View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_high_12 (Length: 343)
Name: NF10841_high_12
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 11 - 329
Target Start/End: Original strand, 35617611 - 35617929
Alignment:
| Q |
11 |
cacagacttctgcaacggtggagtctcatgcaaatctgattcaatcacttgatgcttcctcgaatcatagcaaggaagaaataaacgacggaagggattt |
110 |
Q |
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| T |
35617611 |
cacagacttctgcaacggtggagtctcatgcaaatctgattcaatcacttgatgcttcctcgaatcatagcaaggaagaaataaacgacagaagggattt |
35617710 |
T |
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| Q |
111 |
tgaggtaactgagagagcaaggaatgacaagaatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacaaaaacagtcaag |
210 |
Q |
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| T |
35617711 |
tgaggtaactgagagagcaaggaatgacaagaatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacaaaagcagtcaag |
35617810 |
T |
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| Q |
211 |
tttccagtttacgatactgggatattggaggaggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgcaggaagatcttaaacatg |
310 |
Q |
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||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
35617811 |
tttccggtttgcgatactgggataatggaggaggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgaaggaagatcttaaacatg |
35617910 |
T |
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| Q |
311 |
gtactagtactactgatgt |
329 |
Q |
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||||||||||||||||||| |
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| T |
35617911 |
gtactagtactactgatgt |
35617929 |
T |
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