View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10840_low_11 (Length: 222)
Name: NF10840_low_11
Description: NF10840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10840_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 41852778 - 41852560
Alignment:
| Q |
4 |
atatctcattccaatcaatgataaattacacaaaatacagaattttatttacaaacaaaacaatcgagaggatggcaaaactgtcggtgatttttaagac |
103 |
Q |
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| T |
41852778 |
atatctcattccaatcaatgataaattacacaaaatacagaattttatttacaaacaaaacaatcgagaggatggcaaaactgtcggtgatttttaagac |
41852679 |
T |
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| Q |
104 |
aaatatagaaaaccacagccaaaatttggaggcacatctgagtcaatggaacaaattacaataacactggcaatagtaagagcaatgagtccaaatatca |
203 |
Q |
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| T |
41852678 |
aaatatagaaaatcacagccaaaatttggaggcacatctgagtcaatggaacaaattacaataacactggcaatagtaagagcaatgagtccaaatatca |
41852579 |
T |
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| Q |
204 |
gaccttcatcccaggtttc |
222 |
Q |
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||||||||||||||||||| |
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| T |
41852578 |
gaccttcatcccaggtttc |
41852560 |
T |
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