View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10841_low_82 (Length: 251)
Name: NF10841_low_82
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_82 |
 | |
|
| [»] chr5 (9 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] chr2 (3 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 35423629 - 35423878
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
101 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
35423629 |
gtggagcagcaaagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtgaaaatcctaacttgctgttcaagtgttgatta |
35423728 |
T |
|
| Q |
102 |
taatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35423729 |
taatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctg |
35423828 |
T |
|
| Q |
202 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35423829 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
35423878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 35376370 - 35376619
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
101 |
Q |
| |
|
|||||| |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35376370 |
gtggagcagcaaagagtttcattgcggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
35376469 |
T |
|
| Q |
102 |
taatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35376470 |
taatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctggaaaacctgttgcatggtaacgaagatcatgagtctagaaatctg |
35376569 |
T |
|
| Q |
202 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35376570 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
35376619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 35410649 - 35410880
Alignment:
| Q |
14 |
agagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaaga |
113 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35410649 |
agagtttcatggcggaatgcaatgctttaagaaagatgaggcaccgtaatcttgtcaaaatcctaacgtgttgttcaagtgttgattataatggtgaaga |
35410748 |
T |
|
| Q |
114 |
ttttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttc |
213 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||| ||||||||||||||| | ||||||| ||||||| | |||| ||||| |||||||| || |
|
|
| T |
35410749 |
gttcaaggctattgtttttgagttaatgcctaatgggaatctagaaaagtttttgcatgataacgaa------gggtctgaaaatcataatctcaacctc |
35410842 |
T |
|
| Q |
214 |
acacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
35410843 |
acacaaaggttagacattgctcttgatgtagctcatgc |
35410880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 35370208 - 35370408
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaat--gcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgat |
99 |
Q |
| |
|
|||||| |||| |||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
35370208 |
gtggagcagcaaagagtttcattgcggaatatgcaatgctttaggaaagatgaggcaccgtaatcttgtcaaaatcctaacgtgttgctcaagtgttgat |
35370307 |
T |
|
| Q |
100 |
tataatggtgaaga-ttttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaat |
198 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||||||||||||| | ||||| | |||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
35370308 |
tataatggtgaagagttccaaggctattgtttttgagttcatgcccaatgggagtttagaaaacatgttgcatggtaacgaagaacatgagtctagaaat |
35370407 |
T |
|
| Q |
199 |
c |
199 |
Q |
| |
|
| |
|
|
| T |
35370408 |
c |
35370408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 35754792 - 35755021
Alignment:
| Q |
16 |
agtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagatt |
115 |
Q |
| |
|
|||||||| | |||||||||||| || ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35754792 |
agtttcatagcggaatgcaatgcattgggaaagatgaagcaccggaatcttgtcaagattttaacttgttgttcaagtgttgattataatggtgaagatt |
35754891 |
T |
|
| Q |
116 |
ttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttcac |
215 |
Q |
| |
|
| || || |||||||||||||||||| | | ||||| ||| ||||| ||||||| | ||| ||| | ||| ||||| | |||||||| |||| |
|
|
| T |
35754892 |
tcaaagctattgtttttgagttcatgtcaaatgggagtcttgaaaagttgttgcacgataatgaa------gggtcaggaaattttaatctcaacctcac |
35754985 |
T |
|
| Q |
216 |
acaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| |
|
|
| T |
35754986 |
acaaaggttagacattgctcttgatgtagctcatgc |
35755021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 35385976 - 35386115
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
101 |
Q |
| |
|
|||||| |||| |||||||||||| |||||||||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
35385976 |
gtggagcagcaaagagtttcatggcagaatgcaatgctctgggaaagatgaagcaccagaatcttgtcaaggtcctaacctgttgttcaagtgttgatta |
35386075 |
T |
|
| Q |
102 |
taatggtgaagattttaaggccattgtttttgagttcatg |
141 |
Q |
| |
|
||| ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
35386076 |
taagggtgaagatttcaaggctattgtttttgagttcatg |
35386115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 35366863 - 35367003
Alignment:
| Q |
41 |
taggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattgtttttgagttcat |
140 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||| || ||||| ||||||||||||||||| |
|
|
| T |
35366863 |
taggaaagatgaagcaccgaaatcttgtcaagatcctaacttgttgttcaagcattgattataagggtgaagagttcaaggctattgtttttgagttcat |
35366962 |
T |
|
| Q |
141 |
gcctagtgggaatctagaaaacctgttgcatggtaacgaag |
181 |
Q |
| |
|
||||| || | ||||||||| || |||||| |||||||| |
|
|
| T |
35366963 |
gcctaagggaagtctagaaaagcttctgcatgataacgaag |
35367003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 35437049 - 35437183
Alignment:
| Q |
74 |
tcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatgg |
173 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||| ||| ||||| || |||||||| |||||||||| |||| ||||||| | ||||||| |
|
|
| T |
35437049 |
tcctaactttctgttcaagtattgattataatggtgaagttttcaaggctatagtttttgaattcatgcctatggggagtctagaaggcttgttgcacaa |
35437148 |
T |
|
| Q |
174 |
taacgaagatcatgagtctagaaatctgaatctca |
208 |
Q |
| |
|
||| ||| ||| ||||||||||||||| ||||||| |
|
|
| T |
35437149 |
taatgaacatcttgagtctagaaatctaaatctca |
35437183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 35386170 - 35386219
Alignment:
| Q |
202 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
35386170 |
aatctcaacctcacataaaggttagacattgctcttgatgtagctcatgc |
35386219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 10410210 - 10409973
Alignment:
| Q |
14 |
agagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaaga |
113 |
Q |
| |
|
|||||||| ||||||||||||| ||| | ||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10410210 |
agagtttcgtggtggaatgcaaagctctgggaaacatgaagcaccggaatcttgttaagatcctaacttgttgttcaagtgttgattataaaggtgaaga |
10410111 |
T |
|
| Q |
114 |
ttttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttc |
213 |
Q |
| |
|
||| ||||| |||||||||||||||||||||| ||||| | | |||||||| ||||||||||| |||| || ||||||||||||||||||||||||||| |
|
|
| T |
10410110 |
tttcaaggctattgtttttgagttcatgcctaatgggagtttggaaaaccttttgcatggtaataaagaacacgagtctagaaatctgaatctcaatttc |
10410011 |
T |
|
| Q |
214 |
acacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
10410010 |
acacaaaggttagacattgttctcaacgtagctcatgc |
10409973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 10415913 - 10415770
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
101 |
Q |
| |
|
|||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10415913 |
gtggagcagcaaagagtttcatggaggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
10415814 |
T |
|
| Q |
102 |
taatggtgaagattttaaggccattgtttttgagttcatgccta |
145 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
10415813 |
taatggtgaagatttcaaggctattgtttttgagttcatgccta |
10415770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 10420761 - 10420641
Alignment:
| Q |
41 |
taggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattgtttttgagttcat |
140 |
Q |
| |
|
||||||||||||| ||||| || |||||||| |||||||||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| |
|
|
| T |
10420761 |
taggaaagatgaaacaccgaaaccttgtcaagatcctaacttgttgttcaagcgttgattataagggtgaagagttcaaggctattgtttttgagttcat |
10420662 |
T |
|
| Q |
141 |
gcctagtgggaatctagaaaa |
161 |
Q |
| |
|
||||| |||| ||||||||| |
|
|
| T |
10420661 |
gcctaaggggagtctagaaaa |
10420641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 29623354 - 29623111
Alignment:
| Q |
2 |
gtggagaagcagagagtttcatggtggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgatta |
101 |
Q |
| |
|
|||||| |||| |||||||||| | ||||| || || ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29623354 |
gtggagcagcaaagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgatta |
29623255 |
T |
|
| Q |
102 |
taatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctg |
201 |
Q |
| |
|
||| ||||||||||| ||||| |||||||||||||||||||||| | || ||||||||| ||||||| | ||| |||| || ||| ||| | |
|
|
| T |
29623254 |
taaaggtgaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaag-----ga-tctggaagccat |
29623161 |
T |
|
| Q |
202 |
aatctcaatttcacacaaaggttagacattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
29623160 |
aatctcaacctcacacaaaggatagacattgctcttgatgtagctcatgc |
29623111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 30663012 - 30663229
Alignment:
| Q |
28 |
gaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattg |
127 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||||||||| || |||||||| ||||| || || ||||| |||| |
|
|
| T |
30663012 |
gaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagcgtagattataagggtgacgagttcaaggctattg |
30663111 |
T |
|
| Q |
128 |
tttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttcacacaaaggttaga |
227 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| || |||| | ||||||| |||||| ||| || ||||||| ||||||||||| | || |
|
|
| T |
30663112 |
tttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaa------gagtctggaattcataatctcagcctcacacaaagggttga |
30663205 |
T |
|
| Q |
228 |
cattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
30663206 |
cattgctcttgatgtagctcatgc |
30663229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 30671692 - 30671909
Alignment:
| Q |
28 |
gaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattg |
127 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||||||||| || |||||||| ||||| || || ||||| |||| |
|
|
| T |
30671692 |
gaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagcgtagattataagggtgacgagttcaaggctattg |
30671791 |
T |
|
| Q |
128 |
tttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttcacacaaaggttaga |
227 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| || |||| | ||||||| |||||| ||| || ||||||| ||||||||||| | || |
|
|
| T |
30671792 |
tttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaa------gagtctggaattcataatctcagcctcacacaaagggttga |
30671885 |
T |
|
| Q |
228 |
cattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
30671886 |
cattgctcttgatgtagctcatgc |
30671909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 30626061 - 30626278
Alignment:
| Q |
28 |
gaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattg |
127 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||||||||| | |||||||| ||||| || || ||||| |||| |
|
|
| T |
30626061 |
gaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagaatagattataagggtgacgagttcaaggctattg |
30626160 |
T |
|
| Q |
128 |
tttttgagttcatgcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttcacacaaaggttaga |
227 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| || |||| | ||||||| |||||| ||| || ||||||| ||||||||||| | || |
|
|
| T |
30626161 |
tttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaa------gagtctggaattcataatctcagcctcacacaaagggttga |
30626254 |
T |
|
| Q |
228 |
cattgctctcgacgtagctcatgc |
251 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
30626255 |
cattgctcttgatgtagctcatgc |
30626278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 13564620 - 13564762
Alignment:
| Q |
28 |
gaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagattttaaggccattg |
127 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||| ||| || || || ||| ||||||||| ||||| |||| ||||| ||||| ||||| |||| |
|
|
| T |
13564620 |
gaatgcaaagctttaggaaagatgaagcaccgaaatcgtgttaagattcttccttaatgttcaagtattgataataagggtgacgatttcaaggctattg |
13564719 |
T |
|
| Q |
128 |
tttttgagttcatgcctagtgggaatctagaaaacctgttgca |
170 |
Q |
| |
|
|||||||||||||| ||| ||| | ||||||||| ||||||| |
|
|
| T |
13564720 |
tttttgagttcatgtctaatggtagtctagaaaagatgttgca |
13564762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 1153787 - 1153880
Alignment:
| Q |
79 |
acttgttgttcaagtgttgattataatggtgaagattttaaggccattgtttttgagttcatgcctagtgggaatctagaaaacctgttgcatg |
172 |
Q |
| |
|
|||||||| |||||| |||||| || ||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||||| |
|
|
| T |
1153787 |
acttgttgctcaagtattgattgcaaaggtgaagatttcaaggctattgtttttgagttcatgcctaacgggagtctagaaaagatgttgcatg |
1153880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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