View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10841_low_14 (Length: 409)

Name: NF10841_low_14
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10841_low_14
NF10841_low_14
[»] chr6 (36 HSPs)
chr6 (23-392)||(8465794-8466148)
chr6 (20-204)||(12039805-12039989)
chr6 (20-204)||(13195175-13195359)
chr6 (20-204)||(9281832-9282016)
chr6 (20-204)||(20989888-20990072)
chr6 (26-204)||(25948380-25948558)
chr6 (47-204)||(20558154-20558311)
chr6 (20-204)||(15897797-15897981)
chr6 (20-210)||(14258756-14258946)
chr6 (20-204)||(25805305-25805489)
chr6 (20-204)||(25782662-25782847)
chr6 (20-204)||(17234443-17234627)
chr6 (21-204)||(33665645-33665828)
chr6 (22-204)||(17855046-17855228)
chr6 (20-142)||(20470326-20470448)
chr6 (20-149)||(23882817-23882945)
chr6 (20-204)||(17864548-17864719)
chr6 (30-142)||(29255048-29255160)
chr6 (33-122)||(21706486-21706575)
chr6 (54-210)||(21717702-21717858)
chr6 (54-210)||(21725538-21725694)
chr6 (20-119)||(17528008-17528107)
chr6 (23-105)||(17869944-17870026)
chr6 (23-105)||(17879696-17879778)
chr6 (22-152)||(26965696-26965826)
chr6 (33-105)||(12385261-12385333)
chr6 (131-204)||(19077416-19077489)
chr6 (20-65)||(30424926-30424971)
chr6 (20-68)||(24501812-24501860)
chr6 (131-209)||(34991217-34991295)
chr6 (20-69)||(12444843-12444891)
chr6 (164-204)||(13870563-13870603)
chr6 (165-204)||(19894781-19894820)
chr6 (24-59)||(20765121-20765156)
chr6 (308-390)||(8459794-8459876)
chr6 (20-65)||(18152829-18152874)
[»] chr8 (18 HSPs)
chr8 (20-210)||(11221390-11221580)
chr8 (20-204)||(23541534-23541719)
chr8 (20-204)||(33976910-33977094)
chr8 (50-204)||(27925576-27925730)
chr8 (22-204)||(45133516-45133698)
chr8 (20-198)||(33961619-33961797)
chr8 (20-204)||(24091824-24091993)
chr8 (20-204)||(25240257-25240441)
chr8 (25-110)||(22485089-22485174)
chr8 (42-204)||(22472634-22472798)
chr8 (28-68)||(9996487-9996527)
chr8 (20-68)||(20255006-20255054)
chr8 (20-67)||(1562490-1562537)
chr8 (20-66)||(12240228-12240274)
chr8 (20-65)||(12814715-12814760)
chr8 (157-204)||(22480973-22481020)
chr8 (20-53)||(24384564-24384597)
chr8 (207-264)||(32513492-32513549)
[»] chr7 (36 HSPs)
chr7 (20-204)||(16208004-16208188)
chr7 (20-204)||(4458591-4458775)
chr7 (33-204)||(11998731-11998902)
chr7 (20-204)||(16436626-16436810)
chr7 (33-204)||(12325677-12325848)
chr7 (20-142)||(20991455-20991578)
chr7 (20-204)||(11521533-11521716)
chr7 (21-204)||(644985-645168)
chr7 (55-204)||(29546288-29546436)
chr7 (20-204)||(13455235-13455418)
chr7 (20-204)||(11588316-11588500)
chr7 (26-149)||(10279722-10279845)
chr7 (35-122)||(14165100-14165186)
chr7 (22-97)||(26133039-26133114)
chr7 (32-86)||(20925232-20925286)
chr7 (20-68)||(21260503-21260551)
chr7 (20-107)||(14926596-14926683)
chr7 (20-107)||(15350062-15350149)
chr7 (20-66)||(20596947-20596993)
chr7 (20-66)||(23057196-23057242)
chr7 (20-105)||(24902059-24902142)
chr7 (26-66)||(7586658-7586698)
chr7 (20-68)||(10658371-10658419)
chr7 (20-67)||(31269177-31269224)
chr7 (27-65)||(10038864-10038902)
chr7 (20-66)||(11407072-11407118)
chr7 (20-65)||(10251431-10251476)
chr7 (78-170)||(10279621-10279712)
chr7 (20-68)||(42636235-42636283)
chr7 (20-58)||(10309612-10309650)
chr7 (20-65)||(7508426-7508471)
chr7 (20-57)||(9894189-9894226)
chr7 (20-65)||(14687358-14687403)
chr7 (20-57)||(23296499-23296536)
chr7 (20-65)||(23580076-23580121)
chr7 (32-69)||(23956864-23956901)
[»] chr1 (21 HSPs)
chr1 (20-204)||(11667985-11668168)
chr1 (20-201)||(4245890-4246071)
chr1 (20-204)||(26972523-26972706)
chr1 (20-207)||(1973163-1973349)
chr1 (20-146)||(20859665-20859791)
chr1 (20-195)||(14745905-14746080)
chr1 (39-204)||(13165249-13165414)
chr1 (83-204)||(9451993-9452113)
chr1 (21-102)||(17851496-17851577)
chr1 (32-146)||(20841399-20841513)
chr1 (20-113)||(23478057-23478151)
chr1 (21-105)||(41330925-41331009)
chr1 (20-66)||(18390227-18390273)
chr1 (20-65)||(17355953-17355998)
chr1 (20-65)||(17379745-17379790)
chr1 (20-69)||(15804233-15804282)
chr1 (21-105)||(10340280-10340364)
chr1 (20-68)||(12753049-12753097)
chr1 (23-66)||(18379856-18379899)
chr1 (170-204)||(20841526-20841560)
chr1 (20-65)||(51472215-51472260)
[»] scaffold0226 (3 HSPs)
scaffold0226 (25-209)||(18255-18437)
scaffold0226 (25-209)||(27649-27831)
scaffold0226 (20-204)||(7663-7847)
[»] chr3 (27 HSPs)
chr3 (20-204)||(295312-295496)
chr3 (33-209)||(44452327-44452503)
chr3 (20-181)||(28051011-28051172)
chr3 (47-204)||(20748312-20748469)
chr3 (20-204)||(13790531-13790715)
chr3 (20-204)||(15635996-15636180)
chr3 (26-204)||(1919364-1919542)
chr3 (20-202)||(19532006-19532188)
chr3 (30-204)||(19633739-19633913)
chr3 (20-204)||(18035018-18035203)
chr3 (20-122)||(17702340-17702442)
chr3 (20-204)||(18064328-18064515)
chr3 (26-121)||(24195459-24195554)
chr3 (20-111)||(18547593-18547684)
chr3 (20-142)||(13524804-13524925)
chr3 (20-141)||(23954680-23954802)
chr3 (20-69)||(15686280-15686329)
chr3 (26-122)||(17140434-17140531)
chr3 (20-68)||(6580989-6581037)
chr3 (20-67)||(14406752-14406799)
chr3 (165-204)||(17702259-17702298)
chr3 (35-69)||(15686417-15686451)
chr3 (20-68)||(17042876-17042924)
chr3 (20-75)||(9031504-9031558)
chr3 (27-57)||(31649690-31649720)
chr3 (20-57)||(3552336-3552373)
chr3 (20-109)||(13913739-13913827)
[»] chr4 (25 HSPs)
chr4 (21-204)||(10724111-10724294)
chr4 (21-204)||(10937880-10938063)
chr4 (20-204)||(10190738-10190922)
chr4 (47-204)||(8163634-8163791)
chr4 (21-204)||(25116675-25116858)
chr4 (23-204)||(16383741-16383923)
chr4 (23-204)||(15162614-15162795)
chr4 (20-204)||(21477960-21478143)
chr4 (20-97)||(33899112-33899189)
chr4 (20-101)||(28019259-28019340)
chr4 (20-204)||(15700434-15700604)
chr4 (34-119)||(23400326-23400412)
chr4 (20-204)||(18618240-18618422)
chr4 (20-70)||(13399427-13399477)
chr4 (20-66)||(32861637-32861683)
chr4 (20-68)||(9068933-9068981)
chr4 (20-67)||(50907840-50907887)
chr4 (24-66)||(2679839-2679881)
chr4 (20-66)||(26244988-26245034)
chr4 (20-66)||(33737973-33738019)
chr4 (20-69)||(41785421-41785470)
chr4 (156-204)||(13399576-13399624)
chr4 (20-76)||(25354759-25354814)
chr4 (20-68)||(33745951-33745999)
chr4 (164-204)||(33899450-33899490)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-204)||(26256-26440)
[»] chr5 (19 HSPs)
chr5 (20-204)||(13735097-13735281)
chr5 (20-204)||(30605814-30605995)
chr5 (33-210)||(9422604-9422781)
chr5 (20-189)||(26036677-26036846)
chr5 (20-204)||(22404885-22405069)
chr5 (20-110)||(24189808-24189898)
chr5 (20-204)||(25105544-25105729)
chr5 (20-204)||(25164637-25164822)
chr5 (20-114)||(23420685-23420779)
chr5 (20-204)||(26329337-26329521)
chr5 (20-210)||(18220971-18221146)
chr5 (21-87)||(23623846-23623912)
chr5 (26-105)||(13338543-13338622)
chr5 (20-70)||(20714860-20714910)
chr5 (20-69)||(17661534-17661583)
chr5 (20-121)||(20845918-20846018)
chr5 (20-65)||(13942121-13942166)
chr5 (20-65)||(24117586-24117631)
chr5 (26-65)||(22979736-22979775)
[»] scaffold0103 (1 HSPs)
scaffold0103 (20-204)||(25797-25981)
[»] scaffold0259 (1 HSPs)
scaffold0259 (20-204)||(17401-17585)
[»] chr2 (16 HSPs)
chr2 (20-204)||(23758477-23758661)
chr2 (20-204)||(12910341-12910525)
chr2 (33-204)||(22610744-22610915)
chr2 (20-141)||(24790282-24790403)
chr2 (20-121)||(36398918-36399019)
chr2 (20-106)||(21250320-21250407)
chr2 (20-70)||(19466646-19466696)
chr2 (32-105)||(22582363-22582437)
chr2 (20-66)||(12952462-12952508)
chr2 (21-67)||(20649681-20649727)
chr2 (20-109)||(21530331-21530421)
chr2 (28-65)||(31587467-31587504)
chr2 (20-56)||(24283652-24283688)
chr2 (26-65)||(27111071-27111110)
chr2 (20-50)||(25347199-25347229)
chr2 (20-67)||(24317933-24317981)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-207)||(87585-87758)
[»] scaffold0059 (2 HSPs)
scaffold0059 (20-204)||(50215-50400)
scaffold0059 (20-204)||(61597-61781)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-196)||(110380-110557)
[»] scaffold0185 (1 HSPs)
scaffold0185 (22-209)||(2484-2671)
[»] scaffold0190 (1 HSPs)
scaffold0190 (20-204)||(16748-16932)
[»] scaffold0338 (1 HSPs)
scaffold0338 (47-204)||(16363-16521)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-204)||(36857-37041)
[»] scaffold0333 (1 HSPs)
scaffold0333 (30-204)||(5496-5672)
[»] scaffold0008 (1 HSPs)
scaffold0008 (20-149)||(40240-40370)
[»] scaffold0423 (1 HSPs)
scaffold0423 (20-67)||(13596-13643)
[»] scaffold0520 (1 HSPs)
scaffold0520 (23-65)||(5409-5451)
[»] scaffold0505 (1 HSPs)
scaffold0505 (20-65)||(10159-10204)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-65)||(202386-202431)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-68)||(3111-3158)


Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 23 - 392
Target Start/End: Original strand, 8465794 - 8466148
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttat 122  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||    
T  8465794 agcccccagagtaggtgtgtttgtcaccgaaatgggtcaacaaactcattgtgttctttactttcctgtcatttactttcttgtttttatttcagtttat 8465893  T
Q  123 ttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagatcgggctttggtc 222  Q
    ||||||| ||||||||||||||||||| ||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8465894 ttcgtgatgttggaacattgaacggaacattgcaaacgttaaaacatcatatagaacatattaaaacaagtgcgctagaattacagatcgggctttggtc 8465993  T
Q  223 gcatcttgcgcaacaacaatgacgacatgttacttgggttcttcggctcactaattccttatgtgtcgaatgccgctgaattaattgcaattttaaatgg 322  Q
    |||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |                   
T  8465994 gcatgtctcgcaacaacaatgacgacttgttacttgggttcttcggctcactaattccttatgtgccgaataccgctgaattact--------------- 8466078  T
Q  323 tctcaagattgctcaatctgaaagattcaggaatattatcattaaattagcttccactctaacagttgat 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8466079 tctcaagattgctcaatctgaaagattcaggaatattatcattaaattagattccactctaacagttgat 8466148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 12039805 - 12039989
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||| ||||    
T  12039805 ggtagcccccaaagtaggtgtgttcgtcaccgaactaggtcaacaaactcattgtgttctttactttcttgtcgtttattttcttgtttttatttctgtt 12039904  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||| ||||||  ||||||||||||||| || ||||  |||||||||||||| |  | |||||||||||||||||| |||||||||    
T  12039905 tatctcgtgatattggaacattgaacgaaacattgcaaacgttaaaacatcgtgtagaacatattaaaacaagtgtgctagaatt 12039989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 13195359 - 13195175
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  13195359 ggtagcccctagagtaggtgtgtttgtcatcgaactaggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttatgtt 13195260  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| ||||| |||| |||||| |  | || ||||  |||| |||||||||||||  |||||||||||||| ||| |||||||||    
T  13195259 tattgcgtgatgttgaaacattaattgtaacattgcaaacgctaaaacatcataccaaacatattaaaacacgtgtgctagaatt 13195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 9281832 - 9282016
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||| ||||| |||| ||  |||||||||||| ||||    
T  9281832 ggtagcccccagagtaggtgtgtttgtcaccgaactagatcaacaaactcattgtgttcattacttttctgtcttttatttaattgtttttatttctgtt 9281931  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  | ||| |||||||||||||||  || ||||  ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  9281932 tatcgcttgatgttggaacattgaacttaacattgaaaactttaaaacatcatacataacgtattaaaacaagtgcgctagaatt 9282016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 20989888 - 20990072
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||  ||||||| |||||||||||||||| |  |    
T  20989888 ggtagcccccagagtaggtgtgtctgtcaccgaactgggtcaacaaactcattgtgttatttactttcccatcatttattttcttgtttttatttctact 20989987  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||   |||| ||||||||||||| ||||| ||||  || | |||||||||||||| |||||||||||||||||| |||||||||    
T  20989988 tatcgtgtgatgttggaacattgatcggaacattgcaaatgctaaaacatcatacagaacatattaaaacaagtgagctagaatt 20990072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 25948558 - 25948380
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttc 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||  |    
T  25948558 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatcgc 25948459  T
Q  126 gtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| |||| |||||| | || |  ||||  |||| | ||||| |||||||||  |||||||||||||| |||||||||    
T  25948458 gtgatgttgaaacattaatcgtatcattgcaaacgctgaaacaacatacataatgtattaaaacaagtgtgctagaatt 25948380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 20558311 - 20558154
Alignment:
Q  47 caccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 146  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| |||||||  ||||| ||||||||||||||||    
T  20558311 caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttctgtttatcgcgtgatgttggaacattgaacg 20558212  T
Q  147 gaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     || || |  |||||||||||||||||||||||||||||||||||||||||| |||||    
T  20558211 taacatcgcaaacgttaaaacatcatacataacatattaaaacaagtgcgctcgaatt 20558154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 15897797 - 15897981
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||| |||||| || ||||    
T  15897797 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattttgttctttactttcttgtcttttattttcttatttttacttctgtt 15897896  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| ||| ||||||  || ||||   ||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15897897 tatcgcgtgatgttgaaaccttgaacaaaacattgcatacgttaaaacatcgtacataacatattaaaacaagtgtgttagaatt 15897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 14258946 - 14258756
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |  |||| |||||||||||||||| || |    
T  14258946 ggtagcccccaaagtaggtgtgtttctcaccgaactgggtcaacaaactcattgtgttctttactttcctattgtttattttcttgtttttatttctgct 14258847  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    |||  ||||| |||| |||||| | || || ||||  ||||||||||||||||| | |||||||||||||||||||| || |||| |||||    
T  14258846 tatcgcgtgatgttgaaacattaatcgtaacattgcaaacgttaaaacatcataaaaaacatattaaaacaagtgcgttaaaatttcagat 14258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 25805489 - 25805305
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||| | ||||||||||||||||||||||| |||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||| | ||    
T  25805489 ggtagcctctagagtaggtgtgtttgtcaccgatctggtttaacaaaatcattgtgttctttactttcctgtcatttactttcttgtttttatttctttt 25805390  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||   | || |||| ||||||||||| || ||| | |||| | |||||||||||| |||||||||||||||||||| |||||||    
T  25805389 tatcaagcgatgttgaaacattgaacgaaacattataaacgcttaaacatcatacagaacatattaaaacaagtgcgatagaatt 25805305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 25782847 - 25782662
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattg-tgttcttttctttcctgtcatttactttcttgtttttatttatgt 118  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||   ||||||||||||||||||||||||||||||| |||    
T  25782847 ggtagcctccagagtaggtgtgtttgtcaccgaactgggttaacaaactcactgttgttcttaaatttcctgtcatttactttcttgtttttatttctgt 25782748  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| ||| || |||| | ||||||| | || |||   || | | ||||||| |||||||||||||||||||||||||||||||||    
T  25782747 ttatctcgcgatgttgaagcattgaatgaaacattacaaatgcttaaacatcgtacataacatattaaaacaagtgcgctagaatt 25782662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 17234627 - 17234443
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| | ||    
T  17234627 ggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttatttttatttctatt 17234528  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| || ||| | || || ||||  || |   ||||||||||||||| ||||||||||||||| |||||||||    
T  17234527 tatcacgtgatgttgaaatattaatcgtaacattgcaaatgccgaaacatcatacataatatattaaaacaagtgtgctagaatt 17234443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 33665828 - 33665645
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttt 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||||| |||||    
T  33665828 gtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttatttactttcctatcatttattttcttgtttttatttctgttt 33665729  T
Q  121 atttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||   |||| |||  |||||| | || || ||||  |||     ||||||||||| ||||||||||||||||||||||||||||    
T  33665728 atcgtgtgatgttaaaacattaatcgtaacattgcaaacaccgtaacatcatacagaacatattaaaacaagtgcgctagaatt 33665645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 17855228 - 17855046
Alignment:
Q  22 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttta 121  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||| || | ||||    
T  17855228 tagcctccagagtaggtgtgtttgtcaccgatctgggtcaacaaactcattgcgttctttactttcctgtcttttattttcttgtttttaattctattta 17855129  T
Q  122 tttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |   |||| |||| |||||| | || || || |  ||  ||||||||||||||| ||| |||||||||||||| |||||||||    
T  17855128 tcgtgtgatgttgaaacattaatcgtaacatcgcaaatattaaaacatcatacaaaacgtattaaaacaagtgtgctagaatt 17855046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 20470326 - 20470448
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| | || | ||    
T  20470326 ggtagcctccagagtaggtgtgattgtcgccgaactgggtcaacaaactcattatgttctttactttcctgtcatttattttcttgttttaaattctatt 20470425  T
Q  120 tatttcgtgacgttggaacattg 142  Q
    |||||||||| ||||||||||||    
T  20470426 tatttcgtgatgttggaacattg 20470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 23882817 - 23882945
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| || ||||||||  |||    
T  23882817 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcgtgtcatttattttcatgctttttatt--tgt 23882914  T
Q  119 ttatttcgtgacgttggaacattgaacggaa 149  Q
    ||| | | ||| ||||||||||| |||||||    
T  23882915 ttactgcatgatgttggaacattaaacggaa 23882945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 17864548 - 17864719
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgttttt-atttatgt 118  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||              || ||||||||||||||| |||| | |    
T  17864548 ggtaacccccagagtaggtgtgtttgtcaccgaactaggtcaacaaacttactgtgttc--------------atctactttcttgttttttatttctat 17864633  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||| |||| |||||||||||| | ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  17864634 ttatttcgtgatgttgcaacattgaacggtacattgtaaacgttgaaacatcttacataacatattaaaacaagtgcgctagaatt 17864719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 29255048 - 29255160
Alignment:
Q  30 agagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtga 129  Q
    |||||||||||||||| ||| ||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  29255048 agagtaggtgtgtttgccactgaactgggtcaacaaactcaccgtgttctttactttcttgtcatttactttcttgtttttatttgagtttaattcgtga 29255147  T
Q  130 cgttggaacattg 142  Q
     ||||||||||||    
T  29255148 tgttggaacattg 29255160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 21706486 - 21706575
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttat 122  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||    
T  21706486 gtaggtgtgtttgtcaccaaactgggttaacaaactcattgtgttctttactttcctgtcgattattttcttgtttttatttatgtttat 21706575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 21717702 - 21717858
Alignment:
Q  54 ctgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatatt 153  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||| |||||||  ||||| ||||||||||| ||||||| |||    
T  21717702 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21717801  T
Q  154 gttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    |  ||| ||||||||||  ||| ||  || |||||||||  |||||||||| |||||    
T  21717802 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcagat 21717858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 21725538 - 21725694
Alignment:
Q  54 ctgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatatt 153  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||| |||||||  ||||| ||||||||||| ||||||| |||    
T  21725538 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21725637  T
Q  154 gttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    |  ||| ||||||||||  ||| ||  || |||||||||  |||||||||| |||||    
T  21725638 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcagat 21725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 17528008 - 17528107
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| | |||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||||||||||| ||||    
T  17528008 ggtagccccaatagtaggtgtgtttgtcactgaactgggttaacaaactcactgtgttctttactttcctgtcttttattttcttgtttttatttctgtt 17528107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 17869944 - 17870026
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  17869944 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17870026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 17879696 - 17879778
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  17879696 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 26965696 - 26965826
Alignment:
Q  22 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttta 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  |||||   ||| ||||| ||||||||| |||||||   | ||||||||||     
T  26965696 tagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactgtttgtgccttttactttcttgtcatttattttcttg-cataatttatgtttg 26965794  T
Q  122 tt-tcgtgacgttggaacattgaacggaatat 152  Q
    || || ||| ||| ||||||||||||||||||    
T  26965795 ttatcatgatgttagaacattgaacggaatat 26965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 12385261 - 12385333
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  12385261 gtaggtgtgtttgtcatcgaactgggccaacaaactcactgtgttctttactttcttgtcatttattttcttg 12385333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 19077489 - 19077416
Alignment:
Q  131 gttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||||| || || ||||  || ||||||| |||||||| ||||||||||||||||||| ||||||||    
T  19077489 gttggaacattgatcgtaacattgcaaatgttaaaatatcatacagaacatattaaaacaagtgcactagaatt 19077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 30424971 - 30424926
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  30424971 ggtagcccctagagtaggtgtgtttgtcaccgaactggttcaacaa 30424926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 24501860 - 24501812
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  24501860 ggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaact 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 34991217 - 34991295
Alignment:
Q  131 gttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 209  Q
    ||||||||||| ||||||| ||||   ||||||||||||   ||| |||||||||||| ||||||||||||||| ||||    
T  34991217 gttggaacattaaacggaacattgcagacgttaaaacatatgacagaacatattaaaataagtgcgctagaatttcaga 34991295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 12444843 - 12444891
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  12444843 ggtagcctccagagtaggtgtgtt-gtcaccgaactgggttaacaaactc 12444891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 13870563 - 13870603
Alignment:
Q  164 aaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  13870563 aaacatcattcagaacatattaaaacaagtgcgctagaatt 13870603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 19894781 - 19894820
Alignment:
Q  165 aacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  19894781 aacatcatacagaacatattaaaacaagtgtgctagaatt 19894820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 20765121 - 20765156
Alignment:
Q  24 gcccccagagtaggtgtgtttgtcaccgaactgggt 59  Q
    |||||||||||| |||||||||||||||||||||||    
T  20765121 gcccccagagtaagtgtgtttgtcaccgaactgggt 20765156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 8459794 - 8459876
Alignment:
Q  308 tgcaattttaaatggtctcaagattgctcaatctgaaagattcaggaatattatcattaaattagcttccactctaacagttg 390  Q
    ||||||||||||||||||||| ||||||||| ||  |  ||| || ||||||||| || ||| || || ||||||||||||||    
T  8459794 tgcaattttaaatggtctcaaaattgctcaaactagacaattgagaaatattatcgttgaataagatttcactctaacagttg 8459876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18152829 - 18152874
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  18152829 ggtagcctccatagtaggtgtgtttgtcactgaactgggttaacaa 18152874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 8e-68; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 11221390 - 11221580
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  11221390 ggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtt 11221489  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    |||||| ||| ||||||||||||||||||| ||||  |||||| ||||||| |||| |||| ||||||||||||||||||||||| |||||    
T  11221490 tatttcatgatgttggaacattgaacggaacattgaaaacgtttaaacatcgtacaaaacaaattaaaacaagtgcgctagaatttcagat 11221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 23541534 - 23541719
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| || |    
T  23541534 ggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacattcctgtcatttattttcttgtttttatttctgct 23541633  T
Q  120 tatttcgtgacgttggaacattgaacg-gaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| ||||||||||||| ||  || ||||  |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  23541634 tatcgcgtgatgttggaacattgatcgtaaacattgcaaacgttaaaacatcatacataacatattaaaataagtgcggtagaatt 23541719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 33977094 - 33976910
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||  || |||||| ||||| ||||||||| ||||||||||| |||| ||||    
T  33977094 ggtagcccccagagtaggtgcgtttgttaccgaactgggtcaacaaactcacagtattctttactttcttgtcatttattttcttgttttgatttctgtt 33976995  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||||||||| ||||||||||||||||||| |||   ||  || ||||||| |||| |||||||||||||||||| |||||||||    
T  33976994 tatttcgtgatgttggaacattgaacggaacattacaaatattgaaacatcttacaaaacatattaaaacaagtgtgctagaatt 33976910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 27925576 - 27925730
Alignment:
Q  50 cgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaa 149  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||| ||    
T  27925576 cgaactgggtcaacaaactcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatttcgtgatgttgaaacattgaacgaaa 27925675  T
Q  150 tattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     ||||   |||||||||||||  ||||||||||||||||||| ||||||||||||    
T  27925676 cattgcatacgttaaaacatctgacataacatattaaaacaaatgcgctagaatt 27925730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 45133698 - 45133516
Alignment:
Q  22 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||| |||| |||||||||||||||| ||||||    
T  45133698 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcaatgtgtcctttactttcttgtcgtttattttcttgtttttatttctgttta 45133599  T
Q  122 tttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |  | ||| ||| ||||||||||| ||| ||||  || ||||||||||| || | ||||||||||||||||||| ||||||||    
T  45133598 tcgcatgatgttagaacattgaacagaacattgcaaatgttaaaacatcgtagagaacatattaaaacaagtgcactagaatt 45133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 33961797 - 33961619
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||||||||||| |||| ||||    
T  33961797 ggtagcccccagagtaggtgagtttgttaccgaactgggtcaacaaactcacagtgttctttactttcttgtcatttattttcttgttttgatttctgtt 33961698  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgct 198  Q
    |||||||||| ||||||||||| || ||||  || | |||||| ||||||| |||| |||  |||||||||||||||||    
T  33961697 tatttcgtgatgttggaacatttaagggaacgttataaacgttgaaacatcttacagaactaattaaaacaagtgcgct 33961619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 24091993 - 24091824
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||               |||||||||||||||||| ||||    
T  24091993 ggtagcccctagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttcttt---------------actttcttgtttttatttctgtt 24091909  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||||||||| ||||||||||||||| ||| ||| | |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  24091908 tatttcgtgatgttggaacattgaacagaacattataaacgttgaaacatcttacagaacatattaaaacaagtgcgctagaatt 24091824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 25240441 - 25240257
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||   ||||||||||||||||||||||||||| |||||||||| |||    ||| ||||| ||||||||| || ||||||||||||| ||||    
T  25240441 ggtagcccccttggtaggtgtgtttgtcaccgaactgggtaaacaaactcaatgtaccttttactttcttgtcatttatttccttgtttttatttttgtt 25240342  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || |||||||  |||||||||||||||||| ||| | | |||| |||||||  ||||||||||||||||||||| ||||||||||    
T  25240341 tacttcgtgatattggaacattgaacggaacattataaccgttgaaacatcgcacataacatattaaaacaagtacgctagaatt 25240257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 22485174 - 22485089
Alignment:
Q  25 cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgttttt 110  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  22485174 cccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgttttt 22485089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 22472798 - 22472634
Alignment:
Q  42 tttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttat--ttatgtttatttcgtgacgttggaaca 139  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||||| |  || |||||||   |||| |||| ||||    
T  22472798 tttgtcaccgaactgggtcaacatactcattgtgttctttactttcatgtcttttattttcttgtttttttaattctgtttatcgtgtgatgttgaaaca 22472699  T
Q  140 ttgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || | || || || |  ||||||||||||||||||| ||| ||||||||||||||  ||||||||    
T  22472698 ttaatcgtaacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtcctagaatt 22472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 9996527 - 9996487
Alignment:
Q  28 ccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  9996527 ccagagtaggtgtgtttgtcaccgaactgggttaacaaact 9996487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 20255006 - 20255054
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  20255006 ggtagcccccatagtacatgtgtttgtcaccgaactgggtcaacaaact 20255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 1562490 - 1562537
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  1562490 ggtagcccccaaagtaggtgtgtttgtcgccgaactgggttaacaaac 1562537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 12240274 - 12240228
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||    
T  12240274 ggtagcctccggagtaggtgtgtttgtcaccgaactgggttaacaaa 12240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 12814715 - 12814760
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||    
T  12814715 ggtagcccccagagtaggtgtgtttgtcaccaaattgggttaacaa 12814760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 22480973 - 22481020
Alignment:
Q  157 aacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||||||    
T  22480973 aacgttaaaatatcatacaaaacatattaaaacaagtgttctagaatt 22481020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 24384597 - 24384564
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaa 53  Q
    |||||||||||||||| |||||||||||||||||    
T  24384597 ggtagcccccagagtacgtgtgtttgtcaccgaa 24384564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 32513492 - 32513549
Alignment:
Q  207 agatcgggctttggtcgcatcttgcgcaacaacaatgacgacatgttacttgggttct 264  Q
    ||||||||||||||   ||||||||| |||||||||| ||||  ||||||||||||||    
T  32513492 agatcgggctttggggacatcttgcgtaacaacaatggcgactagttacttgggttct 32513549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 7e-62; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 16208004 - 16208188
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||| ||||||| ||| |||||||||||||||||    
T  16208004 ggtagcccccagagtaggtgtgtttgtcgccgaaatgggtcaacaaactcattgtcttctttactttcctatcatttattttattgtttttatttatgtt 16208103  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| ||||| |||||||||||||||| || |||   || ||||||||||||||||||||||||||||||||||| |||||||||    
T  16208104 tattgcgtgatgttggaacattgaacgaaacattacaaatgttaaaacatcatacataacatattaaaacaagtgtgctagaatt 16208188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 4458775 - 4458591
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  4458775 ggtagcccccagagtaggtgtgtttgtcaccgaactcggtcaacaaattcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtt 4458676  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    | || || || ||||||||||| ||||||| ||||  ||||||||||||||  ||| |||||||||||||||||||||| |||||    
T  4458675 tgttacgcgatgttggaacattaaacggaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctcgaatt 4458591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 11998902 - 11998731
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||| |||||||  ||||| ||    
T  11998902 gtaggtgtgtttgtcatcgaactgggtcaacaaactcattgtgttctttactttcctgtcgtttattttcttgtttttgtttctgtttatcacgtgatgt 11998803  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||| ||||||| ||||  ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11998802 tggaacattaaacggaacattgcaaacgttaaaacatctgacataacatattaaaacaagtgcgctagaatt 11998731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 16436810 - 16436626
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  16436810 ggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtgttctttactttcttgtcatttactttcatgtttttatttctgtt 16436711  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || ||||||| ||||||| | ||||||||| ||| | |||||| ||||||| |||| ||||| ||||||||| | ||||||||||    
T  16436710 taattcgtgatgttggaaaaatgaacggaacattataaacgttgaaacatcttacagaacattttaaaacaattacgctagaatt 16436626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 12325848 - 12325677
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| ||| ||| ||    
T  12325848 gtaggtgtgtttgtcaccgaactaagtcaacaaactcattttgttctttactttccagtcatttactttcttgtttttatttctgtttacttcatgatgt 12325749  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||||||||| ||||  || |||||||||||||||| ||||| |||||||||||||  |||||||    
T  12325748 tggaacattgaacggaacattgcaaatgttaaaacatcatacagaacatcttaaaacaagtgcattagaatt 12325677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 20991578 - 20991455
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgt-ttttatttatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  20991578 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgttttttatttatgt 20991479  T
Q  119 ttatttcgtgacgttggaacattg 142  Q
    ||| ||||||| ||||||||||||    
T  20991478 ttacttcgtgatgttggaacattg 20991455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 11521533 - 11521716
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||  |||    
T  11521533 ggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttatttactttcctgtcatttactttcttg-ttttatttcagtt 11521631  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| |||||| | || || ||||  |||| |  ||||||||| ||||| ||||||||||||||||||||||||    
T  11521632 tatcacgtgatgttgaaacattaatcgtaacattgcaaacgctgtaacatcatatataacttattaaaacaagtgcgctagaatt 11521716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 645168 - 644985
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttt 120  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| |||||    
T  645168 gtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaattcattgtgttatttactttcctgtcatttattttcttgtttttatttctgttt 645069  T
Q  121 atttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||  ||||| |||| ||||||    | || ||||  |||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  645068 atcgcgtgatgttgaaacattagttgtaacattgcaaacgattaaacatcatacagaacgtattaaaacaagtgcgctagaatt 644985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 29546288 - 29546436
Alignment:
Q  55 tgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattg 154  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||||| ||||||||| |||| ||||||||||||||||||| |||     
T  29546288 tgggtcaacaaactcactgtgttctttactttcttgtcatttatttttttgtttttatttctgtttattttgtgatgttggaacattgaacggaacatta 29546387  T
Q  155 ttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    | |||||| ||||||| |||| ||||||||||||||| || |||||||||    
T  29546388 taaacgttgaaacatcttaca-aacatattaaaacaaatgtgctagaatt 29546436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 13455235 - 13455418
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||   ||| ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| | ||||||||||| || ||||    
T  13455235 ggtagcccccagagtaggtgacgttg-caccgaactaggttaacaaactcattgtgttctttactttcttgtcatttattctcttgtttttagttctgtt 13455333  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| ||||||||||| |||| || || |  ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  13455334 tataacgtgatgttggaacatttaacgtaacatcgaaaacgttaaaacatcatacagaacatattaaaacaaatttgctagaatt 13455418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 11588500 - 11588316
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgt 118  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||| ||||  |||||| ||||||||| |||    
T  11588500 ggtagccgctagagtaggtgtgtttgtcaccgagctgggtcaacaaactcactgtgttctttacttt-ctgtcttttatttttcttatttttatttctgt 11588402  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || || | ||| |||| |||||| | || || ||||  |||||   ||||||||||||||||||||||||||||||||||||||||    
T  11588401 ttgttgcatgatgttgaaacattaatcgtaacattgcaaacgtcgtaacatcatacataacatattaaaacaagtgcgctagaatt 11588316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 10279845 - 10279722
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgtt-cttttctttcctgtcatttactttcttgtttttatttatgtttattt 124  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||| |||||| ||    
T  10279845 ccccagagtaggtgtgtttgtcgccgaactaggtcaacaaactcattgtgttcctttactttcttgtcatttactttcttg-ttttatttctgtttaatt 10279747  T
Q  125 cgtgacgttggaacattgaacggaa 149  Q
    ||||| ||||||| |||||||||||    
T  10279746 cgtgatgttggaagattgaacggaa 10279722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 14165186 - 14165100
Alignment:
Q  35 aggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttat 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||    
T  14165186 aggtgtgtttgtcaccgaactggatcaacaaactcattgtgttatttactttcctgtcatttactttcttg-ttttatttctgtttat 14165100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 26133039 - 26133114
Alignment:
Q  22 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta 97  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||| ||||| |||||||||    
T  26133039 tagcccccagagtaggtgtctttgtcaccgaactgggttaacaaactcattgtgtcttttactttcttgtcattta 26133114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 20925232 - 20925286
Alignment:
Q  32 agtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 86  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  20925232 agtaggtgtgtttatcaccgaactgggtcaacaaactcattgtgttctttacttt 20925286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21260551 - 21260503
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21260551 ggtagcccccagagtaggtgtgtttgtcaccgaactggatcaacaaact 21260503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 14926683 - 14926596
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtt 107  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||  |||||   |||  |||| |||||||||||||||||||    
T  14926683 ggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccatttaatttcttgtcatttactttcttgtt 14926596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 15350149 - 15350062
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtt 107  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||  |||||   |||  |||| |||||||||||||||||||    
T  15350149 ggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccatttaatttcttgtcatttactttcttgtt 15350062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 20596947 - 20596993
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  20596947 ggtagcccccagagtaggtgtgtttgtcaccgaactcggttaacaaa 20596993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 23057242 - 23057196
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  23057242 ggtagccctcagagtaggtgtgtttgtcaccgaactgggttaacaaa 23057196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 24902142 - 24902059
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    ||||||||| | | |||||||||||||||| |||||||||||||||||||  ||||   ||| ||||| |||||||||||||||||    
T  24902142 ggtagcccctataataggtgtgtttgtcactgaactgggtcaacaaactc--tgtgccttttactttcttgtcatttactttcttg 24902059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7586658 - 7586698
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  7586658 ccccagagtaggtatgtttgtcaccgaactgggtcaacaaa 7586698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 10658419 - 10658371
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  10658419 ggtagcctccagagtaggtgtgtttgtcacggaactgggttaacaaact 10658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 31269177 - 31269224
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  31269177 ggtagcccccggagtaggtgagtttgtcaccgaactgggttaacaaac 31269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 10038864 - 10038902
Alignment:
Q  27 cccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  10038864 cccagagtaggtgtgtttgtcaccgaactgggttaacaa 10038902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11407072 - 11407118
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||    
T  11407072 ggtagcccccagagtaggtgtgtttgtcatctaactgggttaacaaa 11407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 10251476 - 10251431
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||    
T  10251476 ggtagcctccagagtaggtgtgtttatcaccgaactgggttaacaa 10251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 10279712 - 10279621
Alignment:
Q  78 cttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatc 170  Q
    |||| ||||| ||||||||||||||||| |||| ||| | |||| ||||||| ||||||| |||||||||||  || | |||||| |||||||    
T  10279712 ctttactttcttgtcatttactttcttg-ttttgtttctatttaattcgtgatgttggaagattgaacggaactttataaacgttgaaacatc 10279621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 42636283 - 42636235
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| ||||||||||| |||||||||||||||| ||| ||||||||    
T  42636283 ggtagcctccagagtaggtatgtttgtcaccgaacttggttaacaaact 42636235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 10309612 - 10309650
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactggg 58  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  10309612 ggtagcccccagagtaggtgcgtttgtcactgaactggg 10309650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 7508471 - 7508426
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||| | ||||||||||||||||| |||||||||| |||||    
T  7508471 ggtagccccaaaagtaggtgtgtttgtcatcgaactgggttaacaa 7508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 9894189 - 9894226
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgg 57  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  9894189 ggtagtccccagagtaggtgtgtttgtcaccaaactgg 9894226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 14687403 - 14687358
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  14687403 ggtagcctccatagtaggtgtgtttgtcaccgaactaggttaacaa 14687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 23296536 - 23296499
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgg 57  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  23296536 ggtagcctccaaagtaggtgtgtttgtcaccgaactgg 23296499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 23580076 - 23580121
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||||    
T  23580076 ggtaacccccatagtaggtgtgttagtcaccgaactgggttaacaa 23580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 23956901 - 23956864
Alignment:
Q  32 agtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23956901 agtagatgtgtttgtcaccgaactaggtcaacaaactc 23956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 7e-62; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 11667985 - 11668168
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||| | ||||||| |||||||||||||||||||||    
T  11667985 ggtagcccccagagtaggtgtgtttctcatcgaactgggtcaacaaactcactgtgttctttactttcttttcatttattttcttgtttttatttatgtt 11668084  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||||  ||| ||||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  11668085 tattttttgatgttggaacattgaacggaacattgtaaacgttgaaacatcttaca-aacatattaaaacaagtgcgctagaatt 11668168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 4246071 - 4245890
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |    
T  4246071 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttctgct 4245972  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctaga 201  Q
    |||  ||||| |||| |||||| | |  || ||||  ||||| |||||||||||||||||||||||||||||||| ||||||    
T  4245971 tatcgcgtgatgttgaaacattaatcataacattgcaaacgtcaaaacatcatacataacatattaaaacaagtgtgctaga 4245890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 26972523 - 26972706
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| |||| |||||||||||||||  ||||    
T  26972523 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttaattacctgtcttttattttcttgtttttattactgtt 26972622  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  |  || |||| |||||| | || || || |  ||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  26972623 tatcgccggatgttgaaacattaatcgtaacatcg-aaacgttgtaacatcatacagaacatattaaaacaagtgcgctagaatt 26972706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 1973349 - 1973163
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||  |||| |||||||||||||||||||||||||| || |    
T  1973349 ggtatcccccagagtaggagtgtttgtcaccgaactgggtcaacaaactcaccatgttctttattttcttgtcatttactttcttgtttttatttctg-t 1973251  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattaca 207  Q
    || |||| || |||||||||||||| |||| ||| | ||| || || |||| |||| ||||| |||||| |||| |||||||||||||    
T  1973250 taattcgcgatgttggaacattgaatggaacattataaacattgaagcatcttacaaaacattttaaaataagtacgctagaattaca 1973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 20859665 - 20859791
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||||||||| ||  |||    
T  20859665 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaaatcattgtgttctttactttcttgtcgtttattttcttgtttttactttcgtt 20859764  T
Q  120 tatttcgtgacgttggaacattgaacg 146  Q
    |||  ||||| |||| |||||||||||    
T  20859765 tatcgcgtgatgttgaaacattgaacg 20859791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 14745905 - 14746080
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||| ||| ||||||||||||||| |||||||||||| ||| ||||    
T  14745905 ggtagcccccagagttggtgtgtttgtcaccgagctgggtcaacaaactcgctgtgttatttactttcctgtcatttattttcttgtttttgtttctgtt 14746004  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgc 195  Q
    |||  |||||  ||| |||||| | |  || ||||  |||  |||||||||||||||||| | |||||||||||||    
T  14746005 tatcgcgtgatattgaaacattaatcttaacattgcaaacactaaaacatcatacataacctcttaaaacaagtgc 14746080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 13165414 - 13165249
Alignment:
Q  39 gtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaac 138  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||| || |||| ||||||||||||| || |||||||  ||||| |||| |||    
T  13165414 gtgtttgtcaccgaactgagtcaacaaacttattgtgttctttactttcctatcttttattttcttgtttttaattctgtttatcgcgtgatgttgtaac 13165315  T
Q  139 attgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||| | |  || || |  ||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  13165314 attaatcataacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtgctagaatt 13165249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 9452113 - 9451993
Alignment:
Q  83 ctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacata 182  Q
    ||||||||||||||| |||||||||||||||| || ||||  ||||| ||||||||||| | || || ||||  ||||||||||||||||| | |||||     
T  9452113 ctttcctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat- 9452015  T
Q  183 ttaaaacaagtgcgctagaatt 204  Q
    ||||||||||||||||||||||    
T  9452014 ttaaaacaagtgcgctagaatt 9451993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 17851496 - 17851577
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttc 102  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| | ||||| ||||||||| ||||    
T  17851496 gtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctatactttcttgtcatttattttc 17851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 20841399 - 20841513
Alignment:
Q  32 agtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacg 131  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| ||||| |||  |||| ||| ||||||||| || |||||||  ||||| |    
T  20841399 agtaggtgtgtttgtcaccgaactatttcaacaaactcattgtgttctttactttcttgttgtttatttttttgtttttacttttgtttatcgcgtgatg 20841498  T
Q  132 ttggaacattgaacg 146  Q
    ||  |||||||||||    
T  20841499 ttaaaacattgaacg 20841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 23478057 - 23478151
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatt 113  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||   ||| ||||| |||||||||  |||||||||||||||    
T  23478057 ggtagcccccagagtaggtgtgtttgtcactgaactaggtcaacaaactcactgtgccatttactttcttgtcatttatttttcttgtttttatt 23478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 41330925 - 41331009
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||   ||| | ||| ||||||||| |||||||    
T  41330925 gtagcccccaaagtaggtgtgtttgtcaccgaactgggtcaacaaactctttgtgccttttacattcttgtcatttattttcttg 41331009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 18390227 - 18390273
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18390227 ggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaaa 18390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 17355953 - 17355998
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  17355953 ggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17355998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 17379745 - 17379790
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  17379745 ggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17379790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 15804233 - 15804282
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  15804233 ggtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaactc 15804282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 10340280 - 10340364
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||   ||||   ||| |||||||||| |||| |||||||    
T  10340280 gtagcccccagagtaggtgtacttgttaccgaactgggtcaacaaactttctgtgccttttactttcctgtcttttattttcttg 10340364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 12753097 - 12753049
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  12753097 ggtagcctccagagtaggtgtgtttctcaccgaactgggttaacaaact 12753049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 18379856 - 18379899
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    |||||| || ||||||||||||||||||||||||||| ||||||    
T  18379856 agcccctagtgtaggtgtgtttgtcaccgaactgggttaacaaa 18379899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 20841526 - 20841560
Alignment:
Q  170 catacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||||||||||||||||||| |||||||    
T  20841526 catacataacatattaaaacaagtgcgttagaatt 20841560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 51472215 - 51472260
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||||||||||||| ||||||||||||| ||| ||||| |||||    
T  51472215 ggtagcccccagagtatgtgtgtttgtcactgaattgggttaacaa 51472260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 110; Significance: 3e-55; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 18255 - 18437
Alignment:
Q  25 cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttattt 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||| ||||||||| |||||||||||||||| ||||||  |    
T  18255 cccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactatgttctttactttcttgtcatttattttcttgtttttatttttgttta--t 18352  T
Q  125 cgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 209  Q
    ||||| |||||||| |||||||| | ||||  |||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  18353 cgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaaaacaagtgcgctagaatttcaga 18437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 27649 - 27831
Alignment:
Q  25 cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttattt 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||| ||||||||| |||||||||||||||| ||||||  |    
T  27649 cccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactatgttctttactttcttgtcatttattttcttgtttttatttttgttta--t 27746  T
Q  125 cgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 209  Q
    ||||| |||||||| |||||||| | ||||  |||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  27747 cgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaaaacaagtgcgctagaatttcaga 27831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 7663 - 7847
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||| ||||| |||||||||||||||| ||||    
T  7663 ggtagcccctagagtaagtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcttgtaatttattttcttgtttttatttctgtt 7762  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||| ||||||  ||||||||||||||   | ||||  ||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  7763 tatctcgtgatattggaacattgaacatgacattgcaaacgttaaatcatcttacagaacatattaaaacaagtgcgctagaatt 7847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 295496 - 295312
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| |||||||||||||||  ||||    
T  295496 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttctttactttcttgtcaattattttcttgtttttattcctgtt 295397  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||| || ||| ||||||||||||||| ||| | ||| || ||||||| |||| ||||||||| |||||||||| |||||||    
T  295396 tatttcgagatgttagaacattgaacggaacattataaacattgaaacatcttacagaacatattagaacaagtgcgttagaatt 295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 44452503 - 44452327
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| | |||||  ||||| ||    
T  44452503 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcgtttattttcttgtttttatttctttttatcacgtgatgt 44452404  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 209  Q
    ||||||||| |||| || ||||  ||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  44452403 tggaacattaaacgaaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctagaatttcaga 44452327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 28051172 - 28051011
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  28051172 ggtagcccccagagtaggtgtgtttgtcaccaaactgggtcaacaaactcaccgtgttctttactttcttgtcatttactttcttgtttttatttctgtt 28051073  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacat 181  Q
    || ||||||| ||||||||||||||||||| ||| | |||||| ||| ||| |||| |||||    
T  28051072 taattcgtgatgttggaacattgaacggaacattataaacgttgaaatatcttacagaacat 28051011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 47 - 204
Target Start/End: Original strand, 20748312 - 20748469
Alignment:
Q  47 caccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 146  Q
    ||||||||||||| |||||||||||| |||||||| ||||| ||||||||| |||||||||||||||| |||||||  ||||| ||||||||||||||||    
T  20748312 caccgaactgggttaacaaactcattatgttctttactttcttgtcatttattttcttgtttttatttctgtttatcgcgtgatgttggaacattgaacg 20748411  T
Q  147 gaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     || || |  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20748412 taacatcgcaaacgttaaaacatcatacaaaacatattaaaacaagtgcgctagaatt 20748469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 13790715 - 13790531
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||| ||||    
T  13790715 ggtagcccccatagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcatgtcttttattttcttgtttttatttctgtt 13790616  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| |||||| | || || ||||  ||||    ||||||||||| |||||||||||||||||| |||||||||    
T  13790615 tatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgtgctagaatt 13790531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 15635996 - 15636180
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| ||||    
T  15635996 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcatcaaactcattgtgttctttactttcatgttatttattttcttgtttttatttctgtt 15636095  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| |||||| | || |  ||||  |||| |||||||||| ||| ||| |||||||||||||| |||||||||    
T  15636096 tatcgcgtgatgttgaaacattaatcgtagcattgaaaacgctaaaacatcaaacagaacgtattaaaacaagtgtgctagaatt 15636180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 1919364 - 1919542
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttc 125  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||  |    
T  1919364 ccccatagtaggtgtgtttgtcatggaactgggtcaacaaactcattgtgttatttactttcctgtcatttactttcttgtttttatttctgtttatcgc 1919463  T
Q  126 gtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| |||| |||||| |  | || ||||  ||||   ||||| |||||| ||| ||||||||||||||||||||||||    
T  1919464 gtgatgttgaaacattaattgtaacattgcaaacgcggaaacaacatacagaacgtattaaaacaagtgcgctagaatt 1919542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 19532006 - 19532188
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| || | || |||||||||||||||| ||||    
T  19532006 ggtagcccccaaagtaggtgtgtttgtcaccgaattggatcaacaaactcattgtgttctttactttcctttcttgtattttcttgtttttatttctgtt 19532105  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaa 202  Q
    |||  ||||| |||| |||||||| || || ||||  |||| |  ||||||||| | |||||||||||||||||| |||||||    
T  19532106 tatcgcgtgatgttgaaacattgatcgtaacattgaaaacgctgtaacatcatatagaacatattaaaacaagtgtgctagaa 19532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 19633913 - 19633739
Alignment:
Q  30 agagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtga 129  Q
    ||||||| |||||||||| | ||||| |||||||||||||| |||||| ||| ||||| ||||| ||| |||||||||||||||| |||||||  | |||    
T  19633913 agagtagatgtgtttgtcgctgaactaggtcaacaaactcactgtgttatttactttcttgtcaattattttcttgtttttatttctgtttatcgcatga 19633814  T
Q  130 cgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     |||||||||||||||| || ||||  |||||||||||||||| || ||||||||||||||||| ||||||||||    
T  19633813 tgttggaacattgaacgtaacattgcaaacgttaaaacatcatgcaaaacatattaaaacaagtacgctagaatt 19633739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 18035018 - 18035203
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||| ||||||| |||||||||||||||| ||||    
T  18035018 ggtagcctcaagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttactttcctctcatttattttcttgtttttatttttgtt 18035117  T
Q  120 -tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     ||  |||||| |||| ||  || || |||| | |   |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  18035118 ataactcgtgatgttgaaaacttaaatggaacactacaaacgtttaaacatcgtacaaaacatattaaaacaagtgcgctagaatt 18035203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 17702442 - 17702340
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||| |||||||||||||||| ||||    
T  17702442 ggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttacttttcagtcttttattttcttgtttttatttctgtt 17702343  T
Q  120 tat 122  Q
    |||    
T  17702342 tat 17702340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 18064328 - 18064515
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||||||| |||||| ||||||||| ||||    
T  18064328 ggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttactttcctgtcatttattttcttatttttatttctgtt 18064427  T
Q  120 -tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataac--atattaaaacaagtgcgctagaatt 204  Q
     ||  |||||| |||| || ||| ||| ||| | |   |||||| ||||||| ||||||||  ||||||||||||||||||| |||||    
T  18064428 ataactcgtgatgttgaaatattaaacagaacactacaaacgtttaaacatcgtacataacatatattaaaacaagtgcgcttgaatt 18064515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 24195554 - 24195459
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttta 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||| ||||||    
T  24195554 ccccagagtaggtgtgtttttcaccgaactgggtcaacaaactcattgtgttctttacattcctgtcttttattttcttgtttttatttctgttta 24195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 18547684 - 18547593
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgttttta 111  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||| ||| |||||||||    
T  18547684 ggtagcccccagagtaggtgtgtttgtcaccgaattgggtcaacaaactcattgtattctctactttcctgtcatttattttgttgttttta 18547593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 13524804 - 13524925
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||| |||  |||| ||||||||||| | |||||||    
T  13524804 ggtagcccccagagtaggtgt-tttgtgaccgaactgggtcaacaaactcattttgttctttactttcttgttgtttattttcttgttttgacttatgtt 13524902  T
Q  120 tatttcgtgacgttggaacattg 142  Q
    |||  ||||| |||| |||||||    
T  13524903 tatcgcgtgatgttgaaacattg 13524925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 23954680 - 23954802
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | |||| |||| ||||||| |||||||||||||    
T  23954680 ggtagcctccagagtaggtgtgtttgccaccgaactggatcaacaaactcattgtattctttacttacatgtcttttattttcttgttttttatttatgt 23954779  T
Q  119 ttatttcgtgacgttggaacatt 141  Q
    ||||| | ||| |||| ||||||    
T  23954780 ttattgcatgatgttgaaacatt 23954802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 15686280 - 15686329
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15686280 ggtagcccctagagtaggtgtgtttgtcatcgaactgggtcaacaaactc 15686329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 17140434 - 17140531
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgtttat 122  Q
    ||||| |||||||| ||||| | ||||| |||||||||||| ||||| |||||||| |||||||| | ||||  ||||||||||| ||||||||||||    
T  17140434 ccccatagtaggtgagtttgacgccgaattgggtcaacaaattcattatgttctttactttcctggcttttatttttcttgttttgatttatgtttat 17140531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 6580989 - 6581037
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  6580989 ggtagccttcagagtaggtgtgtttgtcaccgaactgggttaacaaact 6581037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 14406752 - 14406799
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    |||||||| || |||||||||||||||||||||||||||| |||||||    
T  14406752 ggtagcccacaaagtaggtgtgtttgtcaccgaactgggttaacaaac 14406799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 17702298 - 17702259
Alignment:
Q  165 aacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17702298 aacatcatacataacttattaaaacaagtgcgctagaatt 17702259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 15686451 - 15686417
Alignment:
Q  35 aggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    |||||||||||||||||||||||||||||||||||    
T  15686451 aggtgtgtttgtcaccgaactgggtcaacaaactc 15686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 17042876 - 17042924
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| ||||||||||||||||||||||| |||||| | ||||||||    
T  17042876 ggtagcctccagagtaggtgtgtttgtcaccaaactggtttaacaaact 17042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 9031504 - 9031558
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 75  Q
    ||||||||||||||||||||   ||| ||||||||||||| |||||||||||||||    
T  9031504 ggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactcattgtg 9031558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 31649720 - 31649690
Alignment:
Q  27 cccagagtaggtgtgtttgtcaccgaactgg 57  Q
    |||||||||||||||||||||||||||||||    
T  31649720 cccagagtaggtgtgtttgtcaccgaactgg 31649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 3552336 - 3552373
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgg 57  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  3552336 ggtagccccaagagtaggtgcgtttgtcaccgaactgg 3552373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 13913827 - 13913739
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttt 109  Q
    ||||||||||||||||||||   ||| |||||||| |||| |||||||||  |||||| ||| ||||| |||| |||| ||| |||||||    
T  13913827 ggtagcccccagagtaggtgacgttg-caccgaaccgggttaacaaactctctgtgttttttactttcttgtcttttattttgttgtttt 13913739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 10724294 - 10724111
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttt 120  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||  |||| ||||||||| |||||||||||||||| |||||    
T  10724294 gtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtattctttaatttcttgtcatttattttcttgtttttatttctgttt 10724195  T
Q  121 atttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| |||| ||||||||||||||||||| |||   |||| ||||||||| |||| |||||||||||||||||||| |||||||    
T  10724194 attttgtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaaacaagtgcgttagaatt 10724111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 10938063 - 10937880
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttt 120  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||  |||| ||||||||| |||||||||||||||| |||||    
T  10938063 gtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtattctttaatttcttgtcatttattttcttgtttttatttctgttt 10937964  T
Q  121 atttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||| |||| ||||||||||||||||||| |||   |||| ||||||||| |||| |||||||||||||||||||| |||||||    
T  10937963 attttgtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaaacaagtgcgttagaatt 10937880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 10190922 - 10190738
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||    
T  10190922 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgttttctttactttcctgtcatttattttcttgtttttatttttgtt 10190823  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  | ||| |||| |||||| | |  || ||||  || | | |||||||||||| ||||||||||||||||||||||||||||    
T  10190822 tatcgcttgatgttgaaacattaatcttaacattgcaaatgctgaaacatcatacagaacatattaaaacaagtgcgctagaatt 10190738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 8163791 - 8163634
Alignment:
Q  47 caccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 146  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| |||||||  ||||| ||||||||||||||||    
T  8163791 caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttttgtttatcgcgtgatgttggaacattgaacg 8163692  T
Q  147 gaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
     || ||  | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8163691 taacatcataaacgttaaaacatcatacataacgtattaaaacaagtgcgctagaatt 8163634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 25116858 - 25116675
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttt 120  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| |||||| ||||||||| |||||    
T  25116858 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaataaactcattgtgttctttactttcctgtcgtttattttcttatttttatttctgttt 25116759  T
Q  121 atttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||  ||||| |||| |||||| | || || ||||| || | | |||||| ||||| ||| |||||||||||||| |||||||||    
T  25116758 atcgcgtgatgttgaaacattaatcgtaacattgtaaatgctgaaacattatacagaacgtattaaaacaagtgtgctagaatt 25116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 204
Target Start/End: Complemental strand, 16383923 - 16383741
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgt-ttttatttatgttta 121  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||| |||||||| |||||||| ||||||    
T  16383923 agcccccagagtaggtgtgtttgtcaccgaactaggtcaacaatctcattgtgttctttaatttcctgtcttttattttcttgttttttatttctgttta 16383824  T
Q  122 tttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |  ||||| |||| |||||| | || || |||   ||||  | |||||| |||| ||||||||||||||||||||||||||||    
T  16383823 tcgcgtgatgttgaaacattaatcgtaacattacaaacgccataacatcttacagaacatattaaaacaagtgcgctagaatt 16383741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 15162614 - 15162795
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttat 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||| |||||||| |||||| |||||||||||||||| ||||||     
T  15162614 agcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaacttattgtgtcttttactttcctgccatttattttcttgtttttatttctgtttac 15162713  T
Q  123 ttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
        ||| ||||||||||| | || || || |  |||||| ||||||| ||||||||||||||||||||||  |||||||||    
T  15162714 actatgatgttggaacattaatcgaaacatcgcaaacgttgaaacatcttacataacatattaaaacaagtatgctagaatt 15162795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 21478143 - 21477960
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||| ||||||||||||   ||| ||||||||||||| ||||||||||  ||||||||| ||||| ||||||||| |||||||||||||||| || |    
T  21478143 ggtagcctccagagtaggtgacgttg-caccgaactgggttaacaaactcaccgtgttctttactttcttgtcatttattttcttgtttttatttctggt 21478045  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||||||||||||| |  | ||    ||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  21478044 tatcgcgtgatgttggaacattgaatgtgacatcacaaacattaaaacatcatacagaacgtattaaaacaagtgcgctagaatt 21477960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 33899112 - 33899189
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta 97  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33899112 ggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcattta 33899189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 28019340 - 28019259
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttacttt 101  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  28019340 ggtagcccccagagcatgtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttcctgtcatttacttt 28019259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 15700434 - 15700604
Alignment:
Q  20 ggtagccccca-gagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgt 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||               ||||||||||||||||||||| |||    
T  15700434 ggtagcccccaagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttc---------------tttactttcttgtttttatttctgt 15700518  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||| ||||||| |||||||||||||||  || ||| | ||| || ||||||| |||| ||||| |||||||||||  |||||||||    
T  15700519 ttaattcgtgatgttggaacattgaacaaaacattataaacattgaaacatcttacaaaacattttaaaacaagtatgctagaatt 15700604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 23400326 - 23400412
Alignment:
Q  34 taggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||  |||||||||||||||||||||    
T  23400326 taggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttactttcatgtcttttatttttcttgtttttatttatgtt 23400412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 18618240 - 18618422
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgt 118  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||||||| | |||||||| ||||| |||| ||||  |||||||||| ||||  ||     
T  18618240 ggtagcccccagagtaggtatgtttgtcaccgacttggctcaacaaactcactatgttctttactttcttgtcgtttatttttcttgtttatattactgg 18618339  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacg-ttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||  ||| | |||| |||||||||| ||| |    ||||| ||||||||| | ||| |||||||||||||||||| |||||||||    
T  18618340 ttatcgcgtaatgttgaaacattgaacagaaca----taacgcttaaaacattacacagaacatattaaaacaagtgtgctagaatt 18618422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 13399427 - 13399477
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13399427 ggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 13399477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 32861683 - 32861637
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  32861683 ggtagcccctagagtaggtgtgtttgtcaccgaactggatcaacaaa 32861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 9068981 - 9068933
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  9068981 ggtagcctccagagtaggtgtgtttgttaccgaactgggttaacaaact 9068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 50907887 - 50907840
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||    
T  50907887 ggtagccctcagagtaggtgtgtttgtcaccgaactgagttaacaaac 50907840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 2679881 - 2679839
Alignment:
Q  24 gcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  2679881 gcccccagagtaggtgtgtttgtcaccgtactgggttaacaaa 2679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 26244988 - 26245034
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  26244988 ggtagcctccagagtaggtgtgtttttcaccgaactgggttaacaaa 26245034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 33738019 - 33737973
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  33738019 ggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 33737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 41785470 - 41785421
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||||||||  |||| ||||||||||||| |||||||||||||||||||    
T  41785470 ggtagcccccgtagtatgtgtgtttgtcacagaactgggtcaacaaactc 41785421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 13399576 - 13399624
Alignment:
Q  156 taacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||||||   ||||||||| ||||||||||| ||||||||||    
T  13399576 taacgttaaaacattgcacataacatcttaaaacaagtacgctagaatt 13399624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 25354759 - 25354814
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 76  Q
    ||||||||||||||||||||   ||| ||||||||||||| |||||||||| |||||    
T  25354759 ggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtgt 25354814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 33745999 - 33745951
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| ||| ||||||||| ||||||||||||||| || ||||||||    
T  33745999 ggtagcctccatagtaggtgtttttgtcaccgaactgtgttaacaaact 33745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 33899450 - 33899490
Alignment:
Q  164 aaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||||||||||| ||| |||||||||||||| |||||||||    
T  33899450 aaacatcatacagaacctattaaaacaagtgtgctagaatt 33899490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 26440 - 26256
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  26440 ggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtgttctttactttcttgtcatttactttcatgtttttatttctgtt 26341  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || ||||||| ||||||| | ||||||||| ||| | |||||| ||||||| |||| ||||| ||||||||| | ||||||||||    
T  26340 taattcgtgatgttggaaaaatgaacggaacattataaacgttgaaacatcttacagaacattttaaaacaattacgctagaatt 26256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 13735097 - 13735281
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||  ||| ||||||||||||||| |||||||||||||||| ||||    
T  13735097 ggtaacccccagagtaggtgtgtttgtcaccgaagtgggtcaacaaactcactgtgtcttttactttcctgtcatttattttcttgtttttatttctgtt 13735196  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || ||||||| ||||||||||||||||||| ||| | |||||| |||||||   || ||||||||||||||||| | ||||||||    
T  13735197 tacttcgtgatgttggaacattgaacggaacattataaacgttgaaacatctcgcagaacatattaaaacaagttcactagaatt 13735281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 30605814 - 30605995
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||| ||||||| ||||||| | |||    
T  30605814 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttctttactttcttgtctttta-tttcttgttttttatctctgt 30605912  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||| | ||||||||||||||||||| |   |||||||| ||||||| |||| |||||||||||||||||||| |||||||    
T  30605913 ttatttcgtaatgttggaacattgaacggaaca---ttaacgttgaaacatcttacagaacatattaaaacaagtgcgttagaatt 30605995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 9422604 - 9422781
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||| |||||||||||||||| |||||||   |||| ||    
T  9422604 gtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacttttctgtcgtttattttcttgtttttatttctgtttatcatgtgatgt 9422703  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    ||||||| | ||||||| ||||  || |||||||||||  ||| ||||||||||||||||||| |||||||| |||||    
T  9422704 tggaacactaaacggaacattgcaaatgttaaaacatctgacagaacatattaaaacaagtgcactagaatttcagat 9422781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 26036846 - 26036677
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| | |||| ||| ||||| ||||||||| |||||| ||||||||| ||||    
T  26036846 ggtagcccccagagtaggtgtgttttccaccgaactgggtcaacaaactcactttgttgtttactttcttgtcatttattttcttatttttatttttgtt 26036747  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaac 189  Q
    |||||||||| |||||||||| ||||| || ||| | |||||| ||||||| |||| |||||||||||||    
T  26036746 tatttcgtgatgttggaacatcgaacgaaacattataaacgttgaaacatcttacagaacatattaaaac 26036677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 22404885 - 22405069
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||| ||| ||||    
T  22404885 ggtagcccctagagcaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttcctttcatttattttcttgtttttgtttctgtt 22404984  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  | ||| |||| |||||| | || || ||||  || | | |||||||||||||||| |||||||||||||| |||||||||    
T  22404985 tatcgcatgatgttgaaacattaatcgtaacattgcaaatgctgaaacatcatacataacctattaaaacaagtgtgctagaatt 22405069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 24189898 - 24189808
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgttttt 110  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| |||| ||||||||||||    
T  24189898 ggtagcccccagagtatgtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcctgtcttttattttcttgttttt 24189808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 25105544 - 25105729
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgt 118  Q
    ||||||||| || ||||||| | ||||||||||||||||||||||| |||| ||||||||||  |||||| || ||||  |||||||||||||||| |||    
T  25105544 ggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttcctatcttttatttttcttgtttttatttctgt 25105643  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||   |||| |||| |||||| | || || ||||  ||||    ||||||||||| ||||||||||||||||||||||||||||    
T  25105644 ttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatt 25105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 25164637 - 25164822
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgt 118  Q
    ||||||||| || ||||||| | ||||||||||||||||||||||| |||| ||||||||||  |||||| || ||||  |||||||||||||||| |||    
T  25164637 ggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttcctatcttttatttttcttgtttttatttctgt 25164736  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||   |||| |||| |||||| | || || ||||  ||||    ||||||||||| ||||||||||||||||||||||||||||    
T  25164737 ttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatt 25164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 23420685 - 23420779
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttattt 114  Q
    ||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||| || || ||||||||||||||| ||||||||||||||||    
T  23420685 ggtagcccttagagtaggtgtatttgtcaccgaactgggtcagcaaactcattgtgctccttactttcctgtcatttattttcttgtttttattt 23420779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 26329337 - 26329521
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgt 118  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| | ||| |||||||||  |||||||||||||||| |||    
T  26329337 ggtagctcacagagtaggtgtgtttatcaccgaactgggtcaacaaactcactgtgtt-tttaccttcttgtcatttatttttcttgtttttatttctgt 26329435  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||| ||| ||| ||||||||||||| |  || ||| | |||||  || ||||  |   ||||||||||||||||| ||||||||||    
T  26329436 ttacttcatgatgttggaacattgagcataacattataaacgtcgaaccatctcatggaacatattaaaacaagtacgctagaatt 26329521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 18221146 - 18220971
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||  ||||||||               |||||||||||||||||| ||||    
T  18221146 ggtagaccccaaagtaggtgtgtttgtcaccgaactggatcaacaaactcatcttgttcttt---------------actttcttgtttttatttctgtt 18221062  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 210  Q
    || ||||||| ||||||||||||||||||| ||| | ||| || ||||||| |||  ||| | ||||||||||| |||||||||| |||||    
T  18221061 taattcgtgatgttggaacattgaacggaacattataaacattgaaacatcttacgaaactttttaaaacaagtacgctagaatttcagat 18220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 23623912 - 23623846
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 87  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  23623912 gtagcccccagagtaggtgtgtttgtcaccgaaataggtcaacaaactcattgtgttctttactttc 23623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 13338622 - 13338543
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 105  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||| |||| |||||||    
T  13338622 ccccagagtatgtgtgtttgtcaccgaactgggttaacaaactcactgtgttctttactttcttgtcttttattttcttg 13338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20714860 - 20714910
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 70  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  20714860 ggtagccctcagagtaggtgtgtttgtcaccgaactaggtcaacaaactca 20714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 17661534 - 17661583
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 69  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  17661534 ggtagcccccatagtaggtgtgtttgtcaccgaactgggttaacaaactc 17661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 20845918 - 20846018
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||| ||||||||   ||| ||||||||||||| |||||||||  ||||   ||| ||||||||||||||| |||||||||||||||| ||||    
T  20845918 ggtagcccccatagtaggtgacgttg-caccgaactgggttaacaaactctgtgtgccttttactttcctgtcatttattttcttgtttttatttttgtt 20846016  T
Q  120 ta 121  Q
    ||    
T  20846017 ta 20846018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 13942121 - 13942166
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||    
T  13942121 ggtagcccccagagtaggtgtgtttgtcaccgaactaggttaacaa 13942166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 24117631 - 24117586
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||    
T  24117631 ggtagccaccagagtaggcgtgtttgtcaccgaactgggttaacaa 24117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 22979775 - 22979736
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  22979775 ccccatagtaggtgtgtttgtcaccgaactgggttaacaa 22979736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 25797 - 25981
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  25797 ggtagctcccagagtaggtgtgtttgtcaccgaactgggtcaataaactcattgtgttatttactttcctgtcatttattttcttgtttttatttatgtt 25896  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| |||||| | || |  ||||  |||| | |||||||||||| ||| ||||||||||||| ||||||||||    
T  25897 tatcgcgtgatgttgaaacattaatcgtagcattgcaaacgctgaaacatcatacagaacgtattaaaacaagtacgctagaatt 25981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 17401 - 17585
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||| ||||| ||||||||| ||| ||| |||||||| ||||    
T  17401 ggtagcccccagagtaggtgtgtttgtcacgaaactgggtcaacaaactcactgtgttttttactttcttgtcatttattttattgattttatttttgtt 17500  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  |||||  ||| |||||||||| ||| ||||  |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  17501 tatcgcgtgattttgaaacattgaactgaacattgcaaacgttaaaacatcgtacagaacatactaaaacaagtgcgctagaatt 17585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 23758661 - 23758477
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||    
T  23758661 ggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtt 23758562  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| |||||| | || || ||||  |||  | |||||||||||| |||  ||||||||||||| |||||||||    
T  23758561 tatcgcgtgatgttgaaacattaatcgtaacattgcaaacactgaaacatcatacaaaactaattaaaacaagtgtgctagaatt 23758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 12910525 - 12910341
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||||    
T  12910525 ggtagcccccagagtaggtatgtttgtcaccgaactgggtcaacaaactcactgtgttctttaattttctgtcatttattttcttgtttttatttctgtt 12910426  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    |||  ||||| |||| ||| || | || || ||||  |||| | |||||||||||| ||| ||||||||||||||||||| ||||    
T  12910425 tatcgcgtgatgttgaaactttaatcgtaacattgcaaacgctgaaacatcatacagaacgtattaaaacaagtgcgctaaaatt 12910341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 22610915 - 22610744
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||  ||||| ||    
T  22610915 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtttatcgcgtgatgt 22610816  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || |||||| | || |||||||  |||     ||||||||||| |||||||||||| |||||||||||||||    
T  22610815 tgaaacattaatcgtaatattgcaaactccgtaacatcatacagaacatattaaaataagtgcgctagaatt 22610744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 24790282 - 24790403
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||     
T  24790282 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgtttttatttctgtc 24790381  T
Q  120 tatttcgtgacgttggaacatt 141  Q
    |||  ||||| |||| ||||||    
T  24790382 tatcgcgtgatgttgaaacatt 24790403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 36398918 - 36399019
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||| ||||    
T  36398918 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgcgttctttactttcctgtcgtttattttcttgtttttatttctgtt 36399017  T
Q  120 ta 121  Q
    ||    
T  36399018 ta 36399019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 21250320 - 21250407
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaact-gggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||   ||| ||||| ||||||||| || |||||    
T  21250320 ggtagcccccagagtaggtgtgtttgtcaccgaactggggtcaacaaactcactgtgccttttactttcttgtcatttatttacttgt 21250407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 19466646 - 19466696
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 70  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  19466646 ggtagcccccagagtaggtgtgtttatcaccgaactgggttaagaaactca 19466696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 22582437 - 22582363
Alignment:
Q  32 agtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttt-ctttcctgtcatttactttcttg 105  Q
    ||||||||||||||||| ||||||| ||||||||||||  |||||| |||| ||||| ||||||||| |||||||    
T  22582437 agtaggtgtgtttgtcatcgaactgagtcaacaaactctctgtgtttttttactttcttgtcatttattttcttg 22582363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 12952508 - 12952462
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 66  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  12952508 ggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 12952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 20649681 - 20649727
Alignment:
Q  21 gtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||    
T  20649681 gtagcccctagagtaggtgtgtttgtccccgaactgggttaacaaac 20649727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 21530421 - 21530331
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttt 109  Q
    ||||||||| ||||||||  |||||||||||||||||| | ||||||||| |||||   ||| ||||| |||||||||  |||||||||||    
T  21530421 ggtagcccctagagtaggcatgtttgtcaccgaactggataaacaaactcgttgtgccatttactttcttgtcatttatttttcttgtttt 21530331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 31587504 - 31587467
Alignment:
Q  28 ccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||||||||||||||||||||||||||||| |||||    
T  31587504 ccagagtaggtgtgtttgtcaccgaactgggttaacaa 31587467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24283652 - 24283688
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactg 56  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24283652 ggtagcccccagaataggtgtgtttgtcaccgaactg 24283688  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 27111110 - 27111071
Alignment:
Q  26 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  27111110 ccccagagtaggtgtgtttgtcaccgatctgggttaacaa 27111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 25347229 - 25347199
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcacc 50  Q
    |||||||||||||||||||||||||||||||    
T  25347229 ggtagcccccagagtaggtgtgtttgtcacc 25347199  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 24317933 - 24317981
Alignment:
Q  20 ggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    |||| |||||||| ||||||||||||||||||||| ||||| |||||||    
T  24317933 ggtaacccccagatgtaggtgtgtttgtcaccgaattgggttaacaaac 24317981  T

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Target: scaffold0006 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 33 - 207
Target Start/End: Complemental strand, 87758 - 87585
Alignment:
Q  33 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||| |||||||  ||||| ||    
T  87758 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcccgccatttattttcttgtttttatttctgtttatcacgtgatgt 87659  T
Q  133 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattaca 207  Q
    ||||||||| || |||| |||||  || |||| |||||  ||| ||||| ||||||||||||| |||||||||||    
T  87658 tggaacattaaatggaacattgtagacattaatacatctgacagaacat-ttaaaacaagtgcactagaattaca 87585  T

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Target: scaffold0059 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 50215 - 50400
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||| |||    
T  50215 ggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttcatgtcatttactttcttgttttttatttctgt 50314  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||  ||||| |||| |||||| | || || ||||  ||||    ||||||||||| ||| |||||||||||||| |||||||||    
T  50315 ttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccttaacatcatacagaacgtattaaaacaagtgtgctagaatt 50400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 61597 - 61781
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||| |||    
T  61597 ggtagcccccagagtaa-tgtgtttgtcaccgaactgggtcaacaaactcattgtgctatttactttcctgtcatttactttcttgttttttatttttgt 61695  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||  ||||| |||| || ||| | || || ||||  ||||    ||||||||||| ||||||||||||||| || |||||||||    
T  61696 ttatcgcgtgatgttgaaatattaatcgtaacattgcaaacgccgtaacatcatacaaaacatattaaaacaaatgtgctagaatt 61781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 110380 - 110557
Alignment:
Q  20 ggtagcccccagagtaggtgtgttt-gtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgt 118  Q
    ||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||    
T  110380 ggtagcccctagagtatgtgtgttttgtcaccgaactggttcaacaaactcattgtgttatttactttcctgtcatttactttcttgtttttatttctgt 110479  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcg 196  Q
    ||||   |||| |||| |||||| | || || ||||  | || | |||||||||||||||| ||||||||||||||||    
T  110480 ttatcgagtgatgttgaaacattaatcgtaacattgcaatcgctgaaacatcatacataacgtattaaaacaagtgcg 110557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 2484 - 2671
Alignment:
Q  22 tagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgttta 121  Q
    ||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  2484 tagcccctaaagtaggtgtgcttgtcaccgaaatgggtcaacaaactcattgtgttctttactttcctatcatttattttcttgtttttatttatgttta 2583  T
Q  122 tttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 209  Q
    |  ||| | |||| ||||||    | ||  |||  |||| ||||| |||||||||||| |||||||||||||| ||||||||| ||||    
T  2584 tcacgttaggttgaaacattagttgtaactttgcaaacgctaaaaaatcatacataacgtattaaaacaagtgtgctagaatttcaga 2671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 16748 - 16932
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtt 119  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| || |    
T  16748 ggtagcccccggagtaggtgtgtttgtcaccgaactgagtcaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttctgct 16847  T
Q  120 tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||||||||  ||| |||||| ||  | |  |||  || ||| |||||||  ||  ||||||||||||||||||||||| ||||    
T  16848 tatttcgtgatattgaaacattaaataggactttgcaaatgttgaaacatctcactgaacatattaaaacaagtgcgctaaaatt 16932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 204
Target Start/End: Original strand, 16363 - 16521
Alignment:
Q  47 caccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttat--ttatgtttatttcgtgacgttggaacattgaa 144  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||| |  || |||||||  ||||| ||||||| ||| ||    
T  16363 caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgttttttttcttctgtttatcgcgtgatgttggaa-attaaa 16461  T
Q  145 cggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || || || |  ||||||||||||||||||||||| ||||||||||||||| || |||||    
T  16462 cgtaacatcgcaaacgttaaaacatcatacataacgtattaaaacaagtgcccttgaatt 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 37041 - 36857
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg-tttttatttatgt 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | |||| ||||||| |||||| || |||    
T  37041 ggtagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgtt-tttactttcctaacttttattttcttgttttttaattttgt 36943  T
Q  119 ttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    ||||  | |||  ||| |||||| | || || ||||  |||||   ||||||||| | ||||||||||||||||||  ||||||||    
T  36942 ttatcgcatgattttgaaacattaatcgtaacattgcaaacgtcgtaacatcatatagaacatattaaaacaagtgtcctagaatt 36857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 5672 - 5496
Alignment:
Q  30 agagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg--tttttatttatgtttatttcgt 127  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||| |||  ||  ||||||||| | |||||  |||    
T  5672 agagtaggtgtgtttgacaccgaactgggtcaacaaattcattgtgttctttactttcctgtcttttattttgctgtttttttatttctatttatcgcgt 5573  T
Q  128 gacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 204  Q
    || |||| |||||| |  | || ||||  ||||    || |||||||| ||||||||||||||||||||||| ||||    
T  5572 gatgttgaaacattaattgtaacattgcaaacgccgtaatatcatacagaacatattaaaacaagtgcgctaaaatt 5496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 40370 - 40240
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttact---ttcttgtttttatttat 116  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||| | ||||||  |   ||||||||||||||| |    
T  40370 ggtagcccccagagtaggtgtgtt-gtcactgaactgggtcaacaaactcactgtgttctttactttcttatcattttttttcttcttgtttttattt-t 40273  T
Q  117 gtttatttcgtgacgttggaacattgaacggaa 149  Q
    ||||| |   ||| ||||||||||| |||||||    
T  40272 gtttactgtttgatgttggaacattaaacggaa 40240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 13643 - 13596
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 67  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||    
T  13643 ggtagcccctagagtaggtgtgtttgtcaccgaactggattaacaaac 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 5451 - 5409
Alignment:
Q  23 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  5451 agcccctagagtaggtgtgtttgtcaccgaactgggttaacaa 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 10159 - 10204
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||    
T  10159 ggtagccccaagagtaagtgtatttgtcaccgaactgggttaacaa 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 202431 - 202386
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 65  Q
    ||||||||||||||||  ||||||||||| |||||||||| |||||    
T  202431 ggtagcccccagagtacttgtgtttgtcaacgaactgggttaacaa 202386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 3158 - 3111
Alignment:
Q  20 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 68  Q
    ||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  3158 ggtagcctccagagtaggtgtg-ttgtcaccgaactggattaacaaact 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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