View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_68 (Length: 275)
Name: NF10841_low_68
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_68 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 12 - 261
Target Start/End: Complemental strand, 22679022 - 22678773
Alignment:
| Q |
12 |
agagagaaaattttaggtaaaaataaggtgcttattatccctaaagtattaacaattcactttcttatttgtggaagcacaaatcaaagagctttatttt |
111 |
Q |
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| T |
22679022 |
agagagaaaattttaggtaaaaataaggtgcttattatccctaaagtattaacaattcactttctaatttgtggaagcacaaatcaaagagctttatttt |
22678923 |
T |
|
| Q |
112 |
ttagtgatacttccatgcctttagcaaagcaaagcacgatgaagagaatacaaacccgttagtttccatattctttcgtgaccattcaaacgtgctattt |
211 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22678922 |
ttagcgatacttccatgcctttagcaaagcaaagcacgatgaagagaatacaaacccgttagtttccatattctttcgtgaccattcaaacgtgctattt |
22678823 |
T |
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| Q |
212 |
ccctcctctcccccgaaataatcaccaactcctttgatgatggttccttc |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22678822 |
ccctcctctcccccgaaataatcaccaactcctttgatgatggttccttc |
22678773 |
T |
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