View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_119 (Length: 220)
Name: NF10841_low_119
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_119 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 34541504 - 34541295
Alignment:
| Q |
1 |
ttaattattctatcgggttctgtgttgcttggtgtatttatgataattcaactgcttttttaggatgcttgaaaagaggagtttgagctataatggtgga |
100 |
Q |
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| T |
34541504 |
ttaattattctatcgggttctgtgttgcttggtgtatttatgataattcaactgcttttttaggatgcttgaaaagaggagtttgagctataatggtgga |
34541405 |
T |
|
| Q |
101 |
ccgattcctgttccccttgacgaaccctttcttgcagataatgtgcaaagaatttgcgtttgtgatacaggtctctatcttttgtttgtttattttcaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
34541404 |
ccgattcctgttccccttgacgaaccctttcttgcagataatgtgcaaagaatttgcgtttgtgatacaggtctctatcttttgtttatttattttcaat |
34541305 |
T |
|
| Q |
201 |
tgtctctatg |
210 |
Q |
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|||||||||| |
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| T |
34541304 |
tgtctctatg |
34541295 |
T |
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