View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10835_low_3 (Length: 404)

Name: NF10835_low_3
Description: NF10835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10835_low_3
NF10835_low_3
[»] chr8 (39 HSPs)
chr8 (174-389)||(30344373-30344588)
chr8 (264-385)||(24848004-24848125)
chr8 (174-221)||(2680234-2680281)
chr8 (61-112)||(32574478-32574529)
chr8 (66-112)||(27015385-27015431)
chr8 (176-262)||(28940714-28940799)
chr8 (174-220)||(32569575-32569621)
chr8 (175-221)||(4631640-4631686)
chr8 (175-221)||(18375557-18375603)
chr8 (175-221)||(36778476-36778522)
chr8 (175-221)||(41158640-41158686)
chr8 (176-221)||(40586443-40586488)
chr8 (174-221)||(8160418-8160465)
chr8 (174-221)||(8763009-8763056)
chr8 (174-221)||(24055837-24055884)
chr8 (175-217)||(2961008-2961050)
chr8 (175-221)||(7391318-7391364)
chr8 (175-217)||(27272686-27272728)
chr8 (176-221)||(1945184-1945229)
chr8 (174-210)||(12249910-12249946)
chr8 (174-210)||(23626054-23626090)
chr8 (174-218)||(27273877-27273921)
chr8 (174-210)||(39445261-39445297)
chr8 (174-210)||(41908017-41908053)
chr8 (70-109)||(4638747-4638786)
chr8 (174-221)||(25361511-25361558)
chr8 (174-221)||(25833996-25834043)
chr8 (176-215)||(27244398-27244437)
chr8 (174-221)||(41978855-41978902)
chr8 (172-215)||(42060658-42060701)
chr8 (176-210)||(29434280-29434314)
chr8 (174-215)||(6300487-6300528)
chr8 (176-217)||(11697110-11697151)
chr8 (176-221)||(25345992-25346037)
chr8 (174-219)||(36597310-36597355)
chr8 (174-215)||(37029917-37029958)
chr8 (174-218)||(5836239-5836283)
chr8 (174-218)||(22332003-22332047)
chr8 (174-218)||(30827035-30827079)
[»] chr6 (25 HSPs)
chr6 (173-389)||(18985189-18985404)
chr6 (61-112)||(1619790-1619841)
chr6 (59-109)||(19962466-19962516)
chr6 (174-262)||(11681668-11681756)
chr6 (174-221)||(24447791-24447838)
chr6 (175-221)||(1363219-1363265)
chr6 (176-221)||(4110057-4110102)
chr6 (174-218)||(6966235-6966279)
chr6 (174-217)||(18389166-18389209)
chr6 (174-217)||(33319049-33319092)
chr6 (174-221)||(35160119-35160166)
chr6 (175-213)||(875535-875573)
chr6 (175-221)||(15043827-15043873)
chr6 (180-220)||(1615103-1615143)
chr6 (61-109)||(2634772-2634820)
chr6 (175-210)||(1932347-1932382)
chr6 (175-218)||(2522023-2522066)
chr6 (174-217)||(5753125-5753168)
chr6 (175-217)||(2624721-2624763)
chr6 (175-221)||(9978707-9978753)
chr6 (176-221)||(1222381-1222426)
chr6 (175-215)||(13456734-13456774)
chr6 (178-210)||(29737644-29737676)
chr6 (176-220)||(33979182-33979226)
chr6 (175-219)||(35041995-35042039)
[»] chr5 (32 HSPs)
chr5 (176-389)||(23920113-23920325)
chr5 (264-385)||(39952558-39952679)
chr5 (173-221)||(13596915-13596963)
chr5 (174-221)||(1685046-1685093)
chr5 (175-221)||(34719454-34719500)
chr5 (175-221)||(36884780-36884826)
chr5 (176-221)||(3086433-3086478)
chr5 (176-221)||(25695539-25695584)
chr5 (174-221)||(752054-752101)
chr5 (178-221)||(14387898-14387941)
chr5 (174-217)||(36366123-36366166)
chr5 (175-217)||(7863528-7863570)
chr5 (173-219)||(20350823-20350869)
chr5 (175-217)||(22602634-22602676)
chr5 (175-221)||(43136273-43136319)
chr5 (173-218)||(4883070-4883115)
chr5 (176-221)||(41693138-41693183)
chr5 (176-217)||(42819330-42819371)
chr5 (173-217)||(32977099-32977143)
chr5 (174-218)||(34373667-34373711)
chr5 (175-210)||(5620643-5620678)
chr5 (175-210)||(9702716-9702751)
chr5 (175-210)||(9809820-9809855)
chr5 (175-218)||(17997459-17997502)
chr5 (176-219)||(19395652-19395695)
chr5 (176-210)||(12702061-12702095)
chr5 (175-209)||(38041490-38041524)
chr5 (175-212)||(4802095-4802132)
chr5 (173-221)||(30181407-30181458)
chr5 (173-218)||(38935347-38935392)
chr5 (174-218)||(10511663-10511707)
chr5 (174-206)||(33931125-33931157)
[»] scaffold0001 (2 HSPs)
scaffold0001 (270-388)||(12726-12844)
scaffold0001 (177-221)||(12951-12995)
[»] chr7 (32 HSPs)
chr7 (264-385)||(25350593-25350714)
chr7 (264-385)||(25356287-25356408)
chr7 (172-221)||(691285-691334)
chr7 (173-221)||(21669229-21669277)
chr7 (174-221)||(39278234-39278281)
chr7 (175-221)||(31896813-31896859)
chr7 (175-221)||(39647981-39648027)
chr7 (178-221)||(9151415-9151458)
chr7 (175-217)||(12960607-12960649)
chr7 (174-220)||(17817716-17817762)
chr7 (175-221)||(24682277-24682323)
chr7 (175-221)||(27732952-27732998)
chr7 (176-221)||(4850449-4850494)
chr7 (176-221)||(17172890-17172935)
chr7 (176-221)||(44806574-44806619)
chr7 (173-213)||(272588-272628)
chr7 (174-210)||(9226019-9226055)
chr7 (173-209)||(49023321-49023357)
chr7 (178-221)||(25731126-25731169)
chr7 (175-210)||(38434277-38434312)
chr7 (176-221)||(7854965-7855011)
chr7 (176-210)||(15595432-15595466)
chr7 (176-210)||(23476587-23476621)
chr7 (175-217)||(27840514-27840556)
chr7 (175-221)||(29469214-29469260)
chr7 (175-220)||(19049240-19049285)
chr7 (174-215)||(47573331-47573372)
chr7 (174-210)||(11834955-11834991)
chr7 (61-109)||(12807766-12807814)
chr7 (174-210)||(21597942-21597978)
chr7 (174-210)||(42996948-42996984)
chr7 (174-221)||(48527407-48527457)
[»] chr4 (40 HSPs)
chr4 (59-112)||(35534411-35534464)
chr4 (176-221)||(5483030-5483075)
chr4 (174-221)||(35707656-35707703)
chr4 (175-221)||(2118187-2118233)
chr4 (176-221)||(574177-574222)
chr4 (176-221)||(3759276-3759321)
chr4 (176-221)||(12680630-12680675)
chr4 (176-221)||(39713496-39713541)
chr4 (175-218)||(5759341-5759384)
chr4 (174-221)||(9887269-9887316)
chr4 (174-213)||(27892642-27892681)
chr4 (174-221)||(29713820-29713867)
chr4 (174-221)||(39404590-39404637)
chr4 (175-221)||(8964830-8964876)
chr4 (175-217)||(15650485-15650527)
chr4 (175-221)||(16653191-16653237)
chr4 (175-221)||(30527587-30527633)
chr4 (176-217)||(43014591-43014632)
chr4 (174-218)||(2777221-2777265)
chr4 (174-218)||(22115352-22115396)
chr4 (174-218)||(41983530-41983574)
chr4 (62-109)||(1975481-1975528)
chr4 (175-218)||(5271601-5271644)
chr4 (176-219)||(8532222-8532265)
chr4 (174-217)||(19591081-19591124)
chr4 (175-218)||(21353963-21354006)
chr4 (174-221)||(37352097-37352144)
chr4 (174-221)||(37356996-37357043)
chr4 (174-221)||(51348063-51348110)
chr4 (176-218)||(14828803-14828845)
chr4 (176-213)||(1975398-1975435)
chr4 (176-217)||(3839095-3839136)
chr4 (174-215)||(15521071-15521112)
chr4 (176-217)||(16895950-16895991)
chr4 (174-219)||(28974008-28974053)
chr4 (175-221)||(36741797-36741845)
chr4 (176-217)||(56541766-56541807)
chr4 (174-218)||(23479823-23479867)
chr4 (185-221)||(24549419-24549455)
chr4 (174-218)||(38009207-38009251)
[»] chr1 (29 HSPs)
chr1 (174-221)||(29693384-29693431)
chr1 (174-221)||(4893964-4894011)
chr1 (174-221)||(10763584-10763631)
chr1 (174-221)||(42682588-42682635)
chr1 (175-221)||(29840689-29840735)
chr1 (175-221)||(38896811-38896857)
chr1 (175-221)||(52037390-52037436)
chr1 (174-221)||(1375978-1376025)
chr1 (174-217)||(3929746-3929789)
chr1 (174-221)||(19320419-19320466)
chr1 (174-221)||(22194466-22194513)
chr1 (174-217)||(28565428-28565471)
chr1 (174-221)||(29184476-29184523)
chr1 (174-213)||(48183174-48183213)
chr1 (175-221)||(24289200-24289246)
chr1 (175-221)||(28573156-28573202)
chr1 (175-221)||(33074231-33074277)
chr1 (176-221)||(33363568-33363613)
chr1 (175-216)||(47137860-47137901)
chr1 (174-210)||(28631818-28631854)
chr1 (174-209)||(23909714-23909749)
chr1 (176-219)||(24294867-24294910)
chr1 (175-218)||(44407293-44407336)
chr1 (175-217)||(20767556-20767598)
chr1 (176-218)||(31620598-31620640)
chr1 (175-221)||(46623376-46623422)
chr1 (173-210)||(13662116-13662153)
chr1 (174-206)||(45005717-45005749)
chr1 (175-215)||(50394966-50395006)
[»] chr3 (29 HSPs)
chr3 (59-109)||(44198153-44198203)
chr3 (173-221)||(41053800-41053848)
chr3 (174-221)||(8396762-8396809)
chr3 (174-221)||(22477902-22477949)
chr3 (175-221)||(4137399-4137445)
chr3 (175-221)||(35860998-35861044)
chr3 (175-218)||(18688673-18688716)
chr3 (174-221)||(26776432-26776479)
chr3 (178-221)||(42614239-42614282)
chr3 (174-220)||(5240985-5241031)
chr3 (175-221)||(11950990-11951036)
chr3 (175-221)||(26100777-26100823)
chr3 (176-217)||(188736-188777)
chr3 (174-219)||(50742294-50742339)
chr3 (182-222)||(12001433-12001473)
chr3 (175-210)||(21165930-21165965)
chr3 (176-210)||(22522278-22522312)
chr3 (175-209)||(22759056-22759090)
chr3 (175-221)||(24560111-24560157)
chr3 (176-218)||(39576533-39576575)
chr3 (175-221)||(55290396-55290442)
chr3 (173-210)||(16496384-16496421)
chr3 (176-217)||(30766506-30766547)
chr3 (176-221)||(52843181-52843226)
chr3 (173-218)||(52852741-52852786)
chr3 (174-217)||(15315271-15315315)
chr3 (174-210)||(19893178-19893214)
chr3 (175-219)||(52462214-52462258)
chr3 (174-206)||(54934745-54934777)
[»] chr2 (23 HSPs)
chr2 (176-221)||(45003662-45003707)
chr2 (174-217)||(30922096-30922139)
chr2 (174-221)||(42782670-42782717)
chr2 (175-221)||(4289027-4289073)
chr2 (173-217)||(7364780-7364824)
chr2 (174-221)||(15084296-15084343)
chr2 (174-221)||(28609949-28609996)
chr2 (175-221)||(9542629-9542675)
chr2 (176-221)||(9916707-9916752)
chr2 (176-221)||(25123429-25123474)
chr2 (176-213)||(25124044-25124081)
chr2 (173-218)||(26828459-26828504)
chr2 (176-221)||(44800651-44800696)
chr2 (174-218)||(33908191-33908235)
chr2 (174-209)||(1691425-1691460)
chr2 (175-218)||(5253294-5253337)
chr2 (178-221)||(19488272-19488315)
chr2 (176-218)||(11707573-11707615)
chr2 (175-221)||(19484616-19484662)
chr2 (177-219)||(25573918-25573960)
chr2 (174-215)||(6342727-6342768)
chr2 (173-221)||(10874396-10874444)
chr2 (174-206)||(37224026-37224058)
[»] scaffold0069 (1 HSPs)
scaffold0069 (174-221)||(14644-14691)
[»] scaffold0057 (1 HSPs)
scaffold0057 (175-221)||(17400-17446)
[»] scaffold0249 (1 HSPs)
scaffold0249 (173-217)||(24916-24960)
[»] scaffold0051 (2 HSPs)
scaffold0051 (173-221)||(55556-55604)
scaffold0051 (176-210)||(61720-61754)
[»] scaffold0484 (1 HSPs)
scaffold0484 (174-221)||(8174-8221)
[»] scaffold0381 (1 HSPs)
scaffold0381 (174-221)||(11228-11275)
[»] scaffold0103 (2 HSPs)
scaffold0103 (174-217)||(13023-13066)
scaffold0103 (61-109)||(5189-5237)
[»] scaffold0009 (1 HSPs)
scaffold0009 (175-221)||(139571-139617)
[»] scaffold0242 (1 HSPs)
scaffold0242 (174-218)||(2707-2751)
[»] scaffold0088 (1 HSPs)
scaffold0088 (174-210)||(52691-52727)
[»] scaffold0171 (1 HSPs)
scaffold0171 (175-218)||(29638-29681)
[»] scaffold0047 (1 HSPs)
scaffold0047 (176-218)||(25614-25656)
[»] scaffold0027 (1 HSPs)
scaffold0027 (175-217)||(143213-143255)
[»] scaffold0005 (1 HSPs)
scaffold0005 (176-218)||(10864-10906)
[»] scaffold0006 (2 HSPs)
scaffold0006 (173-210)||(151878-151915)
scaffold0006 (174-210)||(64401-64437)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 174 - 389
Target Start/End: Complemental strand, 30344588 - 30344373
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaac 273  Q
    |||||||||||||||  ||||||| |||| |||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||     
T  30344588 aaactagttacaaacatgtgcttcgcacgagttgaattacgtatttttcaaaaaaattagctctaaaggagagatgttcaaattacagatatttgtgaat 30344489  T
Q  274 gaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaaca 373  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30344488 gaaggtcacataatccgaatatttgtgatgcatggtctaagacatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaaca 30344389  T
Q  374 gaaatatagatgttgt 389  Q
    ||||||||||||||||    
T  30344388 gaaatatagatgttgt 30344373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 385
Target Start/End: Original strand, 24848004 - 24848125
Alignment:
Q  264 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 363  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||||||||||  ||  ||| ||||||| ||||||||  ||||||||| | ||||||| |    
T  24848004 atttgagaacgaaggtcgcataatccgaatatttacgatgcatggtctaaggcataacatcaaagataacataacaaccattgtcattacatacataacg 24848103  T
Q  364 tactacaacagaaatatagatg 385  Q
    |||| || || |||||||||||    
T  24848104 tactgcagcacaaatatagatg 24848125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 2680234 - 2680281
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  2680234 aaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 2680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 32574478 - 32574529
Alignment:
Q  61 gaaaggcaacatttactaatttaccaaaatacccctataagggcaaaatggt 112  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  32574478 gaaaggcagcaattactaatttaccaaaatacccctataagggcaaaatggt 32574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 27015385 - 27015431
Alignment:
Q  66 gcaacatttactaatttaccaaaatacccctataagggcaaaatggt 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27015385 gcaacatttactaatttaccaaaatacccccataagggcaaaatggt 27015431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 28940714 - 28940799
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacaga 262  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||         | ||||||||||||||||||||||||||||||    
T  28940714 actagttacaaacccgtgcttcgcacgggttgaattacgtactttt-taaaaaatttgttctaaaggagagatgttcaaattacaga 28940799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 32569575 - 32569621
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32569575 aaactagttacaaacccgtgcttcgcacgggttgaattacgtatttt 32569621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 4631640 - 4631686
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  4631640 aactagttacaaacccgtgcttcgcacgggttgaattacctattttt 4631686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 18375557 - 18375603
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  18375557 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 18375603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 36778522 - 36778476
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  36778522 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 36778476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 41158686 - 41158640
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41158686 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 41158640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 40586443 - 40586488
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  40586443 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 40586488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 8160418 - 8160465
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8160418 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 8763056 - 8763009
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8763056 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 24055884 - 24055837
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  24055884 aaactagttacaaacccgtgcttcgcacaggttgaataacgtattttt 24055837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2961008 - 2961050
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 2961050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 7391364 - 7391318
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||    
T  7391364 aactagttacaaacccgtgcttcgcacgggttgaataacgttttttt 7391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 27272728 - 27272686
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  27272728 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 27272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 1945229 - 1945184
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  1945229 actagttacaaacccgtgctttgcacgggttgaataacgtattttt 1945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 12249910 - 12249946
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  12249910 aaactagttacaaacccgtgcttcgcacgggttgaat 12249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 23626054 - 23626090
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23626054 aaactagttacaaacccgtgcttcgcacgggttgaat 23626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 27273921 - 27273877
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  27273921 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 27273877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 39445297 - 39445261
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39445297 aaactagttacaaacccgtgcttcgcacgggttgaat 39445261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 41908053 - 41908017
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41908053 aaactagttacaaacccgtgcttcgcacgggttgaat 41908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 4638747 - 4638786
Alignment:
Q  70 catttactaatttaccaaaatacccctataagggcaaaat 109  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  4638747 cattttctaatttacctaaatacccctataagggcaaaat 4638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 25361558 - 25361511
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||| ||||| || |||||||    
T  25361558 aaactagttacaaacccgtgcttcacacgggatgaataacatattttt 25361511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 25833996 - 25834043
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||    
T  25833996 aaactagttacaaacccgtgctttgcacggattgaataacgtattttt 25834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 27244398 - 27244437
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  27244398 actagttacaaacccatgcttcgcacgggttgaattacgt 27244437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 41978902 - 41978855
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||| |||| |||||||| |||||||||||| ||||||||||    
T  41978902 aaactagttagaaactcgtgcttcgcacgggttgaataacgtattttt 41978855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 42060658 - 42060701
Alignment:
Q  172 ccaaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||    
T  42060658 ccaaactagttacaaacccgtgcttcgcacgggttcaataacgt 42060701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 29434314 - 29434280
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  29434314 actagttacaaacccgtgcttcacacgggttgaat 29434280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 6300487 - 6300528
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  6300487 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 6300528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 11697151 - 11697110
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  11697151 actagttacaaacccgtgctttgcacgggttgaataacgtat 11697110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 25346037 - 25345992
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||| |||||| ||||| |||||| ||||||||||    
T  25346037 actagttacaaacccatgcttcgcacggattgaataacgtattttt 25345992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 36597310 - 36597355
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||    
T  36597310 aaactagttacaaacccgtgcttcgcacgggttcaatgacatattt 36597355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 37029958 - 37029917
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  37029958 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 37029917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 5836283 - 5836239
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||    
T  5836283 aaactagttacaaacctgtgcttcgcacgggttcaataacgtatt 5836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 22332003 - 22332047
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||    
T  22332003 aaactagttacagacccgtgcttcgcacgggttcaataacgtatt 22332047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 30827079 - 30827035
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||    
T  30827079 aaactagttacaaacccgtgcttcgtacgggttcaataacgtatt 30827035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 173 - 389
Target Start/End: Original strand, 18985189 - 18985404
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaa 272  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||         ||  ||||||||||| ||||||||||||||||||||||||||    
T  18985189 caaactagttacaaacccgtgcttcgcacgggttgaattacatgttttt-taaaaaattaactctaaaggagatatgttcaaattacagatatttgtgaa 18985287  T
Q  273 cgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaac 372  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |    
T  18985288 cgaaggtcacataatccgaatatttgtgatgcatggtctaagacatggcattaaagatagcataacaattattgtcattgcgtacataatgtactccagc 18985387  T
Q  373 agaaatatagatgttgt 389  Q
    |||||||||||||||||    
T  18985388 agaaatatagatgttgt 18985404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 1619790 - 1619841
Alignment:
Q  61 gaaaggcaacatttactaatttaccaaaatacccctataagggcaaaatggt 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1619790 gaaaggcaacaattactaatttaccaaaatacccctataagggcaaaatggt 1619841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 19962516 - 19962466
Alignment:
Q  59 gggaaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19962516 gggaaaggcagcatttactaatttaccaaaatacccctataagggcaaaat 19962466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 11681668 - 11681756
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacaga 262  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||         |   ||||||||||||||||||||||||||||    
T  11681668 aaactagttacaaacccgtgcttcgcacgggttgaattacgtacttttttaaaaaaattactctaaaggagagatgttcaaattacaga 11681756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 24447838 - 24447791
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  24447838 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 24447791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 1363265 - 1363219
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1363265 aactagttacaaacccgtgcttcgcacgggttgaattacatattttt 1363219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 4110102 - 4110057
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 6966235 - 6966279
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  6966235 aaactagttacaaacccgtgcttcgcacgggttgaataacgtatt 6966279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 18389166 - 18389209
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  18389166 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 18389209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 33319092 - 33319049
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  33319092 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 33319049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 35160166 - 35160119
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  35160166 aaactagttacaaatccgtgcttcgcacgggttgaataacgtattttt 35160119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 875573 - 875535
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattac 213  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  875573 aactagttacaaacccgtgcttcgcacgggttgaattac 875535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 15043827 - 15043873
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  15043827 aactagttacaaacccgtgcttcgcacggattgaataacgtattttt 15043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 1615103 - 1615143
Alignment:
Q  180 gttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  1615103 gttacaaacccatgcttcacacgggttgaattacgtatttt 1615143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 2634772 - 2634820
Alignment:
Q  61 gaaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    ||||||||  |||||||||||||||||||||||| | ||||||||||||    
T  2634772 gaaaggcatgatttactaatttaccaaaatacccttctaagggcaaaat 2634820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 1932382 - 1932347
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1932382 aactagttacaaacccgtgcttcgcacgggttgaat 1932347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 2522066 - 2522023
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  2522066 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 2522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 5753125 - 5753168
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||    
T  5753125 aaactagttacaaacccgtacttcgcacgggttgaataacgtat 5753168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2624721 - 2624763
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||| || |||||||||||| ||||||    
T  2624721 aactagttacaaacccgtgcatcgcacgggttgaataacgtat 2624763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 9978707 - 9978753
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||| |||||||| |||||||||||| || |||||||    
T  9978707 aactagttacaaactcgtgcttcgcacgggttgaataacatattttt 9978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 1222426 - 1222381
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| || || |||||| ||||||||||    
T  1222426 actagttacaaacccgtgcttcgcatggattgaataacgtattttt 1222381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 13456734 - 13456774
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  13456734 aactagttacaaacccgtgcttcgcacgggttcaataacgt 13456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 29737676 - 29737644
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||| ||||||||||||    
T  29737676 tagttacaaacccgtgcttcgcacgggttgaat 29737644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 33979226 - 33979182
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    |||||||||||||||||| ||| |||||||| ||| |||||||||    
T  33979226 actagttacaaacccgtgtttcgcacgggtttaataacgtatttt 33979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 35042039 - 35041995
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||||||    
T  35042039 aactagttacaaacccgtgtttcgcacgggttcaataacgtattt 35041995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 2e-74; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 176 - 389
Target Start/End: Complemental strand, 23920325 - 23920113
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaacga 275  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||         ||  ||||||||||| |||||||||||||||||||||||||||||    
T  23920325 actagttacaaacccgtgcttcgcacgggttgaattacatgttttt-taaaaaattaactctaaaggagatatgttcaaattacagatatttgtgaacga 23920227  T
Q  276 aggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaacaga 375  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  23920226 aggtcacataatccgaatatttgtgatgcatggtctaagacatggcattaaagatagcataacaattattgtcattgcgtacataatgtactccagcaga 23920127  T
Q  376 aatatagatgttgt 389  Q
    ||||||||||||||    
T  23920126 aatatagatgttgt 23920113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 385
Target Start/End: Complemental strand, 39952679 - 39952558
Alignment:
Q  264 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 363  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| | |||||||||    
T  39952679 atttgagaacgaaggtcgcataatccgaatatttgtgatgcatggtctaaagcatggcataaaagatagcataacaattattgtcattacatacataatg 39952580  T
Q  364 tactacaacagaaatatagatg 385  Q
    |||| || || |||||||||||    
T  39952579 tactgcagcataaatatagatg 39952558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 13596963 - 13596915
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13596963 caaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 13596915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 1685046 - 1685093
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1685046 aaactagttacaaacccgtgcttcgcacgggttgaattatgtattttt 1685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 34719500 - 34719454
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 34719454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 36884780 - 36884826
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaataacgtattttt 36884826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 3086433 - 3086478
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 3086478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 25695539 - 25695584
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 25695584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 752054 - 752101
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  752054 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 752101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 14387898 - 14387941
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaataacgtattttt 14387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 36366123 - 36366166
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  36366123 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 36366166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 7863528 - 7863570
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  7863528 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 7863570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 20350869 - 20350823
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  20350869 caaactagttacaaacccgtgcttcgcacgggttcaataacgtattt 20350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 22602634 - 22602676
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  22602634 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 22602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 43136273 - 43136319
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  43136273 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 43136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 4883115 - 4883070
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||    
T  4883115 caaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 4883070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 41693183 - 41693138
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  41693183 actagttacaaactcgtgcttcgcacgggttgaataacgtattttt 41693138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 42819330 - 42819371
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaataacgtat 42819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 32977099 - 32977143
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||    
T  32977099 caaactagttacaaaccggtgcttcgcacgggttgaataacgtat 32977143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 34373667 - 34373711
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  34373667 aaactagttacaaacccgtgcttcgcacgggtttaataacgtatt 34373711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 5620643 - 5620678
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaat 5620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 9702751 - 9702716
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9702751 aactagttacaaacccgtgcttcgcacgggttgaat 9702716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 9809820 - 9809855
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaat 9809855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 17997502 - 17997459
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  17997502 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 17997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 19395695 - 19395652
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggttcaataacgtattt 19395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 12702061 - 12702095
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaat 12702095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 38041490 - 38041524
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaa 209  Q
    ||||||||||||||||||||||| |||||||||||    
T  38041490 aactagttacaaacccgtgcttcgcacgggttgaa 38041524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 4802095 - 4802132
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaatta 212  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4802095 aactagttacaaacccgtgcttcgcacgggttgtatta 4802132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 30181458 - 30181407
Alignment:
Q  173 caaactagttacaaacccgtgc---ttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||   ||| |||||||||||| ||||||||||    
T  30181458 caaactagttacaaacccgtgcgaattcgcacgggttgaataacgtattttt 30181407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 38935392 - 38935347
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||    
T  38935392 caaactagttacaaacccgtgcttcgtacgggttcaataacgtatt 38935347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 10511663 - 10511707
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||    
T  10511663 aaactagttacaaactcgtgcttcacacgggttcaataacgtatt 10511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 33931157 - 33931125
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggtt 206  Q
    |||||||||||||||||||||||| ||||||||    
T  33931157 aaactagttacaaacccgtgcttcgcacgggtt 33931125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 12844 - 12726
Alignment:
Q  270 gaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactac 369  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||||| | ||||||||||||| |    
T  12844 gaacgaaggtcgcataatccgaatatttgtgatgcatgatctaaggcatggcataaaagataacataacaatcattgtcattacatacataatgtactgc 12745  T
Q  370 aacagaaatatagatgttg 388  Q
    | ||||||| |||||||||    
T  12744 agcagaaatgtagatgttg 12726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 12995 - 12951
Alignment:
Q  177 ctagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||    
T  12995 ctagttacaaacctgtgcttcgcacgggttgaattacgtaatttt 12951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 385
Target Start/End: Original strand, 25350593 - 25350714
Alignment:
Q  264 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 363  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||| ||||| ||| | || ||||||    
T  25350593 atttgagaacgaaggacgcataatccgaatatttgtgatgcatggtctaaggcatgacataaaaaataacataacaatcattgttattacatagataatg 25350692  T
Q  364 tactacaacagaaatatagatg 385  Q
    ||||||| || |||||||||||    
T  25350693 tactacagcataaatatagatg 25350714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 385
Target Start/End: Original strand, 25356287 - 25356408
Alignment:
Q  264 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 363  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||| ||||| ||| | || ||||||    
T  25356287 atttgagaacgaaggacgcataatccgaatatttgtgatgcatggtctaaggcatgacataaaaaataacataacaatcattgttattacatagataatg 25356386  T
Q  364 tactacaacagaaatatagatg 385  Q
    ||||||| || |||||||||||    
T  25356387 tactacagcataaatatagatg 25356408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 691334 - 691285
Alignment:
Q  172 ccaaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  691334 ccaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 21669229 - 21669277
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  21669229 caaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 21669277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 39278281 - 39278234
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  39278281 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39278234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 31896813 - 31896859
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  31896813 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 31896859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 39647981 - 39648027
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  39647981 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39648027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 9151458 - 9151415
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaataacgtattttt 9151415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 12960649 - 12960607
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  12960649 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 12960607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 17817762 - 17817716
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  17817762 aaactagttacaaacccgtgcttcgcacgggttgaataacgtgtttt 17817716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 24682277 - 24682323
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  24682277 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 24682323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 27732952 - 27732998
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  27732952 aactagttacaaacccgtgcttcgcactggttgaataacgtattttt 27732998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 4850494 - 4850449
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| || |||||||    
T  4850494 actagttacaaacccgtgcttcacacgggttgaataacatattttt 4850449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 17172935 - 17172890
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  17172935 actagttacaaacccgtgcttcgcacggattgaataacgtattttt 17172890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 44806619 - 44806574
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||    
T  44806619 actagttacaaatccgtgcttcgcactggttgaattacgtattttt 44806574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 272588 - 272628
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattac 213  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  272588 caaactagttacaaatccgtgcttcgcacgggttgaattac 272628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 9226019 - 9226055
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9226019 aaactagttacaaacccgtgcttcgcacgggttgaat 9226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 49023357 - 49023321
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaa 209  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49023357 caaactagttacaaacccgtgcttcgcacgggttgaa 49023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 25731169 - 25731126
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||    
T  25731169 tagttacaaactcgtgcttcgcacgggttaaattacgtattttt 25731126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 38434277 - 38434312
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggttgaat 38434312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 7854965 - 7855011
Alignment:
Q  176 actagttacaaacccgtg-cttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||    
T  7854965 actagttacaaacccgtggcttcgcacgggttgaataacgtattttt 7855011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 15595466 - 15595432
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaat 15595432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 23476587 - 23476621
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  23476587 actagttacaaacccgtgcttcacacgggttgaat 23476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 27840556 - 27840514
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  27840556 aactagttacaaacccgtgctttgcacgggttgaataacgtat 27840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 29469260 - 29469214
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  29469260 aactagttataaacccgtgctttgcacgggttgaataacgtattttt 29469214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 19049240 - 19049285
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    |||||||||||||||||| |||| |||||||||||| |||| ||||    
T  19049240 aactagttacaaacccgtacttcgcacgggttgaataacgtgtttt 19049285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 47573331 - 47573372
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  47573331 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 47573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 11834955 - 11834991
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  11834955 aaactagttccaaacccgtgcttcgcacgggttgaat 11834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 12807814 - 12807766
Alignment:
Q  61 gaaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    ||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  12807814 gaaaggcatgatttactaatttaccaaaataccctcctaagggcaaaat 12807766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 21597942 - 21597978
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  21597942 aaactagttccaaacccgtgcttcgcacgggttgaat 21597978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 42996984 - 42996948
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  42996984 aaactagttacaaacccgtgcttcgcacaggttgaat 42996948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 48527407 - 48527457
Alignment:
Q  174 aaactagttacaaacccgtgc---ttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||   ||| |||||||||||| ||||||||||    
T  48527407 aaactagttacaaacccgtgcgaattcgcacgggttgaataacgtattttt 48527457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 35534464 - 35534411
Alignment:
Q  59 gggaaaggcaacatttactaatttaccaaaatacccctataagggcaaaatggt 112  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  35534464 gggaaatgcaacatttactaatttaccaaaatacccctataaaggcaaaatggt 35534411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 5483075 - 5483030
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  5483075 actagttacaaacccgtgcttcgcacgggttgaattacgtattttt 5483030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 35707656 - 35707703
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35707656 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 35707703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 2118233 - 2118187
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  2118233 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 2118187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 574177 - 574222
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 574222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 3759321 - 3759276
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 3759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 12680630 - 12680675
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 12680675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 39713496 - 39713541
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39713541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 5759384 - 5759341
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  5759384 aactagttacaaacccgtgcttcgcacgggttgaataacgtatt 5759341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 9887269 - 9887316
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  9887269 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 9887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 27892642 - 27892681
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattac 213  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27892642 aaactagttacaaacccgtgcttcgcacgggttgaattac 27892681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 29713867 - 29713820
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  29713867 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 29713820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 39404590 - 39404637
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  39404590 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 39404637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 8964876 - 8964830
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8964876 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8964830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 15650485 - 15650527
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 15650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 16653237 - 16653191
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  16653237 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 16653191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 30527587 - 30527633
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  30527587 aactagttacaaacccgtgcttcgtacgggttgaataacgtattttt 30527633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 43014591 - 43014632
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  43014591 actagttacaaacccgtgcttcgcacgggttgaataacgtat 43014632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 2777265 - 2777221
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  2777265 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 2777221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 22115352 - 22115396
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||||||||| || ||| |||||||    
T  22115352 aaactagttacaaacccgtgcttcccacggattcaataacgtatt 22115396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 41983530 - 41983574
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  41983530 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 41983574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 1975481 - 1975528
Alignment:
Q  62 aaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    ||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  1975481 aaaggcagcaattactaatttaccaaaataaccccataagggcaaaat 1975528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 5271601 - 5271644
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  5271601 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 5271644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 8532265 - 8532222
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||    
T  8532265 actagttacaaatccgtgcttcgcacgggttgaataacgtattt 8532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 19591124 - 19591081
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||    
T  19591124 aaactagttacaaacccgtgcttcgcacgggtttaataacgtat 19591081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 21354006 - 21353963
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  21354006 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 21353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 37352144 - 37352097
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  37352144 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttt 37352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 37357043 - 37356996
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  37357043 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttt 37356996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 51348110 - 51348063
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||    
T  51348110 aaactagttacaaacccgtgtttcgcacgggttgaataatgtattttt 51348063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 14828803 - 14828845
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 14828845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 1975435 - 1975398
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattac 213  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  1975435 actagttacaaacccatgcttcgcacgggttgaattac 1975398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 3839095 - 3839136
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||| || ||||||||| ||||||    
T  3839095 actagttacaaacccgtgcttcgcaagggttgaataacgtat 3839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 15521112 - 15521071
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  15521112 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 15521071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 16895991 - 16895950
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||| |||||| |||||||||||| ||||||    
T  16895991 actagttacaaacccatgcttcgcacgggttgaataacgtat 16895950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 28974053 - 28974008
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||    
T  28974053 aaactagttacaaacccgtgcttcgcacgggttcaataacatattt 28974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 36741797 - 36741845
Alignment:
Q  175 aactagttacaaacccgtgct--tcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||   || |||||||||||||||||||||||    
T  36741797 aactagttacaaacccgtgcgactcgcacgggttgaattacgtattttt 36741845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 56541807 - 56541766
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  56541807 actagttacaaacctgtgcttcgcacgggttgaataacgtat 56541766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 23479867 - 23479823
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||    
T  23479867 aaactagttacaaacccgtgcttcgcacgagttcaataacgtatt 23479823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 24549455 - 24549419
Alignment:
Q  185 aaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  24549455 aaacccgtgcttcgcacgggttgaataacgtattttt 24549419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 38009251 - 38009207
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||    
T  38009251 aaactagttacaaacacgtgcttcacacgggttcaataacgtatt 38009207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 29693431 - 29693384
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  29693431 aaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 29693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 4894011 - 4893964
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4894011 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4893964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 10763631 - 10763584
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10763631 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 10763584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 42682635 - 42682588
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42682635 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 42682588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 29840689 - 29840735
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 29840735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 38896857 - 38896811
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 38896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 52037390 - 52037436
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  52037390 aactagttacaaacccgtgcttcgcacgggttgaattatgtattttt 52037436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 1376025 - 1375978
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  1376025 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 1375978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 3929746 - 3929789
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  3929746 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 3929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 19320419 - 19320466
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  19320419 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 19320466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 22194466 - 22194513
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  22194466 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 22194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 28565428 - 28565471
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  28565428 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 28565471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 29184476 - 29184523
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  29184476 aaactagttacaaacccgtgcttcgcacggattgaataacgtattttt 29184523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 48183174 - 48183213
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattac 213  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  48183174 aaactagttacaaacccgtgcttcgcacgggttgaattac 48183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 24289200 - 24289246
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 24289246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 28573202 - 28573156
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  28573202 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 28573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 33074231 - 33074277
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  33074231 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 33074277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 33363613 - 33363568
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  33363613 actagttacaaacccgtgcttcgcacggattgaataacgtattttt 33363568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 47137901 - 47137860
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgta 216  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  47137901 aactagttacaaacccgtgcttcgcacgggttgaataacgta 47137860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 28631854 - 28631818
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28631854 aaactagttacaaacccgtgcttcgcacgggttgaat 28631818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 23909714 - 23909749
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaa 209  Q
    |||||||||||||||||||||||| |||||||||||    
T  23909714 aaactagttacaaacccgtgcttcgcacgggttgaa 23909749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 24294910 - 24294867
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  24294910 actagttacaaacccgtgcttcgcacgggttcaataacgtattt 24294867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 44407336 - 44407293
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  44407336 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 44407293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 20767598 - 20767556
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||    
T  20767598 aactagttacaaacccgtgcttcgcacggcttgaataacgtat 20767556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 31620640 - 31620598
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 31620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 46623376 - 46623422
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||| |||||||||| |||| ||||||| ||||||||||    
T  46623376 aactagttacaatcccgtgcttcgcacgagttgaataacgtattttt 46623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 13662116 - 13662153
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  13662116 caaattagttacaaacccgtgcttcgcacgggttgaat 13662153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 45005749 - 45005717
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggtt 206  Q
    |||||||||||||||||||||||| ||||||||    
T  45005749 aaactagttacaaacccgtgcttcgcacgggtt 45005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 50394966 - 50395006
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  50394966 aactagttacaaacccgtgcttcgcacgggttcaataacgt 50395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 44198153 - 44198203
Alignment:
Q  59 gggaaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  44198153 gggaaaggcagcatttactaatttaccaaaatacctctataagggcaaaat 44198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 41053848 - 41053800
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  41053848 caaactagttacaaacccgtgcttcgcacgggttgaattacatattttt 41053800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 8396809 - 8396762
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  8396809 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 8396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 22477949 - 22477902
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  22477949 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 22477902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 4137399 - 4137445
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4137445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 35861044 - 35860998
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 35860998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 18688716 - 18688673
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  18688716 aactagttacaaacccgtgcttcgcacgggttgaataacgtatt 18688673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 26776432 - 26776479
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  26776432 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 26776479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 42614239 - 42614282
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  42614239 tagttacaaacccgtgcttcgcacgggttgaattacatattttt 42614282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 5241031 - 5240985
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 220  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  5241031 aaactagttacaaacccgtgcttcgcacgggttgaataacgtgtttt 5240985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 11950990 - 11951036
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||    
T  11950990 aactagttacaaacccatgcttcgcacgggttgaataacgtattttt 11951036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 26100777 - 26100823
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||    
T  26100777 aactagttacaaacccgtgcttcgcacgggttgaataatgtattttt 26100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 188777 - 188736
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  188777 actagttacaaacccgtgcttcgcacgggttgaataacgtat 188736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 50742339 - 50742294
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||    
T  50742339 aaactagttacaaacccgtgcttcgcacgggttcaataacgtattt 50742294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 12001433 - 12001473
Alignment:
Q  182 tacaaacccgtgcttcccacgggttgaattacgtatttttc 222  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  12001433 tacaaacccgtgcttcgcacgggttgaataacgtatttttc 12001473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 21165930 - 21165965
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaat 21165965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 22522312 - 22522278
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaat 22522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 22759056 - 22759090
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaa 209  Q
    ||||||||||||||||||||||| |||||||||||    
T  22759056 aactagttacaaacccgtgcttcgcacgggttgaa 22759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 24560111 - 24560157
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  24560111 aactagttacaaacccgtgttttacacgggttgaataacgtattttt 24560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 39576575 - 39576533
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||| ||||||| |||||||    
T  39576575 actagttacaaacccgtgcttcgcacgagttgaataacgtatt 39576533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 55290396 - 55290442
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||||||    
T  55290396 aactagttacaaacctgtgcttcgtacgggttgaataacgtattttt 55290442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 16496421 - 16496384
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  16496421 caaattagttacaaacccgtgcttcgcacgggttgaat 16496384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 30766547 - 30766506
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  30766547 actagttacaaacctgtgcttcgcacgggttgaataacgtat 30766506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 52843226 - 52843181
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||| ||||||| | ||||||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaataatgtattttt 52843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 52852741 - 52852786
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||| |||||||| |||||||| ||| |||||||    
T  52852741 caaactagttacaaactcgtgcttcgcacgggttcaataacgtatt 52852786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 15315271 - 15315315
Alignment:
Q  174 aaactagttacaaacccgtgc-ttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  15315271 aaactagttacaaacccgtgctttcgcacgggttgaataacgtat 15315315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 19893178 - 19893214
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  19893178 aaactagttacaaacccgtgcttcatacgggttgaat 19893214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 52462214 - 52462258
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    ||||||||||||| ||||||||| |||||||| ||| ||||||||    
T  52462214 aactagttacaaatccgtgcttcgcacgggttcaataacgtattt 52462258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 54934777 - 54934745
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggtt 206  Q
    |||||||||||||||||||||||| ||||||||    
T  54934777 aaactagttacaaacccgtgcttcgcacgggtt 54934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 45003662 - 45003707
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  45003662 actagttacaaacccgtgcttcgcacgggttgaattacgtattttt 45003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 30922096 - 30922139
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  30922096 aaactagttacaaacccgtgcttcacacgggttgaattacgtat 30922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 42782717 - 42782670
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42782717 aaactagttacaaacccgtgcttcacacgggttgaataacgtattttt 42782670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 4289027 - 4289073
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4289073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 7364824 - 7364780
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  7364824 caaactagttacaaacccgtgcttcgcacgggttgaataacgtat 7364780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 15084296 - 15084343
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  15084296 aaactagttacaaactcgtgcttcgcacgggttgaattacatattttt 15084343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 28609996 - 28609949
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  28609996 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 28609949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 9542629 - 9542675
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||    
T  9542629 aactagttacaaacccgtgcttcgcacgggttgaataacatattttt 9542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 9916707 - 9916752
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaataacgtattttt 9916752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 25123429 - 25123474
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  25123429 actagctacaaacccgtgcttcgcacgggctgaattacgtattttt 25123474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 25124044 - 25124081
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattac 213  Q
    |||||||||||||||||||||| |||||||||||||||    
T  25124044 actagttacaaacccgtgcttcgcacgggttgaattac 25124081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 26828504 - 26828459
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||    
T  26828504 caaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 26828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 44800696 - 44800651
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||    
T  44800696 actagttacaaactcgtgcttcgcacgagttgaattacgtattttt 44800651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 33908235 - 33908191
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  33908235 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 33908191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 1691425 - 1691460
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaa 209  Q
    |||||||||||||||||||||||| |||||||||||    
T  1691425 aaactagttacaaacccgtgcttcgcacgggttgaa 1691460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 5253337 - 5253294
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 5253294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 19488315 - 19488272
Alignment:
Q  178 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||    
T  19488315 tagttacaaacccgtgtttcgcacgggttgaataacgtattttt 19488272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 11707615 - 11707573
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 11707573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 19484616 - 19484662
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||    
T  19484616 aactagttgcaaacccgtgcttcgcacgggttgaataacatattttt 19484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 25573918 - 25573960
Alignment:
Q  177 ctagttacaaacccgtgcttcccacgggttgaattacgtattt 219  Q
    ||||||||||||||||||||| |||||||  ||||||||||||    
T  25573918 ctagttacaaacccgtgcttcgcacgggtgaaattacgtattt 25573960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 6342727 - 6342768
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgt 215  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  6342727 aaactagttacaaacccgtgcttcgcacgggtttaataacgt 6342768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 10874396 - 10874444
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||| |||||||||| |||| ||||||| || |||||||    
T  10874396 caaactagttacaatcccgtgcttcgcacgagttgaataacatattttt 10874444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 37224058 - 37224026
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggtt 206  Q
    |||||||||||||||||||||||| ||||||||    
T  37224058 aaactagttacaaacccgtgcttcgcacgggtt 37224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 14691 - 14644
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14691 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 17400 - 17446
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  17400 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 17446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 24916 - 24960
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  24916 caaactagttacaaacccgtgcttcgcacgggttgaataacgtat 24960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 55604 - 55556
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  55604 caaactagttacaaacccgtgcttcgcacgagttgaataacgtattttt 55556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 61754 - 61720
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  61754 actagttacaaacccgtgcttcgcacgggttgaat 61720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 8174 - 8221
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  8174 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 11275 - 11228
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  11275 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 13066 - 13023
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  13066 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 5237 - 5189
Alignment:
Q  61 gaaaggcaacatttactaatttaccaaaatacccctataagggcaaaat 109  Q
    ||||||||  |||||||||||||||||||||||| | ||||||||||||    
T  5237 gaaaggcatgatttactaatttaccaaaatacccttctaagggcaaaat 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 139617 - 139571
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 221  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||    
T  139617 aactagttacaaactcgtgtttcgcacgggttgaattacgtattttt 139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 2707 - 2751
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  2707 aaactagttacaaacccgtgcttcacacgggttcaataacgtatt 2751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 52691 - 52727
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52691 aaactagttacaaacccgtgcttcgcacgggttgaat 52727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 29638 - 29681
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  29638 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 29681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 25614 - 25656
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  25614 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 25656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 143213 - 143255
Alignment:
Q  175 aactagttacaaacccgtgcttcccacgggttgaattacgtat 217  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||    
T  143213 aactagttacaaacccgtgcttcgcacaggttgaataacgtat 143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 10906 - 10864
Alignment:
Q  176 actagttacaaacccgtgcttcccacgggttgaattacgtatt 218  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  10906 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 151878 - 151915
Alignment:
Q  173 caaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  151878 caaattagttacaaacccgtgcttcgcacgggttgaat 151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 64401 - 64437
Alignment:
Q  174 aaactagttacaaacccgtgcttcccacgggttgaat 210  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  64401 aaactagttataaacccgtgcttcgcacgggttgaat 64437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University