View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10839_low_18 (Length: 239)

Name: NF10839_low_18
Description: NF10839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10839_low_18
NF10839_low_18
[»] chr3 (28 HSPs)
chr3 (14-172)||(1281084-1281242)
chr3 (172-223)||(44785401-44785452)
chr3 (172-223)||(9111499-9111550)
chr3 (172-223)||(10298053-10298104)
chr3 (172-223)||(17653786-17653837)
chr3 (172-223)||(19557057-19557108)
chr3 (172-223)||(34080035-34080086)
chr3 (172-223)||(37508995-37509046)
chr3 (172-223)||(40691001-40691052)
chr3 (172-223)||(42507360-42507411)
chr3 (172-223)||(48340471-48340522)
chr3 (172-223)||(49823386-49823437)
chr3 (174-223)||(8817393-8817442)
chr3 (174-223)||(22722005-22722054)
chr3 (183-224)||(42170362-42170403)
chr3 (172-223)||(2787837-2787888)
chr3 (172-223)||(4238668-4238719)
chr3 (172-223)||(8437499-8437550)
chr3 (172-223)||(21295331-21295382)
chr3 (172-223)||(38964466-38964517)
chr3 (172-223)||(46208104-46208155)
chr3 (172-223)||(51406747-51406798)
chr3 (172-213)||(6013341-6013382)
chr3 (183-223)||(33942948-33942988)
chr3 (183-223)||(36095696-36095736)
chr3 (172-222)||(9027147-9027197)
chr3 (186-224)||(14848276-14848314)
chr3 (172-224)||(2131745-2131797)
[»] chr8 (28 HSPs)
chr8 (40-172)||(1674196-1674328)
chr8 (50-142)||(20863883-20863975)
chr8 (172-223)||(54617-54668)
chr8 (172-223)||(2890167-2890218)
chr8 (172-223)||(6552729-6552780)
chr8 (172-223)||(7785783-7785834)
chr8 (172-223)||(15888357-15888408)
chr8 (172-223)||(33289266-33289317)
chr8 (172-223)||(39571208-39571259)
chr8 (77-142)||(16686334-16686399)
chr8 (183-223)||(13578931-13578971)
chr8 (172-223)||(3304283-3304334)
chr8 (172-223)||(7012245-7012296)
chr8 (172-223)||(7805704-7805755)
chr8 (172-223)||(12763659-12763710)
chr8 (172-223)||(25601005-25601056)
chr8 (172-223)||(31654687-31654738)
chr8 (172-223)||(32211368-32211419)
chr8 (172-223)||(43199359-43199410)
chr8 (172-223)||(44498192-44498243)
chr8 (173-223)||(12343146-12343196)
chr8 (172-223)||(32114480-32114531)
chr8 (184-226)||(15688047-15688089)
chr8 (172-221)||(28463616-28463665)
chr8 (172-221)||(8587175-8587224)
chr8 (183-224)||(17006927-17006968)
chr8 (183-224)||(17570279-17570320)
chr8 (182-223)||(35564705-35564746)
[»] chr5 (18 HSPs)
chr5 (40-172)||(28000129-28000261)
chr5 (172-223)||(6126898-6126949)
chr5 (172-223)||(9395424-9395475)
chr5 (172-223)||(13103098-13103149)
chr5 (172-223)||(17025698-17025749)
chr5 (172-223)||(23360016-23360067)
chr5 (172-223)||(36563543-36563594)
chr5 (172-223)||(41989412-41989463)
chr5 (183-223)||(11795242-11795282)
chr5 (183-223)||(13033125-13033165)
chr5 (172-223)||(21576020-21576071)
chr5 (172-223)||(37148960-37149011)
chr5 (172-223)||(37642028-37642079)
chr5 (68-139)||(24103002-24103073)
chr5 (187-223)||(583063-583099)
chr5 (183-223)||(4444034-4444074)
chr5 (172-223)||(20848148-20848198)
chr5 (183-223)||(9006898-9006938)
[»] chr6 (48 HSPs)
chr6 (12-144)||(4617020-4617152)
chr6 (18-147)||(4480688-4480817)
chr6 (12-147)||(4516316-4516451)
chr6 (12-148)||(4601783-4601919)
chr6 (18-147)||(4504405-4504534)
chr6 (11-142)||(4560506-4560637)
chr6 (18-147)||(3171736-3171865)
chr6 (51-142)||(4570972-4571063)
chr6 (77-147)||(4505852-4505922)
chr6 (61-142)||(4557125-4557206)
chr6 (83-147)||(4492950-4493014)
chr6 (18-142)||(4592231-4592355)
chr6 (20-147)||(4625946-4626073)
chr6 (20-142)||(4585636-4585758)
chr6 (65-146)||(4299795-4299876)
chr6 (18-142)||(4613726-4613850)
chr6 (172-223)||(2830409-2830460)
chr6 (20-147)||(4461118-4461245)
chr6 (172-223)||(6330189-6330240)
chr6 (172-223)||(8099604-8099655)
chr6 (172-223)||(8382974-8383025)
chr6 (172-223)||(9644770-9644821)
chr6 (172-223)||(9650787-9650838)
chr6 (172-223)||(11572150-11572201)
chr6 (172-223)||(13853598-13853649)
chr6 (172-223)||(26602397-26602448)
chr6 (64-142)||(4563711-4563789)
chr6 (12-142)||(4574308-4574438)
chr6 (77-142)||(4606958-4607023)
chr6 (174-223)||(6143628-6143677)
chr6 (50-142)||(4579432-4579524)
chr6 (183-223)||(8417809-8417849)
chr6 (183-223)||(28747150-28747190)
chr6 (68-139)||(4267224-4267295)
chr6 (12-139)||(4622145-4622272)
chr6 (172-223)||(6068640-6068691)
chr6 (172-223)||(35031006-35031057)
chr6 (18-136)||(4490363-4490481)
chr6 (91-145)||(4515202-4515256)
chr6 (12-138)||(4598175-4598301)
chr6 (174-223)||(33052801-33052850)
chr6 (78-144)||(4392094-4392160)
chr6 (18-139)||(4256620-4256741)
chr6 (183-223)||(17992062-17992102)
chr6 (183-223)||(22896536-22896576)
chr6 (72-123)||(4568072-4568123)
chr6 (183-226)||(8186438-8186481)
chr6 (12-121)||(4260156-4260265)
[»] scaffold0288 (1 HSPs)
scaffold0288 (18-139)||(3727-3848)
[»] scaffold0477 (1 HSPs)
scaffold0477 (12-139)||(4688-4815)
[»] chr7 (20 HSPs)
chr7 (172-223)||(31319404-31319455)
chr7 (176-223)||(1565738-1565785)
chr7 (172-223)||(1738452-1738503)
chr7 (172-223)||(7240823-7240874)
chr7 (172-223)||(7482299-7482350)
chr7 (172-223)||(9268830-9268881)
chr7 (172-223)||(22285773-22285824)
chr7 (172-223)||(38441534-38441585)
chr7 (172-223)||(46840934-46840985)
chr7 (173-223)||(33418450-33418500)
chr7 (183-223)||(94334-94374)
chr7 (183-223)||(36016212-36016252)
chr7 (183-223)||(36583469-36583509)
chr7 (183-223)||(38063929-38063969)
chr7 (172-223)||(4790322-4790373)
chr7 (172-223)||(23314144-23314195)
chr7 (83-136)||(3086426-3086479)
chr7 (172-223)||(28536756-28536807)
chr7 (183-226)||(36033242-36033285)
chr7 (183-223)||(7661150-7661190)
[»] chr4 (28 HSPs)
chr4 (172-223)||(7579384-7579435)
chr4 (172-224)||(51894587-51894639)
chr4 (172-223)||(3422134-3422185)
chr4 (172-223)||(6121898-6121949)
chr4 (172-223)||(47833685-47833736)
chr4 (183-223)||(3993050-3993090)
chr4 (173-221)||(5986952-5987000)
chr4 (172-223)||(3372195-3372246)
chr4 (172-223)||(20538691-20538742)
chr4 (172-223)||(33621870-33621921)
chr4 (172-223)||(41469771-41469822)
chr4 (172-223)||(42797806-42797857)
chr4 (172-223)||(43900623-43900674)
chr4 (172-223)||(46797799-46797850)
chr4 (172-223)||(47838622-47838673)
chr4 (172-223)||(48336337-48336388)
chr4 (172-223)||(53337444-53337495)
chr4 (172-221)||(3904688-3904737)
chr4 (183-223)||(24704444-24704484)
chr4 (183-223)||(52756749-52756789)
chr4 (172-226)||(4780366-4780420)
chr4 (173-221)||(17236864-17236912)
chr4 (183-222)||(17344288-17344327)
chr4 (172-222)||(40913194-40913244)
chr4 (186-223)||(33551275-33551312)
chr4 (172-213)||(46797730-46797771)
chr4 (173-225)||(17344219-17344271)
chr4 (173-221)||(41594660-41594708)
[»] chr1 (23 HSPs)
chr1 (172-223)||(34042770-34042821)
chr1 (172-223)||(9981721-9981772)
chr1 (172-223)||(11796007-11796058)
chr1 (172-223)||(14984911-14984962)
chr1 (172-223)||(25694393-25694444)
chr1 (172-223)||(27159363-27159414)
chr1 (172-223)||(31842800-31842851)
chr1 (172-223)||(39401971-39402022)
chr1 (172-223)||(44668098-44668149)
chr1 (172-223)||(47216704-47216755)
chr1 (172-223)||(47777486-47777537)
chr1 (172-221)||(12483633-12483682)
chr1 (183-223)||(47588353-47588393)
chr1 (172-223)||(1050962-1051013)
chr1 (172-223)||(26471070-26471121)
chr1 (172-222)||(11897129-11897179)
chr1 (173-223)||(44955212-44955262)
chr1 (172-224)||(16448181-16448233)
chr1 (187-223)||(23278021-23278057)
chr1 (172-223)||(17556827-17556878)
chr1 (172-225)||(11897059-11897112)
chr1 (172-223)||(47969769-47969820)
chr1 (183-225)||(21537941-21537983)
[»] chr2 (21 HSPs)
chr2 (172-223)||(3055632-3055683)
chr2 (172-223)||(6648524-6648575)
chr2 (172-223)||(9047760-9047811)
chr2 (172-223)||(12337942-12337993)
chr2 (172-223)||(13197715-13197766)
chr2 (172-223)||(15372300-15372351)
chr2 (172-223)||(15896916-15896967)
chr2 (172-223)||(37990018-37990069)
chr2 (172-223)||(38917527-38917578)
chr2 (172-223)||(41478644-41478695)
chr2 (172-223)||(44398760-44398811)
chr2 (174-223)||(16243790-16243839)
chr2 (183-223)||(44397621-44397661)
chr2 (172-223)||(13344558-13344609)
chr2 (172-223)||(16044322-16044373)
chr2 (172-223)||(30099187-30099238)
chr2 (172-223)||(37666615-37666666)
chr2 (172-223)||(41492901-41492952)
chr2 (172-223)||(44804583-44804634)
chr2 (183-221)||(12170415-12170453)
chr2 (177-223)||(20900674-20900720)
[»] scaffold0009 (1 HSPs)
scaffold0009 (172-221)||(49581-49630)
[»] scaffold1707 (1 HSPs)
scaffold1707 (183-223)||(1409-1449)
[»] scaffold0482 (1 HSPs)
scaffold0482 (172-223)||(12934-12985)
[»] scaffold0464 (1 HSPs)
scaffold0464 (172-223)||(6136-6187)
[»] scaffold0204 (1 HSPs)
scaffold0204 (172-223)||(23859-23910)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 1281242 - 1281084
Alignment:
Q  14 gatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaag 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1281242 gatgaaggaaagaatatgagagaaaaggccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaag 1281143  T
Q  114 tgattaaggaagtgttgcttaaacaaaattagatagaatgatattgttctctgcaatgc 172  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1281142 tgattaaggaaatgttgcttaaacaaaattagatagaatgatattgttttctgcaatgc 1281084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 44785401 - 44785452
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44785401 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatct 44785452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 9111499 - 9111550
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9111550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 10298104 - 10298053
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  10298104 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 10298053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 17653837 - 17653786
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  17653837 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 17653786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 19557057 - 19557108
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  19557057 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 19557108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 34080035 - 34080086
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  34080035 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 34080086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 37509046 - 37508995
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  37509046 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 37508995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 40691001 - 40691052
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  40691001 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 40691052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 42507360 - 42507411
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 42507411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 48340522 - 48340471
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  48340522 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 48340471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 49823386 - 49823437
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  49823386 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 49823437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 8817393 - 8817442
Alignment:
Q  174 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 8817442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 22722054 - 22722005
Alignment:
Q  174 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 22722005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 42170362 - 42170403
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42170362 atttataagagaattttgggtcaacaaaagttgatgtatctg 42170403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 2787837 - 2787888
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  2787837 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatct 2787888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 4238719 - 4238668
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  4238719 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 4238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 8437550 - 8437499
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  8437550 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatct 8437499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 21295331 - 21295382
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  21295331 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatct 21295382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 38964517 - 38964466
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  38964517 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 38964466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 46208155 - 46208104
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  46208155 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatct 46208104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 51406798 - 51406747
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  51406798 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatct 51406747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 6013341 - 6013382
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagt 213  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  6013341 cctccggtcctatttataagagaattttgggtcaacaaaagt 6013382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 33942948 - 33942988
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  33942948 atttataagagaaacttgggtcaacaaaagttgatgtatct 33942988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 36095696 - 36095736
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  36095696 atttacaagagaattttggatcaacaaaagttgatgtatct 36095736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 9027147 - 9027197
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatc 222  Q
    |||||||| | |||||||||| ||  |||||||||||||||||||||||||    
T  9027147 cctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 14848276 - 14848314
Alignment:
Q  186 tataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  14848276 tataagagaaaattgggtcaacaaaagttgatgtatctg 14848314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 2131797 - 2131745
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    |||||||| | | |||| |||||  ||||||||||||||||||||||||||||    
T  2131797 cctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctg 2131745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 1674328 - 1674196
Alignment:
Q  40 ggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 139  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1674328 ggccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaa 1674229  T
Q  140 aattagatagaatgatattgttctctgcaatgc 172  Q
    |||||||||||||||||||||| ||||||||||    
T  1674228 aattagatagaatgatattgttttctgcaatgc 1674196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 20863883 - 20863975
Alignment:
Q  50 ttgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    |||||||||  ||| |||||| |||| ||||| |  ||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  20863883 ttgaagaagaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaaaat 20863975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 54617 - 54668
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  54617 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 54668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 2890167 - 2890218
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  2890167 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 2890218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 6552780 - 6552729
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6552780 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 6552729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 7785783 - 7785834
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7785783 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 7785834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 15888357 - 15888408
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  15888357 cctccagttctatttataagagaattttgggtcaacaaaagttgatgtatct 15888408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 33289266 - 33289317
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  33289266 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 33289317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 39571208 - 39571259
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  39571208 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 39571259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 16686334 - 16686399
Alignment:
Q  77 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    ||||| ||||||||||||||||||||||| || |||||||||| ||| || |||||||||||||||    
T  16686334 agacctggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaat 16686399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 13578971 - 13578931
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13578971 atttataagagaattttgggtcaacaaaagttgatgtatct 13578931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 3304283 - 3304334
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3304283 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatct 3304334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 7012296 - 7012245
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  7012296 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatct 7012245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 7805704 - 7805755
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  7805704 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatct 7805755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 12763659 - 12763710
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  12763659 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatct 12763710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 25601005 - 25601056
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  25601005 cctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatct 25601056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 31654738 - 31654687
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  31654738 cctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatct 31654687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 32211368 - 32211419
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  32211368 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatct 32211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 43199359 - 43199410
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  43199359 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 43199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 44498192 - 44498243
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  44498192 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatct 44498243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 12343146 - 12343196
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 12343196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 32114480 - 32114531
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| |||||||||||||||||| |||||||||||    
T  32114480 cctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatct 32114531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 15688047 - 15688089
Alignment:
Q  184 tttataagagaattttgggtcaacaaaagttgatgtatctgat 226  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  15688047 tttataagagaaagttgggtcaacaaaagttgatgtatctgat 15688089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 28463616 - 28463665
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 8587175 - 8587224
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||| | |||||||||||||  || |||||||||||||||||||||    
T  8587175 cctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtat 8587224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 17006927 - 17006968
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  17006927 atttataagagaaagttgggtcaacaaaagttgatggatctg 17006968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 17570320 - 17570279
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  17570320 atttataagagaaagttgggtcaacaaaagttgatggatctg 17570279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 35564705 - 35564746
Alignment:
Q  182 catttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||||||||| ||||| |||||||||| |||||||||||    
T  35564705 catttataagagatttttgagtcaacaaaatttgatgtatct 35564746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 28000129 - 28000261
Alignment:
Q  40 ggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 139  Q
    ||||||||| ||||||||   ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  28000129 ggccatggagttgaagaaaaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgtttaaacaa 28000228  T
Q  140 aattagatagaatgatattgttctctgcaatgc 172  Q
    |||||||||  ||||||||||| ||||||||||    
T  28000229 aattagatattatgatattgttttctgcaatgc 28000261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 6126949 - 6126898
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6126949 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 6126898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9395475 - 9395424
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9395475 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9395424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 13103149 - 13103098
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13103149 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 13103098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 17025749 - 17025698
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  17025749 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 17025698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 23360067 - 23360016
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  23360067 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 23360016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 36563543 - 36563594
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  36563543 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 36563594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 41989412 - 41989463
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  41989412 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 41989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 11795282 - 11795242
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11795282 atttataagagaattttgggtcaacaaaagttgatgtatct 11795242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 13033165 - 13033125
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13033165 atttataagagaattttgggtcaacaaaagttgatgtatct 13033125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 21576071 - 21576020
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  21576071 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatct 21576020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 37148960 - 37149011
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  37148960 cctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatct 37149011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 37642079 - 37642028
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  37642079 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatct 37642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 24103073 - 24103002
Alignment:
Q  68 gagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 139  Q
    |||||||| ||| | ||||||| ||||||||||||||| |||||||| |||||||| ||  |||||||||||    
T  24103073 gagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 24103002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 583099 - 583063
Alignment:
Q  187 ataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||| ||||||||||||||||||||||||||||||||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatct 583063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 4444074 - 4444034
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  4444074 atttataagagaattttagatcaacaaaagttgatgtatct 4444034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 20848198 - 20848148
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||| |||||||| |||||||||||    
T  20848198 cctccggtcctatttataagagaattttggg-caacaaaaattgatgtatct 20848148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 9006898 - 9006938
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| ||| |||| |||||||||||||||||||||||    
T  9006898 atttataacagacttttaggtcaacaaaagttgatgtatct 9006938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 4617152 - 4617020
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||||||| ||||   ||| ||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  4617152 gagataaaggaaagaaaatgaagcaaaaggccatggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaa 4617053  T
Q  112 agtgattaaggaagtgttgcttaaacaaaatta 144  Q
    ||| |||||||| ||||||||||||||||||||    
T  4617052 agttattaaggatgtgttgcttaaacaaaatta 4617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 4480817 - 4480688
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| ||||   ||| ||||||||| |||||||||  ||| |||||| |||| ||||| ||||||||||||||||||||||| |||||||||||    
T  4480817 aaggaaagaagatgaagcaaaaggccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgat 4480718  T
Q  118 taaggaagtgttgcttaaacaaaattagat 147  Q
    |||||| || ||||||||||||||||||||    
T  4480717 taaggaggtcttgcttaaacaaaattagat 4480688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 4516451 - 4516316
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||||||| |||||  ||| |||||||||||||||||||  ||| |||||| |||| ||||||||||||||||||||  ||||||| || ||    
T  4516451 gagataaaggaaagaagatgaggcaaaaggccatggaattgaagaagaaggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaa 4516352  T
Q  112 agtgattaaggaagtgttgcttaaacaaaattagat 147  Q
    |||||||||||| ||| |||| ||||||||||||||    
T  4516351 agtgattaaggaggtgctgctcaaacaaaattagat 4516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 4601919 - 4601783
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||| ||||| |||||  ||| ||||||||| |||||||||  |||  |||||| |||||||| ||||||||||||||||| |||| | |||||    
T  4601919 gagataaaggcaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaa 4601820  T
Q  112 agtgattaaggaagtgttgcttaaacaaaattagata 148  Q
    ||| |||||||| ||||||||||||||||||||||||    
T  4601819 agttattaaggaggtgttgcttaaacaaaattagata 4601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 4504405 - 4504534
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| ||||||||| |||||||||  ||| |||||| |||| ||||  ||||||||||||||||||||||| |||||||||||    
T  4504405 aaggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcatacatgaacttggacaaagtgat 4504504  T
Q  118 taaggaagtgttgcttaaacaaaattagat 147  Q
    |||||| || ||||||||| || |||||||    
T  4504505 taaggacgtcttgcttaaaaaatattagat 4504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 4560637 - 4560506
Alignment:
Q  11 tgagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgaca 110  Q
    |||||| |||||||||| |||||  ||| |||||||||  |||||||   |||||||| | |||| ||||| || |||||||||||||||||||| || |    
T  4560637 tgagataaaggaaagaagatgaggcaaaaggccatggagctgaagaaaaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggaga 4560538  T
Q  111 aagtgattaaggaagtgttgcttaaacaaaat 142  Q
    ||||||||||||| ||||||||||||||||||    
T  4560537 aagtgattaaggaggtgttgcttaaacaaaat 4560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 3171865 - 3171736
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||||||||||||| |||||||||  ||| |||||| | || |||   ||||||||||||||||||||||| || ||||||||    
T  3171865 aaggaaagaagatgaggcaaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgat 3171766  T
Q  118 taaggaagtgttgcttaaacaaaattagat 147  Q
    |||||| || |||||||||||| |||||||    
T  3171765 taaggaggtcttgcttaaacaatattagat 3171736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 4571063 - 4570972
Alignment:
Q  51 tgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    ||||||||  |||||||||| |||| ||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||||| |||||    
T  4571063 tgaagaagaaggcggaggaggacacgagacctggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaat 4570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 4505922 - 4505852
Alignment:
Q  77 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattagat 147  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  4505922 agacctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaattagat 4505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 4557206 - 4557125
Alignment:
Q  61 ggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    |||||||||| |||| ||||| |||||||||||||||||||| || || |||||||||||||| || |||||||||||||||    
T  4557206 ggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaaaat 4557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 4493014 - 4492950
Alignment:
Q  83 ggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattagat 147  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  4493014 ggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaattagat 4492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4592355 - 4592231
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| ||| || || |||||||||  ||| ||||||||||| ||||| || ||||||||||| |||||||| |||||| ||||    
T  4592355 aaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgat 4592256  T
Q  118 taaggaagtgttgcttaaacaaaat 142  Q
     ||||| |||||||||||| |||||    
T  4592255 caaggaggtgttgcttaaataaaat 4592231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 4626073 - 4625946
Alignment:
Q  20 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 119  Q
    |||||||| |||||  ||| ||||||||| |||||||||  ||| |||||||||| ||| || ||||||||||||||||||||  | || ||| ||||||    
T  4626073 ggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaactgatta 4625974  T
Q  120 aggaagtgttgcttaaacaaaattagat 147  Q
    | || || |||||||||||| |||||||    
T  4625973 atgatgtcttgcttaaacaatattagat 4625946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 4585758 - 4585636
Alignment:
Q  20 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 119  Q
    |||||||| |||||  ||| ||| || || |||||||||  |||||||||| |||| ||||| || |||||||||||||| ||||| || ||||||||||    
T  4585758 ggaaagaagatgaggcaaaaggcaatcgagttgaagaagaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaaagtgatta 4585659  T
Q  120 aggaagtgttgcttaaacaaaat 142  Q
    |||| || ||||||||| |||||    
T  4585658 aggaggttttgcttaaataaaat 4585636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 4299795 - 4299876
Alignment:
Q  65 gaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattaga 146  Q
    |||||||||||||  |||||||||||||| ||||||||||| |||||||| |||||||| ||  ||||||||||| ||||||    
T  4299795 gaggagaacactaatccaggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgcttaaacaatattaga 4299876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 4613726 - 4613850
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| ||| || || |||||||||  ||| |||||| |||| |||||||| ||||||||||| |||||||| |||||||||||    
T  4613726 aaggaaagaaaatgaggcaaaaggcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaagtgat 4613825  T
Q  118 taaggaagtgttgcttaaacaaaat 142  Q
     || || ||| |||| |||||||||    
T  4613826 caatgaggtgctgctgaaacaaaat 4613850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 2830460 - 2830409
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  2830460 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 2830409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 4461245 - 4461118
Alignment:
Q  20 ggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgatta 119  Q
    |||||||| |||||  ||| || ||||||||| ||||||  || ||||||| | || ||||| || |||  |||||||| |||||| |||||||| ||||    
T  4461245 ggaaagaagatgaggcaaaaggtcatggaattcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcatta 4461146  T
Q  120 aggaagtgttgcttaaacaaaattagat 147  Q
    |||| || ||||||||||||||||||||    
T  4461145 aggatgtcttgcttaaacaaaattagat 4461118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 6330240 - 6330189
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6330240 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 6330189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 8099655 - 8099604
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  8099655 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 8099604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 8382974 - 8383025
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  8382974 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 8383025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9644821 - 9644770
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9644821 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9644770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9650838 - 9650787
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9650838 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9650787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 11572150 - 11572201
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11572150 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 11572201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 13853598 - 13853649
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13853598 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 13853649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 26602448 - 26602397
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  26602448 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 26602397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 4563789 - 4563711
Alignment:
Q  64 ggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    |||||| ||||| ||| | || |||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||    
T  4563789 ggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 4563711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 4574438 - 4574308
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||||||| |||||  |||  ||||| ||  ||||||||  || ||||| | |||| ||||| || |||||||||||||  ||||| || ||    
T  4574438 gagataaaggaaagaagatgaggcaaaaagccattgagctgaagaagaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaa 4574339  T
Q  112 agtgattaaggaagtgttgcttaaacaaaat 142  Q
    |||||||||||| ||||||||||||||||||    
T  4574338 agtgattaaggaggtgttgcttaaacaaaat 4574308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 4606958 - 4607023
Alignment:
Q  77 agaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    ||||||||||||| ||||||||||||||| || |||||||||||| | || |||||||||||||||    
T  4606958 agaccaggtggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaat 4607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 6143677 - 6143628
Alignment:
Q  174 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  6143677 tccggttctatttataagagaattttgggacaacaaaagttgatgtatct 6143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 4579524 - 4579432
Alignment:
Q  50 ttgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaat 142  Q
    |||||||||  || ||||||| |||| ||||| || || ||||||||||||||||| || |||||||||||||| ||||| || |||||||||    
T  4579524 ttgaagaagaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaaagtgattaaggaggtgttactcaaacaaaat 4579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 8417809 - 8417849
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8417809 atttataagagaattttgggtcaacaaaagttgatgtatct 8417849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 28747150 - 28747190
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28747150 atttataagagaattttgggtcaacaaaagttgatgtatct 28747190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 4267224 - 4267295
Alignment:
Q  68 gagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaa 139  Q
    |||||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||| ||  |||||||||||    
T  4267224 gagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 4267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 4622272 - 4622145
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||||||| |||||| ||| ||||||||| |||||| ||  ||| || ||||  || || || ||||||||||||||||  ||||| |||||    
T  4622272 gagataaaggaaagaagatgagacaaaaggccatggagttgaaggagaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaa 4622173  T
Q  112 agtgattaaggaagtgttgcttaaacaa 139  Q
    ||| |||||||| ||  |||||||||||    
T  4622172 agttattaaggaggtcatgcttaaacaa 4622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 6068691 - 6068640
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  6068691 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatct 6068640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 35031006 - 35031057
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  35031006 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatct 35031057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 4490363 - 4490481
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| ||| | ||| |||||||||  ||| | |||| |||| ||||  |||||| |||||||||||||||| |||||||||||    
T  4490363 aaggaaagaagatgaggcaaaaggcgacggagttgaagaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgat 4490462  T
Q  118 taaggaagtgttgcttaaa 136  Q
    |||||| ||  ||||||||    
T  4490463 taaggatgtcatgcttaaa 4490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 4515202 - 4515256
Alignment:
Q  91 ttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaattag 145  Q
    ||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  4515202 ttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaattag 4515256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 4598301 - 4598175
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||||||| |||||  ||| | | || || ||||||| |  |||||||||| | || ||||  || |||||||||||||||||||| || ||    
T  4598301 gagataaaggaaagaaaatgaggcaaaagacaattgatttgaagatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaa 4598202  T
Q  112 agtgattaaggaagtgttgcttaaaca 138  Q
    |||||||||||| ||||| ||||||||    
T  4598201 agtgattaaggaggtgtttcttaaaca 4598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 33052801 - 33052850
Alignment:
Q  174 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  33052801 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatct 33052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 4392094 - 4392160
Alignment:
Q  78 gaccaggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaacaaaatta 144  Q
    |||| ||||||| ||||| ||||||||| |||||| |||||||||| || ||||||||||| |||||    
T  4392094 gacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaaacataatta 4392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 4256620 - 4256741
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| || ||||||||||||||||  | | ||| ||||||| || |||| ||||  |||||  |||||||| |||||||| ||    
T  4256620 aaggaaagaagatgaggcaaaaggtcatggaattgaagaagaagacagagaagaacaccagcccagctggtcattcattgatgaacttggacaaagttat 4256719  T
Q  118 taaggaagtgttgcttaaacaa 139  Q
    |||||| ||  |||||||||||    
T  4256720 taaggaggtcatgcttaaacaa 4256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 17992102 - 17992062
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  17992102 atttataagagaattttgggtcaacaaaaatcgatgtatct 17992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 22896576 - 22896536
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  22896576 atttataagagaattttttgtcaacaaaagttgatgtatct 22896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 4568123 - 4568072
Alignment:
Q  72 acactagaccaggtggttgttcatacatgaacttcgacaaagtgattaagga 123  Q
    |||| ||||| |||| || ||||||||||||||| |||||||||||||||||    
T  4568123 acacaagacctggtgattcttcatacatgaacttggacaaagtgattaagga 4568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 8186481 - 8186438
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctgat 226  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  8186481 atttataaaagaaatttggatcaacaaaagttgatgtatctgat 8186438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 4260156 - 4260265
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    |||| ||||||||||| |||||  ||| || |||||| ||||||| |  ||| ||||||||||| || |||  ||||| |||||  |||||||| |||||    
T  4260156 gagaagaaggaaagaagatgaggcaaaaggtcatggagttgaagaggaaggcagaggagaacaccagtccatctggttattcattgatgaacttggacaa 4260255  T
Q  112 agtgattaag 121  Q
    ||| ||||||    
T  4260256 agttattaag 4260265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 3727 - 3848
Alignment:
Q  18 aaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaaagtgat 117  Q
    |||||||||| |||||  ||| |||| |||| || ||||||  ||| |||||||||||||||||||||||| |||||||||||||| | |||||||| ||    
T  3727 aaggaaagaagatgaggcaaaaggccgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaagttat 3826  T
Q  118 taaggaagtgttgcttaaacaa 139  Q
    |||||| || ||||||||||||    
T  3827 taaggaggttttgcttaaacaa 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 4688 - 4815
Alignment:
Q  12 gagatgaaggaaagaatatgagagaaagggccatggaattgaagaaggcggcggaggagaacactagaccaggtggttgttcatacatgaacttcgacaa 111  Q
    ||||| |||||| ||| |||||  ||| ||||||||| |||||||||  ||| ||||||||||| ||  | ||||| ||||||||||||||||| |||||    
T  4688 gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaa 4787  T
Q  112 agtgattaaggaagtgttgcttaaacaa 139  Q
    |||||||||||| ||  |||||||||||    
T  4788 agtgattaaggaggtcatgcttaaacaa 4815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 31319404 - 31319455
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31319404 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatct 31319455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 1565738 - 1565785
Alignment:
Q  176 cggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1565738 cggttctatttataagagaattttgggtcaacaaaagttgatgtatct 1565785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 1738452 - 1738503
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  1738452 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 1738503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 7240874 - 7240823
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7240874 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 7240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 7482350 - 7482299
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7482350 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 7482299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9268881 - 9268830
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9268881 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9268830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 22285824 - 22285773
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22285824 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 22285773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 38441585 - 38441534
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38441585 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 38441534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 46840985 - 46840934
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  46840985 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 46840934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 33418500 - 33418450
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 33418450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 94334 - 94374
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  94334 atttataagagaattttgggtcaacaaaagttgatgtatct 94374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 36016212 - 36016252
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36016212 atttataagagaattttgggtcaacaaaagttgatgtatct 36016252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 36583509 - 36583469
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36583509 atttataagagaattttgggtcaacaaaagttgatgtatct 36583469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 38063929 - 38063969
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38063929 atttataagagaattttgggtcaacaaaagttgatgtatct 38063969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 4790373 - 4790322
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  4790373 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatct 4790322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 23314144 - 23314195
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  23314144 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatct 23314195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 3086479 - 3086426
Alignment:
Q  83 ggtggttgttcatacatgaacttcgacaaagtgattaaggaagtgttgcttaaa 136  Q
    ||||||||||||||||||||||| |||||||| |||||||| || |||||||||    
T  3086479 ggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa 3086426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 28536756 - 28536807
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||| |||| ||||||||||||||||    
T  28536756 cctccggtcctatttataagagaattttggatcaataaaagttgatgtatct 28536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 36033242 - 36033285
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctgat 226  Q
    |||||||||| || ||| ||||||||||||||||||||||||||    
T  36033242 atttataagataaatttaggtcaacaaaagttgatgtatctgat 36033285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 7661190 - 7661150
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  7661190 atttatatgagacatttgggtcaacaaaagttgatgtatct 7661150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 7579435 - 7579384
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7579435 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatct 7579384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 51894587 - 51894639
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  51894587 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctg 51894639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 3422185 - 3422134
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  3422185 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 3422134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 6121898 - 6121949
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6121898 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 6121949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 47833736 - 47833685
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  47833736 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 47833685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 3993090 - 3993050
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3993090 atttataagagaattttgggtcaacaaaagttgatgtatct 3993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 5987000 - 5986952
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 5986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 3372246 - 3372195
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3372246 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatct 3372195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 20538691 - 20538742
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  20538691 cctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatct 20538742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 33621921 - 33621870
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  33621921 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatct 33621870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 41469771 - 41469822
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  41469771 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 41469822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 42797857 - 42797806
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  42797857 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatct 42797806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 43900674 - 43900623
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  43900674 cctccggtcctatttataagagaattttgggttaacaaaagttgatgtatct 43900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 46797850 - 46797799
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  46797850 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatct 46797799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 47838622 - 47838673
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  47838622 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatct 47838673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 48336388 - 48336337
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  48336388 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatct 48336337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 53337495 - 53337444
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  53337495 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatct 53337444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 3904688 - 3904737
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  3904688 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtat 3904737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 24704484 - 24704444
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  24704484 atttataagagaattttgggtcaacaaaagttaatgtatct 24704444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 52756789 - 52756749
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  52756789 atttataaaagaattttgggtcaacaaaagttgatgtatct 52756749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 4780420 - 4780366
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctgat 226  Q
    |||||||| | ||||||||||||| ||| |||||||||||||| |||||||||||    
T  4780420 cctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgat 4780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 17236912 - 17236864
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    ||||||| | |||||||||| || |||||||||||||||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17344327 - 17344288
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatc 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  17344327 atttataagagaaatttggatcaacaaaagttgatgtatc 17344288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 40913194 - 40913244
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatc 222  Q
    |||||||| | ||||||||||||| ||||| ||||||||||||||| ||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagttgatatatc 40913244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 33551312 - 33551275
Alignment:
Q  186 tataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatct 33551275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 46797730 - 46797771
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagt 213  Q
    |||||||||| ||||||||||||| ||| |||||||||||||    
T  46797730 cctccggttctatttataagagaaatttaggtcaacaaaagt 46797771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 17344219 - 17344271
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctga 225  Q
    ||||||||| |||||||||||||  ||   |||||||||||||||||||||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctga 17344271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 41594660 - 41594708
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    ||||||| |||  ||||||||||  ||||||||||||||||||||||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtat 41594708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 34042821 - 34042770
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34042821 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatct 34042770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9981772 - 9981721
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 11796058 - 11796007
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11796058 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 11796007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 14984962 - 14984911
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  14984962 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 14984911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 25694444 - 25694393
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  25694444 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 25694393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 27159363 - 27159414
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  27159363 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 27159414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 31842800 - 31842851
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  31842800 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 31842851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 39401971 - 39402022
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  39401971 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 39402022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 44668098 - 44668149
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  44668098 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 44668149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 47216704 - 47216755
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  47216704 cctccggtactatttataagagaattttgggtcaacaaaagttgatgtatct 47216755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 47777486 - 47777537
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  47777486 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 47777537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 12483633 - 12483682
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  12483633 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 12483682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 47588353 - 47588393
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47588353 atttataagagaattttgggtcaacaaaagttgatgtatct 47588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 1051013 - 1050962
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  1051013 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatct 1050962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 26471070 - 26471121
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  26471070 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatct 26471121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 11897179 - 11897129
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatc 222  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  11897179 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatc 11897129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 44955212 - 44955262
Alignment:
Q  173 ctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatct 44955262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 16448233 - 16448181
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctg 224  Q
    |||||||| | |||||||||||||  |||||||||||||||||||||||||||    
T  16448233 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctg 16448181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 23278021 - 23278057
Alignment:
Q  187 ataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatct 23278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 17556878 - 17556827
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||||||    
T  17556878 cctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatct 17556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 11897059 - 11897112
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatctga 225  Q
    |||||||| | |||||||||||||  || |||||||||||||||||||||||||    
T  11897059 cctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctga 11897112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 47969820 - 47969769
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||| | |||||||| |||||||||||||||||||||    
T  47969820 cctccggtcctatttataaaataattttggatcaacaaaagttgatgtatct 47969769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 21537983 - 21537941
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatctga 225  Q
    |||||||||||||  ||| ||||||||||||||||||||||||    
T  21537983 atttataagagaaaattgagtcaacaaaagttgatgtatctga 21537941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 3055683 - 3055632
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  3055683 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 3055632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 6648524 - 6648575
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6648524 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 6648575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 9047760 - 9047811
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9047760 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 9047811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 12337942 - 12337993
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  12337942 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 12337993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 13197715 - 13197766
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13197715 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 13197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 15372351 - 15372300
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  15372351 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 15372300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 15896967 - 15896916
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  15896967 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 15896916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 37990018 - 37990069
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  37990018 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 37990069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 38917527 - 38917578
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38917527 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 38917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 41478644 - 41478695
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  41478644 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 41478695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 44398811 - 44398760
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  44398811 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 44398760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 16243790 - 16243839
Alignment:
Q  174 tccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 16243839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 44397661 - 44397621
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44397661 atttataagagaattttgggtcaacaaaagttgatgtatct 44397621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 13344609 - 13344558
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  13344609 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatct 13344558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 16044322 - 16044373
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  16044322 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatct 16044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 30099187 - 30099238
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  30099187 cctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatct 30099238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 37666615 - 37666666
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  37666615 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatct 37666666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 41492901 - 41492952
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  41492901 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatct 41492952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 44804583 - 44804634
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||||||||||  || |||||||||||||||||||    
T  44804583 cctccggtcctatttataagagaattttaagttaacaaaagttgatgtatct 44804634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 12170415 - 12170453
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  12170415 atttataagagaaacttgggtcaacaaaagttgatgtat 12170453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 20900674 - 20900720
Alignment:
Q  177 ggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||||    
T  20900674 ggttctatttataagagacatttgggtcagcaaaagttgatgtatct 20900720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 49630 - 49581
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtat 221  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  49630 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 49581  T

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Target: scaffold1707 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 1449 - 1409
Alignment:
Q  183 atttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1449 atttataagagaattttgggtcaacaaaagttgatgtatct 1409  T

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Target: scaffold0482 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 12985 - 12934
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  12985 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatct 12934  T

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Target: scaffold0464 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 6136 - 6187
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  6136 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatct 6187  T

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Target: scaffold0204 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 23910 - 23859
Alignment:
Q  172 cctccggttccatttataagagaattttgggtcaacaaaagttgatgtatct 223  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  23910 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatct 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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