View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10838_low_46 (Length: 218)
Name: NF10838_low_46
Description: NF10838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10838_low_46 |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 2274093 - 2273913
Alignment:
| Q |
23 |
gttataaatgaaagggattttacggtccatatatgttaggacgtgataataaaacctttctggtacagaagtcataactaacctgcttgattcttcacca |
122 |
Q |
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| T |
2274093 |
gttataaatgaaagggattttacggtccatatatgttaggacgtgataataaaacctttctggtacagaagtcataactaacctgcttgattcttcacca |
2273994 |
T |
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| Q |
123 |
accataagaaaaagcatccatcaaaaatgtcactctctctatttagtattttctacttattgcagaaaacacagttcctta |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2273993 |
accataagaaaaagcatccatcaaaaatgtcactctctctatttagtattttctacttattgcagaaaacacagtccctta |
2273913 |
T |
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