View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_high_13 (Length: 343)
Name: NF10841_high_13
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 18 - 330
Target Start/End: Complemental strand, 20923072 - 20922760
Alignment:
| Q |
18 |
gacttaatacacgacatatctttagtcattcacgatacaccctagtcgtattaggataagtataattacccacctgaatcacttctagaacttatctctt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20923072 |
gacttaatacacgacatatctttagtcattcacgatacaccctagtcgtattaggataagtataattacccacctgaatcacttctagaacttatctctt |
20922973 |
T |
|
| Q |
118 |
aaggaaaaaacatacttcgtctttgtataacactgtgttagctactggaatatgaaacaaattatcccatctttcttagtcttgcattaatatcttaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20922972 |
aaggaaaaaacatacttcgtctttgtataacactgtgttagctactggaatatgaaacaaattatcccatctttcttagtcttgcattaatatcttaaat |
20922873 |
T |
|
| Q |
218 |
atgcacagtcccataccttaggtcacatatgatttccaatttgtgataacgttcttttccgtaccttcgtaacattgagtttaaactctctaactaatat |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
20922872 |
atgcacagtcccataccttaggtcacatatgatttccaatttgtgataacgttcttttctgtaccttcgtaacattgagtttaaactctctaactaatat |
20922773 |
T |
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| Q |
318 |
gtgttcggtatct |
330 |
Q |
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||||||||||||| |
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| T |
20922772 |
gtgttcggtatct |
20922760 |
T |
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