View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_132 (Length: 212)
Name: NF10841_low_132
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_132 |
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Alignment Details
Target: chr7 (Bit Score: 125; Significance: 1e-64; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 26880754 - 26880914
Alignment:
| Q |
34 |
tgcatgaatgtaagaaacaaagcaaacttgtcagttaatgaagaccaagaaccaattacgacacgtacctgaacaaatataattttaagaacaattaatc |
133 |
Q |
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| T |
26880754 |
tgcatgaatgtaagaaacaaagcaaacttgtcagttaatgaagaccaagaacaaatcacgatacgtacctgaacacatacaattttaagaagaattaatc |
26880853 |
T |
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| Q |
134 |
acctaaggctcactaccatcagggttgaaaatcctcatcgtatagtcagtgccattgatac |
194 |
Q |
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|||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
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| T |
26880854 |
acctcaggctcactaccatcagagttgaaaatcctcattgtatagtcagtgccattgatac |
26880914 |
T |
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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 40252464 - 40252524
Alignment:
| Q |
134 |
acctaaggctcactaccatcagggttgaaaatcctcatcgtatagtcagtgccattgatac |
194 |
Q |
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|||| ||||||||||||||||| ||||||||||||||| ||||| ||||| |||| ||||| |
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| T |
40252464 |
acctcaggctcactaccatcagagttgaaaatcctcattgtataatcagtaccatcgatac |
40252524 |
T |
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