View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10837_low_3 (Length: 247)
Name: NF10837_low_3
Description: NF10837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10837_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 38973541 - 38973325
Alignment:
| Q |
18 |
attaattcctttagttgaccaaaaaatattttcctgtttttgcatgcaaccgtgagggggcagttaaataattcaactccgatannnnnnnnagttcttg |
117 |
Q |
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| T |
38973541 |
attaattcctttagttgaccaaaaaatattttcctgtttttgcatgcaaccgtgagggggcagttaaataattcaattccgatattttttttagttcttg |
38973442 |
T |
|
| Q |
118 |
ttgggatgtccatgacaaaatcttgtactataatctgatactgttttcccgtcatttacaatttcatataaattatagttataaattcttccaatcaata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38973441 |
ttgggatgtccatgacaaaatcttgtactataatctgatactgttttcccgtcatttacaatttcatataaattatagttataaattcttccaatcaata |
38973342 |
T |
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| Q |
218 |
ctcccttctttctctct |
234 |
Q |
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||||||||||||||||| |
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| T |
38973341 |
ctcccttctttctctct |
38973325 |
T |
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