View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_63 (Length: 277)
Name: NF10841_low_63
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_63 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 3125510 - 3125261
Alignment:
| Q |
19 |
tgaattacaggcataattagtttttagattgatctataaacctttgcatccaaatattcaaaaaacacaacaaaagggatatactaagtgcggagagatt |
118 |
Q |
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| T |
3125510 |
tgaattacaggcataattagtttttagattgatctataaacctttgcatccaaatattcaaaaaacacaacaaaagggatatactaagtgcggagagatt |
3125411 |
T |
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| Q |
119 |
atcttgagaaattagatggtgcatatattaagtgagcctaaccaaataaaacagagaaaattctcaacgaattctccttcaagtgttattcccttaacat |
218 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |
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| T |
3125410 |
atcttgagaaattagatggtgcatatattaagcgagcctaaccaaataaaacagagaaaattgtcaacgaattctcctccaagtgttattcccttaacat |
3125311 |
T |
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| Q |
219 |
gactatgatcacccgatgctaacaaatctaaatgacccatttacctttgc |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3125310 |
gactatgatcacccgatgctaacaaatctaaatgacccatttacctttgc |
3125261 |
T |
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