View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10835_low_29 (Length: 210)
Name: NF10835_low_29
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10835_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 49533872 - 49534046
Alignment:
| Q |
19 |
ggaagggaaacggagagcagtcttgaagggtaccggaatggcgtcgtaacgacggcaatcaactatttgtgtatgaatacattatctcatataccctaca |
118 |
Q |
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| T |
49533872 |
ggaagggaaacggagagcagtcttgaagggtaccggaatggcgtcgtaacgacgacaatcaactatttgtgtatgaatacattatctcatataccctaca |
49533971 |
T |
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| Q |
119 |
atcttacaaatatctgtagtcttcaatactttggccttacaaatgtatcactcgcagtaatggcatgcctaatat |
193 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
49533972 |
atcttacaaatatctgtagtcttcaatattttggccttacaaatgtatcactcgcagtaatgacatgcctaatat |
49534046 |
T |
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