View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_32 (Length: 360)
Name: NF10841_low_32
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 34484634 - 34484966
Alignment:
| Q |
17 |
attatatgttttaccggtcacttggccattaacaacactactaccagagataaatttcagtgaaataatcaccaacagaaaggtgattttgcttccaatt |
116 |
Q |
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| T |
34484634 |
attatatgttttaccggtcacttggccattaacaacactactaccagagataaatttcagtgaaataatcaccaacagaaaggtgattttgcttccaatt |
34484733 |
T |
|
| Q |
117 |
gcgtaaatctcgctgaagatctgaaatgtgaatgcaatctgcatgagtgaatttagatctgtccaagacttcgaagcaagatttgtatgcaatgtaaggt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
34484734 |
gcgtaaatctcgctgaagatctgaaatgtgaatgcaatctgcatgagtgaatttagatctgtccaagacttcgaagcaagatttgtatgcaatggaaggt |
34484833 |
T |
|
| Q |
217 |
tgacagggttcaagatccaaacatgatctaagttattacagagctcccatgcttcatagctgagattaaatcgatggcttcagcacacttccatcaagga |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34484834 |
tgacagggttcaagatccaaacatgatctaagttattacagagctcccatgcttcatagctgagattaaatcgatggcttcagcacacttccatcaagga |
34484933 |
T |
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| Q |
317 |
atcaaatcttactcttcaaatcacgttcttcat |
349 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
34484934 |
atcaaatcttactcttcaaatcacgttcttcat |
34484966 |
T |
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