View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10841_low_85 (Length: 250)
Name: NF10841_low_85
Description: NF10841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10841_low_85 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 34651679 - 34651903
Alignment:
| Q |
16 |
ataataattaatgttgattcagtttcactggctccattctgaactcaccaacgtttgtaagtccctattacgtgtgaagcagttacatgcttgtcttttg |
115 |
Q |
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| T |
34651679 |
ataataattaatgctgactcagtttcactggctccattctgaactcaccaacgtttgtaagtccctattacgtgtgaagcagttacatgcttgtcttttg |
34651778 |
T |
|
| Q |
116 |
aaaacccatctctcaaaagaccctttttatgctactcaaatcattagactttatgcatttaacaatcacattaactatgcacaccacgtgttcgacaaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34651779 |
aaaacccatctctcaaaagaccctttttatgctactcaaatcattagactttatgcatttaacaatcacattaactatgcacaccacgtgttcgacaaaa |
34651878 |
T |
|
| Q |
216 |
cttccacccgaagtgttttcctttg |
240 |
Q |
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||||||||||||||||||||||||| |
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| T |
34651879 |
cttccacccgaagtgttttcctttg |
34651903 |
T |
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