View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10835_low_21 (Length: 239)

Name: NF10835_low_21
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10835_low_21
NF10835_low_21
[»] chr8 (16 HSPs)
chr8 (116-223)||(24096287-24096394)
chr8 (11-75)||(20714091-20714154)
chr8 (166-223)||(9419453-9419510)
chr8 (11-75)||(7789181-7789244)
chr8 (18-75)||(12767653-12767709)
chr8 (18-75)||(18143538-18143594)
chr8 (18-75)||(20044840-20044896)
chr8 (18-75)||(25037135-25037191)
chr8 (18-75)||(25051172-25051228)
chr8 (11-71)||(15833976-15834036)
chr8 (18-75)||(12925376-12925432)
chr8 (18-75)||(18251851-18251907)
chr8 (18-75)||(20030201-20030257)
chr8 (18-75)||(42712287-42712343)
chr8 (1-49)||(24096168-24096216)
chr8 (13-49)||(24634015-24634051)
[»] chr6 (10 HSPs)
chr6 (8-223)||(14102184-14102395)
chr6 (11-75)||(10259881-10259945)
chr6 (4-69)||(11421546-11421611)
chr6 (11-75)||(23895719-23895782)
chr6 (11-75)||(18420573-18420636)
chr6 (11-71)||(23110321-23110381)
chr6 (30-72)||(12415086-12415128)
chr6 (11-48)||(12173469-12173506)
chr6 (18-75)||(23884514-23884570)
chr6 (18-73)||(17512332-17512385)
[»] chr1 (10 HSPs)
chr1 (88-223)||(5378633-5378768)
chr1 (11-75)||(26906348-26906412)
chr1 (13-75)||(5378529-5378591)
chr1 (11-75)||(40999138-40999202)
chr1 (15-75)||(30676810-30676870)
chr1 (15-71)||(15810091-15810146)
chr1 (176-223)||(12301535-12301582)
chr1 (18-75)||(14272127-14272183)
chr1 (18-75)||(14281993-14282049)
chr1 (18-67)||(28310121-28310170)
[»] chr3 (18 HSPs)
chr3 (11-75)||(7784110-7784174)
chr3 (1-75)||(32877889-32877963)
chr3 (88-224)||(7784216-7784352)
chr3 (15-75)||(17529967-17530027)
chr3 (11-75)||(38529280-38529343)
chr3 (15-75)||(48978689-48978749)
chr3 (15-75)||(48988229-48988289)
chr3 (15-75)||(54624674-54624734)
chr3 (11-75)||(4951615-4951678)
chr3 (11-75)||(24794649-24794712)
chr3 (88-155)||(4361721-4361788)
chr3 (30-75)||(4361634-4361679)
chr3 (18-75)||(23487063-23487119)
chr3 (18-75)||(46305682-46305738)
chr3 (11-75)||(28367756-28367819)
chr3 (11-75)||(28375574-28375637)
chr3 (11-75)||(28383396-28383459)
chr3 (11-73)||(28351823-28351884)
[»] chr2 (8 HSPs)
chr2 (8-78)||(18578704-18578774)
chr2 (11-75)||(24022845-24022908)
chr2 (11-75)||(31710569-31710632)
chr2 (138-223)||(14273048-14273132)
chr2 (15-75)||(1791018-1791078)
chr2 (15-75)||(1800512-1800572)
chr2 (11-75)||(22632421-22632485)
chr2 (11-75)||(14273226-14273289)
[»] scaffold0269 (1 HSPs)
scaffold0269 (15-75)||(14920-14980)
[»] scaffold0040 (2 HSPs)
scaffold0040 (11-75)||(10064-10127)
scaffold0040 (30-75)||(30945-30989)
[»] chr5 (17 HSPs)
chr5 (11-75)||(22489207-22489270)
chr5 (18-71)||(22118212-22118265)
chr5 (15-75)||(5600599-5600659)
chr5 (15-75)||(5610245-5610305)
chr5 (11-75)||(24412850-24412913)
chr5 (11-75)||(30454304-30454367)
chr5 (15-75)||(31150741-31150801)
chr5 (11-74)||(30459362-30459424)
chr5 (18-75)||(11223398-11223454)
chr5 (11-75)||(18569061-18569124)
chr5 (11-75)||(24422299-24422362)
chr5 (11-75)||(30444932-30444995)
chr5 (11-75)||(4635967-4636030)
chr5 (27-78)||(1693784-1693835)
chr5 (13-75)||(42732681-42732742)
chr5 (18-75)||(13815482-13815538)
chr5 (18-71)||(16110907-16110960)
[»] chr4 (14 HSPs)
chr4 (15-75)||(23622938-23622998)
chr4 (11-73)||(15843001-15843062)
chr4 (11-75)||(37059108-37059171)
chr4 (16-75)||(16489947-16490006)
chr4 (11-75)||(3242390-3242453)
chr4 (11-75)||(26812530-26812593)
chr4 (11-75)||(26821997-26822060)
chr4 (11-75)||(54690016-54690079)
chr4 (11-75)||(54699447-54699510)
chr4 (88-155)||(18125617-18125684)
chr4 (30-75)||(18125530-18125575)
chr4 (11-75)||(3918088-3918151)
chr4 (8-57)||(45609486-45609535)
chr4 (18-75)||(50516607-50516663)
[»] scaffold0482 (1 HSPs)
scaffold0482 (11-75)||(3555-3618)
[»] scaffold0247 (1 HSPs)
scaffold0247 (15-75)||(24612-24672)
[»] scaffold0021 (2 HSPs)
scaffold0021 (15-75)||(100002-100062)
scaffold0021 (18-75)||(124069-124125)
[»] chr7 (11 HSPs)
chr7 (11-75)||(15174562-15174625)
chr7 (11-78)||(7593025-7593091)
chr7 (18-74)||(32818019-32818074)
chr7 (19-78)||(19352699-19352758)
chr7 (30-75)||(4306677-4306723)
chr7 (29-75)||(9736968-9737013)
chr7 (18-75)||(11634439-11634495)
chr7 (18-75)||(14634887-14634943)
chr7 (18-75)||(14644587-14644643)
chr7 (18-75)||(15947482-15947538)
chr7 (18-75)||(33292286-33292342)
[»] scaffold0028 (2 HSPs)
scaffold0028 (11-75)||(94534-94597)
scaffold0028 (11-75)||(103975-104038)
[»] scaffold0001 (1 HSPs)
scaffold0001 (11-74)||(408351-408413)
[»] scaffold0223 (1 HSPs)
scaffold0223 (18-75)||(27166-27223)
[»] scaffold0206 (1 HSPs)
scaffold0206 (18-75)||(2131-2187)
[»] scaffold0101 (1 HSPs)
scaffold0101 (27-75)||(42085-42133)


Alignment Details
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 24096287 - 24096394
Alignment:
Q  116 gaatagacttcagaacacgattcactttatatgatgagatgggtttgagatcggatttacacttaactcgggtttgagggtatgatgatatgaaaacact 215  Q
    |||||||||| |||||||||| | |||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||| ||| || |||||    
T  24096287 gaatagacttgagaacacgataccctttatatgacgagatgggtttgtgatcggatttacactcaactcgtgtttgagggtatgatgctataaacacact 24096386  T
Q  216 cacaatat 223  Q
    ||||||||    
T  24096387 cacaatat 24096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 20714154 - 20714091
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20714154 tgactagcactataagatcttgatcacaccagatcagtctgttaca-cctgtattatcaacctca 20714091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 9419510 - 9419453
Alignment:
Q  166 tcggatttacacttaactcgggtttgagggtatgatgatatgaaaacactcacaatat 223  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||    
T  9419510 tcggatttacactcaactcgtgtttgagggtgtgatgatatgaacacactcacaatat 9419453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 7789181 - 7789244
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |||||||||||||||||    
T  7789181 tgactagcactacaatttcttgatcacaccagatcagtctgtaac-ctctgtattatcaacctca 7789244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 12767709 - 12767653
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || |||||||||||||||||||    
T  12767709 cactataaggtcttgatcacaccagatcagtccgtaac-ccctgtattatcaacctca 12767653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 18143538 - 18143594
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || || ||||||||||||||||    
T  18143538 cactataaggtcttgatcacaccagatcagtctgtaac-ccttgtattatcaacctca 18143594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 20044896 - 20044840
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || |||||||||||||||||||    
T  20044896 cactataaggtcttgatcacaccagatcagtccgtaac-ccctgtattatcaacctca 20044840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 25037135 - 25037191
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || | |||||||||||||||||    
T  25037135 cactataaagtcttgatcacaccagatcagtctgtaac-ctctgtattatcaacctca 25037191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 25051172 - 25051228
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || | |||||||||||||||||    
T  25051172 cactataatgtcttgatcacaccagatcagtctgtaac-ctctgtattatcaacctca 25051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 15834036 - 15833976
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaac 71  Q
    ||||||||||||||| ||||||| || ||||||| |||  ||||| |||||||||||||||    
T  15834036 tgactagcactataagttcttgaccataccagataagttcgttactccctgtattatcaac 15833976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 12925432 - 12925376
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  12925432 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 12925376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 18251907 - 18251851
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||| ||||||||||||| ||||||| ||| || | |||||||||||||||||    
T  18251907 cactataacgtcttgatcacacccgatcagtttgtaac-ctctgtattatcaacctca 18251851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 20030257 - 20030201
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| | ||  |||||||||||||||||||    
T  20030257 cactataaggtcttgatcacaccagatcagtccg-taatccctgtattatcaacctca 20030201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 42712287 - 42712343
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  42712287 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 42712343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24096168 - 24096216
Alignment:
Q  1 cataaaattttgactagcactataacttcttgatcacaccagatcagtc 49  Q
    |||||| ||||||||||||||| || |||||||| |||||| |||||||    
T  24096168 cataaacttttgactagcactacaagttcttgattacaccatatcagtc 24096216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 24634051 - 24634015
Alignment:
Q  13 actagcactataacttcttgatcacaccagatcagtc 49  Q
    |||||||||||||  ||||||||||||||||||||||    
T  24634051 actagcactataaggtcttgatcacaccagatcagtc 24634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 14102395 - 14102184
Alignment:
Q  8 ttttgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctcatcactataaatcttacaattctttctcaaact 107  Q
    |||||||||||||| |||  ||||||||||| |||||||| ||||||||||||||||||| ||||||| ||     | |  |||||||||||||||||||    
T  14102395 ttttgactagcactgtaaggtcttgatcacaacagatcagcctgttacaccctgtattattaacctcagcag----acttctacaattctttctcaaact 14102300  T
Q  108 atttttatgaatagacttcagaac-acgattcactttatatgatgagatgggtttgagatcggatttacacttaactcgggtttgagggtatgatgatat 206  Q
    ||| ||  | |||||||| ||||  || || ||||||  |||| |||||||||||| ||||| ||||||||| |||||| ||||||||||||||||| ||    
T  14102299 attgtttgggatagacttaagaattacaatacactttgcatga-gagatgggtttgggatcgaatttacactcaactcgtgtttgagggtatgatgaaat 14102201  T
Q  207 gaaaacactcacaatat 223  Q
     || ||||||| |||||    
T  14102200 aaacacactcagaatat 14102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 10259881 - 10259945
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  10259881 tgactagcactataaattcttgatcacaccagatcagtccgttacaccctgtattataaacctca 10259945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11421546 - 11421611
Alignment:
Q  4 aaaattttgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatca 69  Q
    |||||| |||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  11421546 aaaattctgactaacactataagatcttgatcacaccagatcagtctgttacaccatgtattatca 11421611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 23895719 - 23895782
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23895719 tgactagcactacaatatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 23895782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 18420636 - 18420573
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||||||  |  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  18420636 tgactagcactaacaaatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 18420573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23110321 - 23110381
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaac 71  Q
    ||||||||||||||  |||||||||||||||||| ||||| ||||||||  ||||||||||    
T  23110321 tgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaac 23110381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 12415128 - 12415086
Alignment:
Q  30 ttgatcacaccagatcagtctgttacaccctgtattatcaacc 72  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||    
T  12415128 ttgatcacaccagatcagtccgttacactctgtattattaacc 12415086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 12173506 - 12173469
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagt 48  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  12173506 tgactagcaccataaattcttgatcacaccagatcagt 12173469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 23884570 - 23884514
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  23884570 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 23884514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 17512332 - 17512385
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacct 73  Q
    ||||||||  |||||||||||| ||||||||||||   ||||||||||||||||||    
T  17512332 cactataaagtcttgatcacactagatcagtctgt--aaccctgtattatcaacct 17512385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 5378633 - 5378768
Alignment:
Q  88 ttacaattctttctcaaactatttttatgaatagacttcagaac-acgattcactttatatgatgagatgggtttgagatcggatttacacttaactcgg 186  Q
    ||||||||||||||||||||||  ||| | |||||||| ||||  || || |||||| ||||| |||||||||||| ||||| ||||||||| ||||||     
T  5378633 ttacaattctttctcaaactatcgttacggatagacttaagaattacaatacactttgtatga-gagatgggtttgggatcgaatttacactcaactcgt 5378731  T
Q  187 gtttgagggtatgatgatatgaaaacactcacaatat 223  Q
    ||||||||||||||||||||||| |||| || |||||    
T  5378732 gtttgagggtatgatgatatgaacacacgcagaatat 5378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26906348 - 26906412
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  26906348 tgactagcactataagttcttggtcacaccagatcagtctgttacactctgtattatcaacctca 26906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 5378529 - 5378591
Alignment:
Q  13 actagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  5378529 actagcactataaggtcttgatcacaccagatcagtctgttacaccctatattataaacctca 5378591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 40999138 - 40999202
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  40999138 tgactagcactataaggttttgatcacaccagatcagtttgttacaccatgtattatcaacctca 40999202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 30676870 - 30676810
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  30676870 tagcactatatgttcttgatcacacaagatcagtctgttacactctgtattatcaatctca 30676810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 15810091 - 15810146
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaac 71  Q
    |||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||    
T  15810091 tagcactataaggtcttgatcacaccagatcagtccgttaca-cctgtattatcaac 15810146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 12301582 - 12301535
Alignment:
Q  176 acttaactcgggtttgagggtatgatgatatgaaaacactcacaatat 223  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  12301582 acttaactcgtgtttgagggtatgatgatatgaacacactcagaatat 12301535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14272127 - 14272183
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  14272127 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 14272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14281993 - 14282049
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  14281993 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 14282049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 28310121 - 28310170
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattat 67  Q
    |||||||| || |||||||||||||||||||| ||||||  |||||||||    
T  28310121 cactataagttgttgatcacaccagatcagtccgttacagtctgtattat 28310170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 7784110 - 7784174
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7784110 tgactaacactataaggtcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 7784174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32877963 - 32877889
Alignment:
Q  1 cataaaattttgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||| || ||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  32877963 cataaacttctgaataacactataatttgttgatcacaccagatcagtctgttacactctgtattatcaacctca 32877889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 224
Target Start/End: Original strand, 7784216 - 7784352
Alignment:
Q  88 ttacaattctttctcaaactatttttatgaatagacttcagaac-acgattcactttatatgatgagatgggtttgagatcggatttacacttaactcgg 186  Q
    ||||||||||||||||||||||  ||| | |||||||| ||||  || || |||||  |||| ||| ||||||||| ||||| ||||||||| ||||       
T  7784216 ttacaattctttctcaaactatcgttacggatagacttaagaattacaatacacttggtatg-tgaaatgggtttgggatcgaatttacactcaactatt 7784314  T
Q  187 gtttgagggtatgatgatatgaaaacactcacaatatt 224  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  7784315 gtttgagggtatgataatatgaacacactcacaatatt 7784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 17529967 - 17530027
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  17529967 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 17530027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 38529280 - 38529343
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  38529280 tgactagcactataagatcttgatcacaccagatgagtctgttaca-cttgtattatcaacctca 38529343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 48978749 - 48978689
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  48978749 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 48978689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 48988289 - 48988229
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  48988289 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 48988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 54624734 - 54624674
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | ||||||| |||||||||||||||||||| |||||||||||||||||    
T  54624734 tagcactataatatgttgatcataccagatcagtctgttacactctgtattatcaacctca 54624674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 4951678 - 4951615
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  | ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  4951678 tgactagcactacaaggtattggtcacaccagatcagtctgttaca-cctgtattatcaacctca 4951615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 24794649 - 24794712
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  24794649 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 24794712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 4361721 - 4361788
Alignment:
Q  88 ttacaattctttctcaaactatttttatgaatagacttcagaacacgattcactttatatgatgagat 155  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||| ||  ||||| ||| |||||||    
T  4361721 ttacaattctttctcaaactattgttacgaatagacttaagaacacaataaactttgtataatgagat 4361788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 4361634 - 4361679
Alignment:
Q  30 ttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  4361634 ttgatcacaacagatcattctgttacaccttgtattatcaacctca 4361679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 23487119 - 23487063
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || || ||||||||||||||||    
T  23487119 cactataaggtcttgatcacaccagatcagtctgtaac-ccttgtattatcaacctca 23487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 46305682 - 46305738
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || | |||||||||||||||||    
T  46305682 cactataaggtcttgatcacaccagatcagtctgtaac-cactgtattatcaacctca 46305738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 28367756 - 28367819
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  28367756 tgactagcactacaatatcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 28367819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 28375574 - 28375637
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  28375574 tgactagcactacaatatcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 28375637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 28383396 - 28383459
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  28383396 tgactagcactacaatatcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 28383459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 28351823 - 28351884
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacct 73  Q
    |||||||||||| ||  |||||||||||||||||||||| || || | |||||||||||||||    
T  28351823 tgactagcactacaatatcttgatcacaccagatcagtccgtaac-ctctgtattatcaacct 28351884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 18578774 - 18578704
Alignment:
Q  8 ttttgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctcatca 78  Q
    |||||||||| ||||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  18578774 ttttgactaggactataagttcttgataacaccagaccaatctgttacaccctgtattatcaacctcatca 18578704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 24022845 - 24022908
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24022845 tgactagcactataagatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 24022908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 31710569 - 31710632
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  31710569 tgactagcactataagatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 31710632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 14273132 - 14273048
Alignment:
Q  138 cactttatatgatgagatgggtttgagatcggatttacacttaactcgggtttgagggtatgatgatatgaaaacactcacaatat 223  Q
    |||||| ||||| |||||||||||| ||  | ||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||    
T  14273132 cactttgtatga-gagatgggtttgggacggaatttacactcaactcgtgtttgagggtatgatgatatgaacacactcagaatat 14273048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 1791078 - 1791018
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  1791078 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 1791018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 1800572 - 1800512
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  1800572 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 1800512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22632485 - 22632421
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||| ||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  22632485 tgactaacactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 22632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 14273289 - 14273226
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  |||| ||||||||| |||||||||||||| ||| ||||||||||||||    
T  14273289 tgactagcactataagatcttaatcacaccatatcagtctgttaca-cctatattatcaacctca 14273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 14920 - 14980
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||||    
T  14920 tagcactataatatgttgatcacaccagatcagtctgttacactctgtattatcaacctca 14980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 10127 - 10064
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10127 tgactagcactataaggtctagatcacaccagatcagtctgttaca-cctgtattatcaacctca 10064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 30945 - 30989
Alignment:
Q  30 ttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||    
T  30945 ttgatcacaccagatcagtcagtaaca-cctgtattatcaacctca 30989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22489270 - 22489207
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  22489270 tgactagcactataagatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 22489207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 22118212 - 22118265
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaac 71  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  22118212 cactataaggtcttgatcacaccagatcagtctgttacatcctgtattatcaac 22118265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5600659 - 5600599
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  5600659 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 5600599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5610305 - 5610245
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  5610305 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 5610245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24412913 - 24412850
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |||||||||||||||||    
T  24412913 tgactagcactacaatttcttgatcacaccagatcagtctgtaac-ctctgtattatcaacctca 24412850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30454304 - 30454367
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  30454304 tgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattatcaacctca 30454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 31150741 - 31150801
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  31150741 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 31150801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 30459362 - 30459424
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctc 74  Q
    |||||||||||| || ||||||||||||||||||||||| || ||| |||||||||||||||||    
T  30459362 tgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattatcaacctc 30459424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 11223454 - 11223398
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||    
T  11223454 cactataaggtcttgatcacaccagatcagtctgtaac-ccctgtattatcaacctca 11223398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 18569124 - 18569061
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  18569124 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 18569061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24422362 - 24422299
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  24422362 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 24422299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30444932 - 30444995
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || |||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  30444932 tgactagcactacaatttcttgatcacaccagatcagtccataaca-cctgtattatcaacctca 30444995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 4636030 - 4635967
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||| ||||||||||  |||||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  4636030 tgaccagcactataagatcttgatcacaccatatcagtccgttaca-cctgttttatcaacctca 4635967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 1693784 - 1693835
Alignment:
Q  27 ttcttgatcacaccagatcagtctgttacaccctgtattatcaacctcatca 78  Q
    ||||||||||| |||||||||||| ||||||| |||||| | ||||||||||    
T  1693784 ttcttgatcacgccagatcagtctattacaccatgtattgttaacctcatca 1693835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 42732681 - 42732742
Alignment:
Q  13 actagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||||  ||||||||||||||||||||||    || |||||||||||||||||||    
T  42732681 actagcactataaggtcttgatcacaccagatcagtccagaac-ccctgtattatcaacctca 42732742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 13815482 - 13815538
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  ||||||||||||||||||| ||||| || || ||||||||||||||||    
T  13815482 cactataaggtcttgatcacaccagatcattctgtaac-ccttgtattatcaacctca 13815538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 16110960 - 16110907
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaac 71  Q
    |||||||  ||||||||||||||||| || |||||||||  |||||||||||||    
T  16110960 cactatatgttcttgatcacaccagaccaatctgttacattctgtattatcaac 16110907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 23622998 - 23622938
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||||    
T  23622998 tagcactataatatgttgatcacaccagatcagtctgttacactctgtattatcaacctca 23622938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 15843001 - 15843062
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacct 73  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  15843001 tgactagcactataagatcttgatcacatcagatcagtctgttaca-cctgtattatcaacct 15843062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 37059171 - 37059108
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  37059171 tgactagcactacaagatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 37059108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 16489947 - 16490006
Alignment:
Q  16 agcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  16489947 agcactataatttgttgatcacaccatatcagtctgttacactcagtattatcaacctca 16490006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 3242390 - 3242453
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  3242390 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 3242453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 26812593 - 26812530
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| || ||| ||||||||||||||||||    
T  26812593 tgactagcactacaatatcttgatcacaccagatcagtccgtaaca-cctgtattatcaacctca 26812530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 26822060 - 26821997
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| || ||| ||||||||||||||||||    
T  26822060 tgactagcactacaatatcttgatcacaccagatcagtccgtaaca-cctgtattatcaacctca 26821997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 54690016 - 54690079
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  54690016 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 54690079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 54699447 - 54699510
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  54699447 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 54699510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 18125617 - 18125684
Alignment:
Q  88 ttacaattctttctcaaactatttttatgaatagacttcagaacacgattcactttatatgatgagat 155  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||| ||  ||||| ||| |||||||    
T  18125617 ttacaattctttctcaaactattgttacgaatagacttaagaacacaataaactttgtataatgagat 18125684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 18125530 - 18125575
Alignment:
Q  30 ttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  18125530 ttgatcacaacagatcattctgttacaccttgtattatcaacctca 18125575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3918151 - 3918088
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||| || || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  3918151 tgactagcattacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 3918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 45609535 - 45609486
Alignment:
Q  8 ttttgactagcactataacttcttgatcacaccagatcagtctgttacac 57  Q
    |||||| ||||||||||  | |||||||||||||||||| ||||||||||    
T  45609535 ttttgaatagcactatatgtccttgatcacaccagatcaatctgttacac 45609486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 50516607 - 50516663
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || || ||||||||||||||||    
T  50516607 cactataaggtcttgatcacaccagatcagtccgtaac-ccttgtattatcaacctca 50516663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3618 - 3555
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |||||||||||||||||    
T  3618 tgactagcactacaatttcttgatcacaccagatcagtctgtaac-ctctgtattatcaacctca 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 24672 - 24612
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||||||    
T  24672 tagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 24612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 100062 - 100002
Alignment:
Q  15 tagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||  | |||||||||||| ||||||||||||||| |||||||||||||||||    
T  100062 tagcactataatatgttgatcacaccaaatcagtctgttacactctgtattatcaacctca 100002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 124125 - 124069
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  124125 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 124069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 15174625 - 15174562
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| ||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15174625 tgactagcactacaagatcttgatcacaccagatcagtccgttaca-cctgtattatcaacctca 15174562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 7593091 - 7593025
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctcatca 78  Q
    |||||||||||| ||  |||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  7593091 tgactagcactacaatatcttgatcacaccagatcagtccgtaaca-cctgtattatcaacctcatca 7593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 32818074 - 32818019
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctc 74  Q
    ||||||||  ||||||||||||||||||||||||| || ||||||||||||||||||    
T  32818074 cactataaggtcttgatcacaccagatcagtctgtaac-ccctgtattatcaacctc 32818019  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 19352699 - 19352758
Alignment:
Q  19 actataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctcatca 78  Q
    ||||||| ||| |||||||||||||||  || ||||||||||||||||| ||||||||||    
T  19352699 actataaattcctgatcacaccagatctttccgttacaccctgtattatgaacctcatca 19352758  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 4306677 - 4306723
Alignment:
Q  30 ttgatcacaccagatcagtctg-ttacaccctgtattatcaacctca 75  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||    
T  4306677 ttgatcacaccagatcagtccgattacactctgtattatcaacctca 4306723  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 9737013 - 9736968
Alignment:
Q  29 cttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  9737013 cttgatcacaccagatcagtctg-tagcccctgtattatcaacctca 9736968  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11634439 - 11634495
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||| ||||||||||||| ||||||| ||| || | |||||||||||||||||    
T  11634439 cactataacgtcttgatcacacccgatcagtttgtaac-ctctgtattatcaacctca 11634495  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14634887 - 14634943
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  14634887 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 14634943  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14644587 - 14644643
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  14644587 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 14644643  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 15947482 - 15947538
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  15947482 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 15947538  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 33292286 - 33292342
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| || || | |||||||||||||||||    
T  33292286 cactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 33292342  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 94534 - 94597
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  94534 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 94597  T

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Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 103975 - 104038
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||||||||||||||||    
T  103975 tgactagcactacaatttcttgatcacaccagatcagtccgtaac-ctctgtattatcaacctca 104038  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 408413 - 408351
Alignment:
Q  11 tgactagcactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctc 74  Q
    |||||||||||| ||  ||||||||||||||||| |||| || ||| |||||||||||||||||    
T  408413 tgactagcactacaatatcttgatcacaccagattagtccgtaaca-cctgtattatcaacctc 408351  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 27166 - 27223
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||  ||||||||||||| |||||| |  ||||||| |||||||||||||||||    
T  27166 cactatatgttcttgatcacactagatcaattcgttacactctgtattatcaacctca 27223  T

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Target: scaffold0206 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 2187 - 2131
Alignment:
Q  18 cactataacttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    ||||||||  |||||||||||||||||||||| | ||  |||||||||||||||||||    
T  2187 cactataaggtcttgatcacaccagatcagtccg-taatccctgtattatcaacctca 2131  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 42085 - 42133
Alignment:
Q  27 ttcttgatcacaccagatcagtctgttacaccctgtattatcaacctca 75  Q
    |||||||||| || |||||||||| ||||| | ||||||||||||||||    
T  42085 ttcttgatcatactagatcagtctattacatcatgtattatcaacctca 42133  T

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