagttggtttgttaaatcaaat |
44263008 |
T |
|
| Q |
255 |
gatattggaaaacatc |
270 |
Q |
| |
|
| | ||| |||||||| |
|
|
| T |
44263007 |
gttgttgaaaaacatc |
44262992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 246
Target Start/End: Complemental strand, 44472 - 44292
Alignment:
| Q |
66 |
tgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatattatgaaatggttgctaagagaatt |
165 |
Q |
| |
|
|||||| || ||||||||||| || ||||| || | || |||||||| ||||||| | ||| | ||||||||||| ||||||| ||| ||||| |||| |
|
|
| T |
44472 |
tgatgtcgttatgtacaacacaatcattgacagtctctgtaaagataagcttgttagtgatgggtatgatttatattctgaaatgattgttaagaaaatt |
44373 |
T |
|
| Q |
166 |
tgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggtttgtta |
246 |
Q |
| |
|
| |||| || ||||||| |||||| |||| | |||||| | ||| |||||||| ||||||| ||| ||||||||||| |
|
|
| T |
44372 |
tatcctgatgccatcacttacaatactctaatatatggtttttctattttgggtcaaatgaaagaagcagttggtttgtta |
44292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 5653 - 5796
Alignment:
| Q |
127 |
gcttttgatttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattga |
226 |
Q |
| |
|
|||| ||| ||||||| | ||||| ||| |||| ||||| |||| ||||||||||| ||| ||||||| | ||| || |||||| | |||||||||| |
|
|
| T |
5653 |
gcttatgagttatattctcaaatgattgtaaagaaaatttctcctgatgttgtcactttcaattctttaatctatggattttgcattgttggtcaattga |
5752 |
T |
|
| Q |
227 |
aagatgcaattggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||| ||| |||||||||| ||| ||||| ||||| |||||||| |
|
|
| T |
5753 |
tagaagcatttggtttgttccatgaaatggtattgaaaaacatc |
5796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 270
Target Start/End: Complemental strand, 43913 - 43686
Alignment:
| Q |
43 |
attgatgggaaattggttcgacttgatgtggtgatgtacaacacgattattgatggtgtgtgcaaagataaacttgttaattatgcttttgatttatatt |
142 |
Q |
| |
|
|||||||||||||||||| || ||||| | ||| ||||||| ||||||||| || |||| ||||| ||| | || | | |||| ||| ||||||| |
|
|
| T |
43913 |
attgatgggaaattggttaacattaatgtgttaatgcacaacacaattattgatagtttgtgtaaagagaaattggtgaccgaggcttatgagttatatt |
43814 |
T |
|
| Q |
143 |
atgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaattggttt |
242 |
Q |
| |
|
| ||||| ||| |||| ||||| |||| ||||||||||| ||| ||||||| | ||| || ||| || | |||||||||| ||| ||| ||||||| |
|
|
| T |
43813 |
ctcaaatgattgtaaagaaaatttctcctgatgttgtcactttcaattctttaatctatggattttgctttgttggtcaattgatagaagcatttggttt |
43714 |
T |
|
| Q |
243 |
gttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
||| ||| ||||| ||||| |||||||| |
|
|
| T |
43713 |
gttccatgaaatggtattgaaaaacatc |
43686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 1753 - 1619
Alignment:
| Q |
136 |
ttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaa |
235 |
Q |
| |
|
||||||| ||||||| || | |||||||||| ||| ||||||||||| || | || | |||| ||| || |||||| | |||||| ||||||| ||| |
|
|
| T |
1753 |
ttatattctgaaatgattacaaagagaatttctcccgatgttgtcacttttagtgctctgatttatggattttgcattgttggtcaactgaaagaagcat |
1654 |
T |
|
| Q |
236 |
ttggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|||||||||| || ||||| ||||| |||||||| |
|
|
| T |
1653 |
ttggtttgtttcacgaaatggtattgaaaaacatc |
1619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 126656 - 126522
Alignment:
| Q |
136 |
ttatattatgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgcattatgggtcaattgaaagatgcaa |
235 |
Q |
| |
|
||||||| ||||||| || | |||||||||| ||| | ||||||||||| ||| || |||||| ||| || || ||| | |||||||| |||||||| |
|
|
| T |
126656 |
ttatattctgaaatgattacaaagagaatttctcccaatgttgtcactttcaattctctaatttatggattttgtattgttggtcaattcaaagatgcgt |
126557 |
T |
|
| Q |
236 |
ttggtttgttacataaaatgatattggaaaacatc |
270 |
Q |
| |
|
|| ||||||| ||| |||| ||||| |||||||| |
|
|
| T |
126556 |
ttcgtttgttccatgaaatagtattgaaaaacatc |
126522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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