View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_69 (Length: 270)
Name: NF10841_low_69
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_69 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 11210820 - 11210599
Alignment:
| Q |
7 |
taatttagtaaaaa-cttattaaggtaataaagtataacataagataatttgtattgcttccatgtattagtagtatatatacttttgactacaaaataa |
105 |
Q |
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| T |
11210820 |
taatttagtaaaaaacttcttaaggtaataaagtataacataagataatttgtattgcttccgtgtattagta---tatatacttttgactacaaaataa |
11210724 |
T |
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| Q |
106 |
tacaaagattatcattgtgggttaacatataatgaaaatagattattttttccaggtttaatacattaatattgactacgtnnnnnnnnngttaaattga |
205 |
Q |
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| T |
11210723 |
tacaaagattatgattgtgggttaacatataatgaaaatagattattttttccaggtttaatacattaatattgactacgtaaaaaaaaagttaaattga |
11210624 |
T |
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| Q |
206 |
atattgatgagaaacatcattgaac |
230 |
Q |
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||||||||||||||||||||||||| |
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| T |
11210623 |
atattgatgagaaacatcattgaac |
11210599 |
T |
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