View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10836_low_3 (Length: 389)

Name: NF10836_low_3
Description: NF10836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10836_low_3
NF10836_low_3
[»] chr1 (3 HSPs)
chr1 (19-379)||(52082563-52082923)
chr1 (19-371)||(52092759-52093117)
chr1 (39-157)||(19468478-19468596)
[»] chr8 (7 HSPs)
chr8 (38-134)||(27922509-27922605)
chr8 (44-134)||(17636403-17636493)
chr8 (44-134)||(18315275-18315365)
chr8 (38-134)||(32151302-32151398)
chr8 (92-158)||(28246273-28246339)
chr8 (92-132)||(17628018-17628058)
chr8 (92-132)||(21235613-21235653)
[»] chr5 (4 HSPs)
chr5 (42-157)||(41889533-41889648)
chr5 (38-134)||(32267476-32267572)
chr5 (39-129)||(41901542-41901632)
chr5 (38-111)||(20478107-20478180)
[»] chr3 (13 HSPs)
chr3 (38-157)||(51113760-51113879)
chr3 (38-134)||(51120895-51120991)
chr3 (45-130)||(33714861-33714946)
chr3 (38-111)||(13470757-13470830)
chr3 (311-352)||(33708804-33708845)
chr3 (311-378)||(514486-514553)
chr3 (317-352)||(33396785-33396820)
chr3 (317-352)||(37580607-37580642)
chr3 (52-119)||(37580837-37580904)
chr3 (317-351)||(33093715-33093749)
chr3 (45-121)||(33708989-33709065)
chr3 (317-349)||(36810812-36810844)
chr3 (326-378)||(51764201-51764253)
[»] chr4 (15 HSPs)
chr4 (38-132)||(1548428-1548522)
chr4 (38-134)||(8187093-8187189)
chr4 (41-134)||(7307864-7307957)
chr4 (38-134)||(546914-547010)
chr4 (70-147)||(532222-532299)
chr4 (38-134)||(1524488-1524584)
chr4 (80-115)||(1754554-1754589)
chr4 (38-132)||(553480-553574)
chr4 (178-224)||(1754624-1754670)
chr4 (68-134)||(12121459-12121525)
chr4 (317-378)||(547193-547254)
chr4 (68-113)||(640946-640991)
chr4 (38-135)||(3438567-3438663)
chr4 (38-134)||(1513409-1513505)
chr4 (38-134)||(8184032-8184128)
[»] chr6 (14 HSPs)
chr6 (38-134)||(6432162-6432258)
chr6 (36-135)||(6423216-6423315)
chr6 (43-157)||(6585216-6585330)
chr6 (36-111)||(6426510-6426585)
chr6 (39-130)||(14802338-14802429)
chr6 (38-111)||(6394865-6394938)
chr6 (41-134)||(6410010-6410103)
chr6 (41-111)||(10579761-10579831)
chr6 (92-157)||(11936254-11936319)
chr6 (92-157)||(11948234-11948299)
chr6 (38-106)||(6402861-6402929)
chr6 (38-122)||(6594620-6594704)
chr6 (92-132)||(12102321-12102361)
chr6 (38-122)||(14820694-14820778)
[»] chr2 (4 HSPs)
chr2 (52-134)||(32785774-32785856)
chr2 (311-373)||(32785538-32785600)
chr2 (44-102)||(44575529-44575587)
chr2 (38-130)||(45245091-45245183)
[»] chr7 (3 HSPs)
chr7 (317-369)||(10167444-10167496)
chr7 (317-369)||(10169900-10169952)
chr7 (317-369)||(10177425-10177477)


Alignment Details
Target: chr1 (Bit Score: 349; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 19 - 379
Target Start/End: Original strand, 52082563 - 52082923
Alignment:
Q  19 ccaagtccaattgtagtatcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttgga 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52082563 ccaagtccaattgtagtatcccacaacaactctttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttgga 52082662  T
Q  119 aacttgaaagttcattgaaagtagattcagtgttgaacaagatctcatttccaagtgaataattttacaatatcttaaaacttcaacgataccgtcagat 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52082663 aacttgaaagttcattgaaagtagattcagtgttgaacaagatctcatgtccaagtgaataattttacaatatcttaaaacttcaacgataccgtcagat 52082762  T
Q  219 atgcaatagcaatggcaatatctcaggtcaagcacttgcaagtttggaaaaagagaagccaacattttgacgctttcattcttcaacaatggattgcgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52082763 atgcaatagcaatggcaatatctcaggtcaagcacttgcaagtttggaaaaagagaagccaacattttgatgctttcattcttcaacaatggattgcgag 52082862  T
Q  319 ccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaattagagttctt 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52082863 ccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaattagagttctt 52082923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 371
Target Start/End: Original strand, 52092759 - 52093117
Alignment:
Q  19 ccaagtccaattgtagtatcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttgga 118  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  52092759 ccaagtccaattgtagtagcccacaaaaactctttgagatcacatacaatgtgtcatcatcaatttttgtctttgccaagttcaacacctccaatttgga 52092858  T
Q  119 aacttgaaagttcattgaaagtagattcagtgttgaacaagatctcatttccaagtgaataattttacaatatcttaaaacttcaacgataccgtcagat 218  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||  | ||| ||| ||||||||||| |||||||||||||||| ||||| || |||    
T  52092859 aacttgaaagttcattgaaagtagattcaatgttgaccaagatctcaagttcaaatgagtaattttacaacatcttaaaacttcaacaataccttcggat 52092958  T
Q  219 atgcaatagcaatggcaata------tctcaggtcaagcacttgcaagtttggaaaaagagaagccaacattttgacgctttcattcttcaacaatggat 312  Q
    ||||||||||||||||||||      ||||||||||||| | |||| |||||| |||||||||| ||||||||||| ||||||||| ||||||  |||||    
T  52092959 atgcaatagcaatggcaatatctcattctcaggtcaagcccctgcaggtttgggaaaagagaaggcaacattttgatgctttcatttttcaaccgtggat 52093058  T
Q  313 tgcgagccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaatta 371  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  52093059 tgcctgccaaatggagagacttcacttgagggtatacaacaaagtccatcaaacaatta 52093117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 19468596 - 19468478
Alignment:
Q  39 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattgaaa 138  Q
    ||||||||  || ||||||||||||| | ||||||||||||||  ||||| | |||||| |||||||||||||  |||| ||||  |||||||| |  ||    
T  19468596 ccacaacagttctttgagatcacataaagtgtttcatcatcaacctttgtatctgacaacttcaacacctccagcttgggaactacaaagttcactccaa 19468497  T
Q  139 gtagattcagtgttgaaca 157  Q
    ||||||||| | |||||||    
T  19468496 gtagattcactcttgaaca 19468478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 27922509 - 27922605
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| ||||||||| ||| | || |||||||||||  ||||| | |||||||||||||||||||||||||| ||||| ||||||||||    
T  27922509 cccacaacaactctttgagatcatataaagtgcttcatcatcaacatttgtatatgacaagttcaacacctccaatttgggaacttcaaagttcatt 27922605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 17636493 - 17636403
Alignment:
Q  44 acaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||| |||||||||||||||||| |||||| |||| |  ||| | |||||||||||||||||||||||||| ||||| ||||||||||    
T  17636493 acaactctttgagatcacatacaatgcttcatcgtcaactcctgtttgtgacaagttcaacacctccaatttgggaacttcaaagttcatt 17636403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 18315365 - 18315275
Alignment:
Q  44 acaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||| ||||||||||||| | || ||||||||||| |||||| | |||||||||||||||||||| ||||| ||||| ||||||||||    
T  18315365 acaactctttgagatcacatagagtgcttcatcatcaacttttgtatgtgacaagttcaacacctccagtttgggaactttaaagttcatt 18315275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 32151302 - 32151398
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||| ||||||| ||||||||||||| | ||||||||||||||   ||||   ||||||||| ||||||||||  ||||||||||  |||||||||    
T  32151302 cccactacaactctttgagatcacatagagtgtttcatcatcaaaccttgtacatgacaagtttaacacctccagattggaaacttcgaagttcatt 32151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 28246339 - 28246273
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagtagattcagtgttgaacaa 158  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| || | |||| |||||| ||||||||    
T  28246339 tgacaagtccaacacctccagtttgggaacttcaaagttcaatgtatgtagcttcagtcttgaacaa 28246273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 17628058 - 17628018
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttca 132  Q
    |||||||||||||||||||||||| |||| || ||||||||    
T  17628058 tgacaagttcaacacctccaatttagaaagtttaaagttca 17628018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 21235613 - 21235653
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttca 132  Q
    |||||||||||||||||||| ||||| ||||| ||||||||    
T  21235613 tgacaagttcaacacctccagtttgggaacttcaaagttca 21235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 41889648 - 41889533
Alignment:
Q  42 caacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagta 141  Q
    ||||||||| ||||||||  ||| | |||||||||||||| |||||| | ||| |||||||||||||||||||||| ||||| ||||||||||  |||||    
T  41889648 caacaactctttgagatcttataaagtgtttcatcatcaacttttgtatatgataagttcaacacctccaatttgggaactttaaagttcatttcaagta 41889549  T
Q  142 gattcagtgttgaaca 157  Q
    | |||| | |||||||    
T  41889548 gcttcactattgaaca 41889533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 32267476 - 32267572
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| ||||||||| ||| | || ||||||||||| | |||| | |||||||||||| ||||||||||||| ||||| ||||||||||    
T  32267476 cccacaacaactctttgagatcatataaagtgcttcatcatcaactattgtttgtgacaagttcaatacctccaatttgggaacttcaaagttcatt 32267572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 41901632 - 41901542
Alignment:
Q  39 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagt 129  Q
    |||||||||||| ||||||||| ||| | || ||||||||||| |||||| | |||||||||||||||||||| ||||| ||||| |||||    
T  41901632 ccacaacaactctttgagatcatataaagtgcttcatcatcaacttttgtatatgacaagttcaacacctccagtttgggaacttcaaagt 41901542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 20478180 - 20478107
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctcca 111  Q
    |||||||||| |||||||||||||| | |||||||| |||||||  ||||| | ||||||||||||||||||||    
T  20478180 cccacaacaattccttgagatcacagataatgtttcgtcatcaacatttgtatatgacaagttcaacacctcca 20478107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 51113879 - 51113760
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattgaa 137  Q
    ||||||||||||| | ||||||||||| | ||||||||||||||   |||| ||||||||||  |||||||||| ||||| | ||| ||||||||||  |    
T  51113879 cccacaacaactcttcgagatcacatagagtgtttcatcatcaaccattgtatttgacaagtctaacacctccagtttgggagcttcaaagttcattcca 51113780  T
Q  138 agtagattcagtgttgaaca 157  Q
    ||||| |||||| |||||||    
T  51113779 agtagcttcagttttgaaca 51113760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 51120991 - 51120895
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||| ||||||| ||||||| ||||| | | |||||||||||| | |||| |  ||||||||||||||||||||||||  ||||| ||||||||||    
T  51120991 cccacgacaactctttgagattacatatagtttttcatcatcaactcttgtatgcgacaagttcaacacctccaatttgagaacttcaaagttcatt 51120895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 33714946 - 33714861
Alignment:
Q  45 caactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagtt 130  Q
    |||||| |||| ||| |||||||||   ||||||||||| |||  ||||||||||||| |||||||| ||||||||||| ||||||    
T  33714946 caactctttgaaatcgcatacaatgcgccatcatcaattcttgagtttgacaagttcagcacctccagtttggaaacttcaaagtt 33714861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 13470830 - 13470757
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctcca 111  Q
    |||||||||| || ||||||||| ||| | ||||| ||||| ||  ||||| ||||||||||||||||||||||    
T  13470830 cccacaacaattctttgagatcatatagagtgttttatcattaacctttgtatttgacaagttcaacacctcca 13470757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 33708845 - 33708804
Alignment:
Q  311 attgcgagccaaatggagagacttcacttgagggtatacaac 352  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  33708845 attgtgagccaaatggagagacttcacttgatggtatacaac 33708804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 514553 - 514486
Alignment:
Q  311 attgcgagccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaattagagttct 378  Q
    |||| ||||||||| |||||| || | ||||||||  ||||||||||||| ||||||||| |||||||    
T  514553 attgtgagccaaatagagagattttaattgagggttcacaacaaagtccaacaaagaattggagttct 514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 33396785 - 33396820
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaac 352  Q
    ||||||||||||||||||||||||| ||||||||||    
T  33396785 agccaaatggagagacttcacttgatggtatacaac 33396820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 37580642 - 37580607
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaac 352  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37580642 agccaaatggagagacttcacttgatggtatacaac 37580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 37580904 - 37580837
Alignment:
Q  52 ttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaa 119  Q
    |||||||||||||||||  || |||||||||| |||  |||||||||||||| ||||| | |||||||    
T  37580904 ttgagatcacatacaatactttatcatcaattcttgagtttgacaagttcaatacctcgagtttggaa 37580837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 33093749 - 33093715
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaa 351  Q
    ||||||||||||||||||||||||| |||||||||    
T  33093749 agccaaatggagagacttcacttgacggtatacaa 33093715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 33709065 - 33708989
Alignment:
Q  45 caactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaac 121  Q
    |||||| |||||||  |||||||||   ||||||||||| |||  | ||||||||||| |||||||| |||||||||    
T  33709065 caactctttgagattgcatacaatgcaccatcatcaattcttgagtctgacaagttcagcacctccagtttggaaac 33708989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 349
Target Start/End: Complemental strand, 36810844 - 36810812
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatac 349  Q
    ||||||||||||||||||||||||| |||||||    
T  36810844 agccaaatggagagacttcacttgatggtatac 36810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 51764253 - 51764201
Alignment:
Q  326 gagagacttcacttgagggtatacaacaaagtccagcaaagaattagagttct 378  Q
    ||||||||| | ||||||||||||| ||||||||| |||||||| ||| ||||    
T  51764253 gagagactttaattgagggtatacaccaaagtccaccaaagaatcagaattct 51764201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 1548522 - 1548428
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttca 132  Q
    ||||||||||||| ||||||||||||  | |||||||||||||||  |||| | |||||||||||||||||||| ||||| || || ||||||||    
T  1548522 cccacaacaactctttgagatcacattgagtgtttcatcatcaatacttgtatgtgacaagttcaacacctccagtttgggaatttcaaagttca 1548428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 8187189 - 8187093
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| |||| ||  |||| | ||||| |||||||| | |||| | |||||||||||||||||||| |||||||| || ||||||||||    
T  8187189 cccacaacaactctttgaaattgcataaagtgttttatcatcaactcttgtatgtgacaagttcaacacctccagtttggaaatttcaaagttcatt 8187093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 7307864 - 7307957
Alignment:
Q  41 acaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    |||||||||| ||||||||| |   | || ||||||||||| || ||| | |||||||||||| ||||||||||||| ||||| ||||||||||    
T  7307864 acaacaactctttgagatcatacgtagtgcttcatcatcaacttctgtatatgacaagttcaatacctccaatttgggaactttaaagttcatt 7307957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 546914 - 547010
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| ||||||||||||| | |||||||||||  |   ||||   ||||||||||| |||||||||||| | ||||| ||||||||||    
T  546914 cccacaacaactctttgagatcacatagagtgtttcatcattgacaattgtacgtgacaagttcaccacctccaatttaggaacttcaaagttcatt 547010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 532222 - 532299
Alignment:
Q  70 tttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagtagattca 147  Q
    ||||||||||||| ||||| | |||||||||||||||||| |  ||||  |||| ||||||||||  |||||||||||    
T  532222 tttcatcatcaatgtttgtatatgacaagttcaacacctctagcttggggacttcaaagttcattccaagtagattca 532299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 1524584 - 1524488
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||| |||||||  |||||||| ||| | ||||||||||||||   ||||   |||||| |||||||||||||| |||| ||||| ||||||||||    
T  1524584 cccacgacaactctgtgagatcatatagagtgtttcatcatcaacacttgtacgtgacaaattcaacacctccaaattgggaacttcaaagttcatt 1524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 1754554 - 1754589
Alignment:
Q  80 aatttttgtctttgacaagttcaacacctccaattt 115  Q
    |||||||||||| |||||||||||||||||||||||    
T  1754554 aatttttgtcttcgacaagttcaacacctccaattt 1754589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 553480 - 553574
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttca 132  Q
    |||| |||||||| |||| |||||||  | || ||||||||||| | ||||   |||||||||||||||||||| ||||  ||||| ||||||||    
T  553480 cccagaacaactctttgaaatcacattaagtgcttcatcatcaactcttgtaaatgacaagttcaacacctccagtttgagaactttaaagttca 553574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 1754624 - 1754670
Alignment:
Q  178 taattttacaatatcttaaaacttcaacgataccgtcagatatgcaa 224  Q
    |||||||| || |||||||||||||||||||||| | ||||||||||    
T  1754624 taattttagaacatcttaaaacttcaacgatacctttagatatgcaa 1754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 12121525 - 12121459
Alignment:
Q  68 tgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||||  ||||| | ||||||||||||||| || | ||||| ||||| ||||||||||    
T  12121525 tgtttcatcatcaacatttgtatatgacaagttcaacacttctagtttgggaacttcaaagttcatt 12121459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 547193 - 547254
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaattagagttct 378  Q
    |||||||||||||||||||| |||||||  ||||||||| |||   ||||||||||| ||||    
T  547193 agccaaatggagagacttcaattgagggcttacaacaaaatccttgaaagaattagaattct 547254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 640946 - 640991
Alignment:
Q  68 tgtttcatcatcaatttttgtctttgacaagttcaacacctccaat 113  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||    
T  640946 tgtttcatcatcaacgtttgtatctgacaagttcaacacctccaat 640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 3438663 - 3438567
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattg 135  Q
    ||||||||||||| ||||||| ||||  | | ||| |||||||| | |||| | ||||||| |||| ||||||||||| ||||| | |||||||||||    
T  3438663 cccacaacaactctttgagattacatggagtattt-atcatcaactcttgtatgtgacaagctcaatacctccaattttgaaacatcaaagttcattg 3438567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 1513505 - 1513409
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||| ||||| | ||||||| || || | ||||||||||||||  |||||   ||||||||||||||| || | ||||| ||||| ||||||||||    
T  1513505 cccacgacaacactttgagattacgtagagtgtttcatcatcaacatttgtaaatgacaagttcaacacttctagtttgggaacttcaaagttcatt 1513409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 8184128 - 8184032
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| |||||||  |||| | || |  |||||||| | |||| | |||||||||||||||||| | ||| | ||||| ||||||||||    
T  8184128 cccacaacaactctttgagattgcatagagtgctatatcatcaactcttgtatgtgacaagttcaacacctctagtttcggaacttcaaagttcatt 8184032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 6432162 - 6432258
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    |||||||||| || || |||||||||| | ||||||||||||||   |||| ||||||||||||||||||| ||  |||| ||||| ||||||||||    
T  6432162 cccacaacaattctttaagatcacataaagtgtttcatcatcaacgcttgtatttgacaagttcaacaccttcagcttgggaacttcaaagttcatt 6432258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 6423216 - 6423315
Alignment:
Q  36 atcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattg 135  Q
    ||||||||||||||| |||||||| |||| | ||||| |||   || | |||| ||||||||||||||||||||||  |||| ||||| |||||||||||    
T  6423216 atcccacaacaactctttgagatcgcatagagtgttttatcgctaactcttgtatttgacaagttcaacacctccagcttgggaacttaaaagttcattg 6423315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 6585330 - 6585216
Alignment:
Q  43 aacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagtag 142  Q
    |||||||| ||||||||||||| | ||||||||||||||  ||||| | |||||||||||| |||||||| | || ||||  |||||| |||  ||||||    
T  6585330 aacaactctttgagatcacatagagtgtttcatcatcaacctttgtatctgacaagttcaatacctccaactgggtaactaaaaagtttattccaagtag 6585231  T
Q  143 attcagtgttgaaca 157  Q
     |||| | |||||||    
T  6585230 cttcactcttgaaca 6585216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 6426510 - 6426585
Alignment:
Q  36 atcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctcca 111  Q
    |||| ||||||| || |||||||| |||| || ||||||||||||||  |||| |||||||| |||||||||||||    
T  6426510 atccgacaacaattctttgagatcgcataaaaagtttcatcatcaatgcttgtgtttgacaaattcaacacctcca 6426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 14802338 - 14802429
Alignment:
Q  39 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagtt 130  Q
    ||||||||| || |||| |||||||| | ||||||||||||||  ||||| |||||||| |||||||| ||||  |||| ||||| ||||||    
T  14802338 ccacaacaattctttgaaatcacatagagtgtttcatcatcaacctttgtatttgacaaattcaacacttccatcttgggaacttcaaagtt 14802429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 6394865 - 6394938
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctcca 111  Q
    |||||||||| || ||||||||||| | |  |||||||||||||   |||| ||||||||||||||||||||||    
T  6394865 cccacaacaattctttgagatcacagaaagagtttcatcatcaacgcttgtatttgacaagttcaacacctcca 6394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 6410010 - 6410103
Alignment:
Q  41 acaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||| || ||||||||||||| |  |||||||||||||   |||| |||||| |||||||||||| ||  |||| ||||| ||||||||||    
T  6410010 acaacaattctttgagatcacataaagagtttcatcatcaacgcttgtatttgactagttcaacaccttcagcttgggaacttcaaagttcatt 6410103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 10579831 - 10579761
Alignment:
Q  41 acaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctcca 111  Q
    ||||||| || ||||||||  ||| | ||||| |||||||| |||||| | ||||||||||||||||||||    
T  10579831 acaacaattctttgagatcgaatagagtgttttatcatcaacttttgtatatgacaagttcaacacctcca 10579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 11936319 - 11936254
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagtagattcagtgttgaaca 157  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| || | |||| |||||| |||||||    
T  11936319 tgacaagtccaacacctccagtttgggaacttcaaagttcaatgtacgtagcttcagtcttgaaca 11936254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 11948299 - 11948234
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttcattgaaagtagattcagtgttgaaca 157  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| || | |||| |||||| |||||||    
T  11948299 tgacaagtccaacacctccagtttgggaacttcaaagttcaatgtacgtagcttcagtcttgaaca 11948234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 6402861 - 6402929
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacac 106  Q
    ||||| |||| || ||||||||||||| | ||||||||||||||  || || | |||||||||||||||    
T  6402861 cccactacaattctttgagatcacatagagtgtttcatcatcaaccttcgtatctgacaagttcaacac 6402929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 6594704 - 6594620
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaact 122  Q
    |||||||||| || |||||||||||   | ||| ||||||||||  | ||| |||||||||| ||||||||||| ||||| ||||    
T  6594704 cccacaacaattctttgagatcacacgtagtgtctcatcatcaacctctgtatttgacaagtacaacacctccagtttgggaact 6594620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 12102321 - 12102361
Alignment:
Q  92 tgacaagttcaacacctccaatttggaaacttgaaagttca 132  Q
    |||||||||||||||||||| ||||| ||||| ||||||||    
T  12102321 tgacaagttcaacacctccagtttgggaacttcaaagttca 12102361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 14820694 - 14820778
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaact 122  Q
    |||||||||| || | ||||||| ||| | |||||||| |||||  ||||| ||||| |||||||||||||| || |||| ||||    
T  14820694 cccacaacaattcttggagatcatataaagtgtttcattatcaacctttgtatttgataagttcaacacctctaacttgggaact 14820778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 32785856 - 32785774
Alignment:
Q  52 ttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagttcatt 134  Q
    ||||||||||||| | || ||||||||||||| |||| | |||||||||||||||||| | ||||| | ||| ||||||||||    
T  32785856 ttgagatcacataaagtgcttcatcatcaattcttgtatgtgacaagttcaacacctctagtttgggagctttaaagttcatt 32785774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 32785600 - 32785538
Alignment:
Q  311 attgcgagccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaattaga 373  Q
    ||||||||||||||||||| |||| | |||||||  ||||||||| |||| ||||||||||||    
T  32785600 attgcgagccaaatggagaaactttaattgagggattacaacaaaatccatcaaagaattaga 32785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 44575587 - 44575529
Alignment:
Q  44 acaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttca 102  Q
    ||||||| ||||||||||||||||||| |||||||||| | |||| |||||||| ||||    
T  44575587 acaactctttgagatcacatacaatgtgtcatcatcaactcttgtttttgacaaattca 44575529  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 45245183 - 45245091
Alignment:
Q  38 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagtt 130  Q
    ||||| ||||||| ||||||||||||  | ||||||||||||||   |||||| |||||| ||||||||||| | ||| | ||||| ||||||    
T  45245183 cccacgacaactctttgagatcacatggagtgtttcatcatcaaccattgtctctgacaaattcaacacctcaagttttggaacttcaaagtt 45245091  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 10167496 - 10167444
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaat 369  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||| |||||||||    
T  10167496 agccaaatagagagacttcaattgagggtatacaccaaaatccggcaaagaat 10167444  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 10169952 - 10169900
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaat 369  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||| |||||||||    
T  10169952 agccaaatagagagacttcaattgagggtatacaccaaaatccggcaaagaat 10169900  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 10177477 - 10177425
Alignment:
Q  317 agccaaatggagagacttcacttgagggtatacaacaaagtccagcaaagaat 369  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||| |||||||||    
T  10177477 agccaaatagagagacttcaattgagggtatacaccaaaatccggcaaagaat 10177425  T

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