View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10844_2 (Length: 416)
Name: NF10844_2
Description: NF10844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10844_2 |
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Alignment Details
Target: chr4 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 23 - 387
Target Start/End: Original strand, 35696527 - 35696891
Alignment:
| Q |
23 |
atcatcaggaacaagaaccaccgtcgcaacagcagccagaagcgttggaagtgccagagaagccaaaacggaaggagagaccgcggcgagtttctctaat |
122 |
Q |
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| T |
35696527 |
atcatcaggaacaagaaccaccgtcgcaacagcagccagaagcgttggaagtgccagagaagccaaaacggaaggagagaccgcggcgagtttctctaat |
35696626 |
T |
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| Q |
123 |
aagctgagtaaaccaagttcttctgccttagaaaaaagacctagcttctcgattgaagagagcgtgactccgaactcttcagctttggataataatcctg |
222 |
Q |
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| T |
35696627 |
aagctgagtaaaccaagttcttctgccttagaaaaaagacctagcttctcgattgaagagagcgtgactccgaactcttcagctttggataataatcctg |
35696726 |
T |
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| Q |
223 |
ctttttcaacgttgcttaatactttgcgtttctcaagtttcttgaatacgtcgacttctacttcttcgcttccttcgtagaatattcctgctccgaacca |
322 |
Q |
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| T |
35696727 |
ctttttcaacgttgcttaatactttgcgtttctcaagtttcttgaatacgtcgacttctacttcttcgcttccttcgtagaatattcctgctccgaacca |
35696826 |
T |
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| Q |
323 |
ttgtttcttccagttatcgttgtacttgttcaccttccatatccatcaacaattcaatacaaatg |
387 |
Q |
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| T |
35696827 |
ttgtttcttccagttatcattgtacttgttcaccttccatatccatcaacaattcaacacaaatg |
35696891 |
T |
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