View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10835_low_13 (Length: 282)
Name: NF10835_low_13
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10835_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 36621962 - 36622238
Alignment:
| Q |
1 |
tgtcaaattcgaaaacctagataatagctattaggaagtggggaagcaatattaatccctacacctaaaaatccattagctccaatatttgatgaagaaa |
100 |
Q |
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| T |
36621962 |
tgtcaaattcgaaaacctagataatagctattaggaagtggggaagcaatattaatccctacacctaaaaatccattagctccaatatttgatgaagaaa |
36622061 |
T |
|
| Q |
101 |
cattggattgttccatcatgcatttgctagcaatttttccaagattcttcctcaggtcctcaatagaaacctttaactggagcaattcattcaagccaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36622062 |
cattggattgttccatcatgcatttgctagcaatttttccaagattcttcctgaggtcctcaatagaaacctttaattggagcaattcattcaagccaag |
36622161 |
T |
|
| Q |
201 |
ttcatcaacagggctttcccaccaaaattgcatttgcctagcttttctcacatgatctatctcttccctttgcttct |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
36622162 |
ttcatcaacagggctttcccaccaaaattgcatttgcctagcttttctcacatgatctatctcttccccttgcttct |
36622238 |
T |
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