View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10847_high_3 (Length: 240)

Name: NF10847_high_3
Description: NF10847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10847_high_3
NF10847_high_3
[»] chr5 (34 HSPs)
chr5 (18-240)||(33584767-33584987)
chr5 (148-240)||(27652241-27652333)
chr5 (148-229)||(21375572-21375653)
chr5 (149-238)||(29653435-29653524)
chr5 (148-240)||(36296054-36296146)
chr5 (148-240)||(42329466-42329558)
chr5 (148-229)||(34972572-34972653)
chr5 (148-240)||(33822423-33822515)
chr5 (148-229)||(42103985-42104066)
chr5 (153-240)||(793531-793618)
chr5 (138-229)||(39730096-39730187)
chr5 (148-229)||(26660904-26660985)
chr5 (148-229)||(26932497-26932578)
chr5 (148-229)||(42661862-42661943)
chr5 (149-240)||(4833559-4833650)
chr5 (156-228)||(14620424-14620496)
chr5 (149-229)||(42977996-42978076)
chr5 (138-229)||(2729698-2729789)
chr5 (153-236)||(15567056-15567139)
chr5 (148-190)||(36783544-36783586)
chr5 (149-238)||(32962931-32963020)
chr5 (138-190)||(4751442-4751494)
chr5 (149-229)||(8336330-8336410)
chr5 (149-229)||(27600544-27600624)
chr5 (153-233)||(34919881-34919961)
chr5 (150-229)||(34445952-34446030)
chr5 (135-190)||(36660614-36660669)
chr5 (138-190)||(4742178-4742230)
chr5 (148-190)||(166571-166613)
chr5 (148-190)||(24436462-24436504)
chr5 (148-229)||(29807236-29807317)
chr5 (153-229)||(3305936-3306012)
chr5 (138-190)||(12167522-12167574)
chr5 (153-229)||(14006042-14006118)
[»] chr2 (33 HSPs)
chr2 (135-240)||(4566030-4566135)
chr2 (148-240)||(14698128-14698220)
chr2 (148-240)||(25332710-25332802)
chr2 (148-240)||(43388579-43388671)
chr2 (138-229)||(25383397-25383488)
chr2 (153-236)||(38809841-38809924)
chr2 (149-240)||(775807-775898)
chr2 (135-237)||(10580765-10580867)
chr2 (148-229)||(4133172-4133253)
chr2 (152-240)||(39866596-39866685)
chr2 (148-228)||(16807439-16807519)
chr2 (148-228)||(16846720-16846800)
chr2 (138-229)||(29808963-29809054)
chr2 (148-229)||(441153-441234)
chr2 (148-233)||(33093514-33093599)
chr2 (145-229)||(29396599-29396683)
chr2 (149-229)||(42743178-42743256)
chr2 (137-229)||(8774202-8774294)
chr2 (138-229)||(42753897-42753988)
chr2 (137-229)||(8789341-8789433)
chr2 (149-229)||(12393842-12393922)
chr2 (153-229)||(38926756-38926832)
chr2 (197-240)||(2459913-2459956)
chr2 (136-190)||(14378158-14378212)
chr2 (202-240)||(41984559-41984597)
chr2 (148-229)||(12342243-12342324)
chr2 (148-229)||(30855255-30855336)
chr2 (148-229)||(32227933-32228014)
chr2 (135-206)||(44228638-44228710)
chr2 (148-191)||(7743588-7743631)
chr2 (148-190)||(34225938-34225980)
chr2 (148-213)||(36106325-36106390)
chr2 (149-233)||(13562140-13562223)
[»] chr3 (42 HSPs)
chr3 (148-240)||(20512416-20512508)
chr3 (138-240)||(25722371-25722473)
chr3 (148-240)||(51381865-51381957)
chr3 (148-240)||(2988530-2988622)
chr3 (148-240)||(54261556-54261648)
chr3 (138-240)||(36541632-36541734)
chr3 (138-240)||(54933115-54933217)
chr3 (137-229)||(38363941-38364033)
chr3 (149-229)||(45213642-45213722)
chr3 (149-240)||(42006983-42007074)
chr3 (135-237)||(44645483-44645585)
chr3 (135-229)||(47138115-47138209)
chr3 (140-237)||(10351927-10352024)
chr3 (144-229)||(36729687-36729772)
chr3 (148-229)||(47895263-47895344)
chr3 (138-227)||(49470926-49471015)
chr3 (148-240)||(43687803-43687895)
chr3 (149-229)||(45391878-45391958)
chr3 (148-229)||(33193950-33194031)
chr3 (148-229)||(51398160-51398241)
chr3 (149-228)||(31853482-31853561)
chr3 (153-240)||(32303830-32303917)
chr3 (149-240)||(52201847-52201938)
chr3 (148-229)||(2458158-2458239)
chr3 (156-229)||(23525243-23525316)
chr3 (145-229)||(3152723-3152807)
chr3 (138-229)||(41850531-41850622)
chr3 (148-229)||(45566949-45567027)
chr3 (172-229)||(30426266-30426323)
chr3 (148-229)||(53200600-53200681)
chr3 (145-228)||(51482086-51482170)
chr3 (135-190)||(31290883-31290938)
chr3 (153-240)||(43169475-43169562)
chr3 (137-240)||(53560805-53560908)
chr3 (148-190)||(43580668-43580710)
chr3 (148-190)||(44648332-44648374)
chr3 (149-190)||(27483116-27483157)
chr3 (167-228)||(33024238-33024299)
chr3 (149-186)||(42940171-42940208)
chr3 (148-229)||(44676371-44676452)
chr3 (148-228)||(11393696-11393776)
chr3 (138-182)||(43736783-43736827)
[»] chr4 (44 HSPs)
chr4 (148-240)||(47321282-47321374)
chr4 (148-240)||(34124432-34124524)
chr4 (138-240)||(19282323-19282425)
chr4 (135-240)||(45889700-45889805)
chr4 (138-238)||(17499630-17499730)
chr4 (138-240)||(6462151-6462253)
chr4 (138-240)||(28116382-28116484)
chr4 (144-229)||(27653824-27653909)
chr4 (148-229)||(52957716-52957797)
chr4 (148-237)||(54233956-54234045)
chr4 (138-240)||(55126634-55126736)
chr4 (148-240)||(24259748-24259840)
chr4 (138-228)||(54042098-54042189)
chr4 (148-229)||(1819712-1819793)
chr4 (148-229)||(29519451-29519532)
chr4 (148-229)||(42605722-42605803)
chr4 (148-229)||(52847980-52848061)
chr4 (148-228)||(39984968-39985048)
chr4 (138-229)||(2728314-2728405)
chr4 (148-229)||(37654560-37654641)
chr4 (148-229)||(38991689-38991770)
chr4 (148-229)||(40345273-40345354)
chr4 (137-229)||(2493252-2493344)
chr4 (148-240)||(51434180-51434272)
chr4 (138-229)||(53814413-53814504)
chr4 (148-240)||(31941695-31941784)
chr4 (148-229)||(18430139-18430220)
chr4 (148-229)||(24941030-24941111)
chr4 (167-240)||(34534035-34534108)
chr4 (138-229)||(20448189-20448278)
chr4 (149-229)||(44571792-44571872)
chr4 (149-233)||(49089609-49089693)
chr4 (138-229)||(45043504-45043595)
chr4 (138-229)||(56373491-56373582)
chr4 (135-213)||(34316386-34316464)
chr4 (148-190)||(56556204-56556246)
chr4 (148-229)||(19878798-19878879)
chr4 (148-229)||(40010798-40010879)
chr4 (148-240)||(4408100-4408192)
chr4 (153-228)||(28734749-28734824)
chr4 (136-190)||(22212526-22212580)
chr4 (167-229)||(29370753-29370815)
chr4 (148-229)||(49080403-49080484)
chr4 (148-228)||(50623235-50623315)
[»] chr1 (47 HSPs)
chr1 (148-240)||(22665075-22665167)
chr1 (148-240)||(28200144-28200236)
chr1 (149-240)||(49894920-49895011)
chr1 (148-229)||(15823184-15823265)
chr1 (148-240)||(50591240-50591332)
chr1 (153-240)||(672209-672296)
chr1 (148-240)||(2459144-2459236)
chr1 (153-229)||(49468636-49468712)
chr1 (148-239)||(254833-254924)
chr1 (153-240)||(42650176-42650263)
chr1 (148-237)||(44582700-44582789)
chr1 (148-238)||(5854146-5854236)
chr1 (148-240)||(26252258-26252350)
chr1 (138-229)||(32806848-32806939)
chr1 (148-229)||(15573763-15573844)
chr1 (137-202)||(30686811-30686876)
chr1 (148-229)||(48009160-48009241)
chr1 (149-233)||(38530760-38530844)
chr1 (153-240)||(9333218-9333305)
chr1 (153-240)||(9356991-9357078)
chr1 (153-236)||(11134387-11134470)
chr1 (138-229)||(31491680-31491771)
chr1 (149-236)||(40717283-40717370)
chr1 (148-206)||(43755199-43755257)
chr1 (148-229)||(25151960-25152041)
chr1 (138-190)||(84430-84482)
chr1 (138-237)||(9552269-9552366)
chr1 (137-229)||(52125045-52125137)
chr1 (138-229)||(5463725-5463816)
chr1 (138-229)||(10842930-10843021)
chr1 (135-190)||(28751317-28751372)
chr1 (138-229)||(35847846-35847937)
chr1 (135-206)||(45749408-45749479)
chr1 (138-229)||(49426329-49426420)
chr1 (148-229)||(43358134-43358215)
chr1 (148-229)||(48025174-48025255)
chr1 (148-200)||(48319927-48319979)
chr1 (147-190)||(17805765-17805808)
chr1 (135-190)||(48259772-48259827)
chr1 (148-182)||(6377208-6377242)
chr1 (148-190)||(13408256-13408298)
chr1 (148-229)||(9915594-9915675)
chr1 (145-190)||(15646992-15647037)
chr1 (167-240)||(44024685-44024758)
chr1 (138-190)||(12851920-12851972)
chr1 (153-229)||(46286743-46286819)
chr1 (145-229)||(50094380-50094464)
[»] chr7 (37 HSPs)
chr7 (148-240)||(19906553-19906645)
chr7 (148-240)||(32345756-32345848)
chr7 (138-238)||(36446981-36447081)
chr7 (148-240)||(39117410-39117502)
chr7 (148-229)||(37815874-37815955)
chr7 (148-228)||(45933509-45933589)
chr7 (138-229)||(23155372-23155463)
chr7 (148-240)||(6521958-6522050)
chr7 (138-240)||(26963620-26963722)
chr7 (135-229)||(42879841-42879935)
chr7 (148-229)||(1742141-1742222)
chr7 (148-229)||(44453283-44453364)
chr7 (138-229)||(35777969-35778060)
chr7 (135-229)||(13405034-13405128)
chr7 (148-229)||(23935571-23935652)
chr7 (148-229)||(29530855-29530936)
chr7 (137-233)||(27947410-27947506)
chr7 (148-226)||(16564723-16564801)
chr7 (148-226)||(16600861-16600939)
chr7 (135-229)||(48684873-48684967)
chr7 (137-229)||(7795152-7795244)
chr7 (138-229)||(10599513-10599604)
chr7 (138-229)||(27935917-27936008)
chr7 (148-226)||(31418433-31418511)
chr7 (138-236)||(36915512-36915610)
chr7 (145-229)||(22298146-22298235)
chr7 (153-229)||(41137878-41137954)
chr7 (148-227)||(8334214-8334293)
chr7 (153-240)||(19276543-19276629)
chr7 (198-240)||(10684801-10684843)
chr7 (153-190)||(42121731-42121768)
chr7 (148-229)||(45948550-45948631)
chr7 (145-237)||(31416669-31416761)
chr7 (174-237)||(29001512-29001575)
chr7 (135-190)||(40339647-40339702)
chr7 (136-190)||(5723175-5723229)
chr7 (138-190)||(40207299-40207351)
[»] chr8 (26 HSPs)
chr8 (149-240)||(14541669-14541760)
chr8 (148-240)||(8471397-8471489)
chr8 (148-237)||(34461504-34461593)
chr8 (148-240)||(34168134-34168226)
chr8 (138-229)||(4760471-4760562)
chr8 (149-240)||(18673022-18673113)
chr8 (148-229)||(9880423-9880504)
chr8 (153-227)||(4989630-4989704)
chr8 (148-229)||(39463407-39463488)
chr8 (148-240)||(27416641-27416733)
chr8 (148-229)||(9304556-9304637)
chr8 (148-200)||(9022574-9022626)
chr8 (148-236)||(11168826-11168914)
chr8 (169-240)||(13109127-13109198)
chr8 (148-229)||(5790566-5790649)
chr8 (165-229)||(17921107-17921171)
chr8 (145-229)||(39698585-39698669)
chr8 (148-190)||(32326647-32326689)
chr8 (135-229)||(43084536-43084630)
chr8 (138-190)||(4530055-4530107)
chr8 (138-229)||(31899160-31899251)
chr8 (149-191)||(8106811-8106853)
chr8 (148-190)||(38328977-38329019)
chr8 (156-190)||(45187226-45187260)
chr8 (137-206)||(8382398-8382467)
chr8 (152-233)||(31693545-31693626)
[»] chr6 (16 HSPs)
chr6 (150-240)||(6992541-6992631)
chr6 (148-240)||(25932769-25932861)
chr6 (149-240)||(17345061-17345148)
chr6 (138-238)||(6143226-6143326)
chr6 (138-228)||(24163625-24163716)
chr6 (148-229)||(19675128-19675209)
chr6 (138-238)||(6140741-6140841)
chr6 (138-229)||(1135075-1135166)
chr6 (152-229)||(10520316-10520393)
chr6 (148-229)||(23259247-23259328)
chr6 (153-229)||(24555854-24555930)
chr6 (156-240)||(26189649-26189733)
chr6 (153-190)||(9940836-9940873)
chr6 (148-213)||(29713328-29713393)
chr6 (148-208)||(234196-234256)
chr6 (148-220)||(34513580-34513652)
[»] scaffold0110 (1 HSPs)
scaffold0110 (138-229)||(24652-24743)
[»] scaffold0003 (1 HSPs)
scaffold0003 (153-240)||(321866-321953)
[»] scaffold0047 (1 HSPs)
scaffold0047 (148-240)||(70375-70467)
[»] scaffold0048 (1 HSPs)
scaffold0048 (153-229)||(62783-62859)
[»] scaffold0078 (1 HSPs)
scaffold0078 (149-226)||(1371-1448)
[»] scaffold0015 (1 HSPs)
scaffold0015 (148-229)||(21003-21084)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 33584767 - 33584987
Alignment:
Q  18 ccagcatcatcgttcattaattccccatcacacaccttattactactattcaatactcactttcgccttatttcttgacttcattatattggcgatgcgt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  33584767 ccagcatcatcgttcattaattccccatcacacaccttattactattattcaatactcactttcaccttatttcttgacttcattatattggcgatgcat 33584866  T
Q  118 acaattactactaaacctattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatca 217  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||| |||||||| |||||||  ||| |||||| |||||||||||||||||||||| |||    
T  33584867 acaattactgctaaacttattactctatctgttttaaaataagtgtcgctttaaccaattg--cacggattaagaaacggaataaaatagtcaaatgtca 33584964  T
Q  218 tagcaattttactaaaataacct 240  Q
    || ||||||||||||||||||||    
T  33584965 taacaattttactaaaataacct 33584987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 27652241 - 27652333
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  27652241 gttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataacct 27652333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 21375572 - 21375653
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| || ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  21375572 gtttcaaaatgagtgtcactttagccaattgcacaaagattaaagaatggaataaaatagtcaaatatcatagcaattttac 21375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 29653435 - 29653524
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataac 238  Q
    ||||||||||||| ||| |||||||||||||| || ||||||| || | |||||||||||||||| ||||||||||||||||||||||||    
T  29653435 ttttaaaatgagtgtcgttttagccaattgcatacggattaaagaatgaaataaaatagtcaaatgtcatagcaattttactaaaataac 29653524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 36296054 - 36296146
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| || | ||||||||| |||||| | ||||||||||||||||||||||||    
T  36296054 gttttaaaatgagtgtcgctttagccaattgcacatggattaaagaatgaaataaaataatcaaatgtaatagcaattttactaaaataacct 36296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 42329466 - 42329558
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| |||||||||||||||||| ||||||||||||| |||||  || | |||||| ||||||||| ||||||||||||||||||||||||||    
T  42329466 gtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataacct 42329558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 34972572 - 34972653
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||| || || |||||||||    
T  34972572 gttttaaaatgagtgtcgctttagccaattgcacacagattaataaatggaataaagtagtcaaatgtcgtatcaattttac 34972653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 33822423 - 33822515
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||| ||||| |||| |||||||||||||||||||  || | |||||||||||||||| | ||||||||||||||||||||||||    
T  33822423 gtttcaaaatgaatatcgttttaaccaattgcacacagattaattaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 33822515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 42103985 - 42104066
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  42103985 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 42104066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 793531 - 793618
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||  || |||||||||||||||||| |||||  || |||||||| ||||| ||| ||||||||||||||||||||||||||    
T  793531 aaaatgagtgccgttttagccaattgcacacaaattaaggaatggaataaagtagtccaatgtcatagcaattttactaaaataacct 793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 39730187 - 39730096
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||  |||||||||||||| ||| ||||| |||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  39730187 tactctattcgttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 39730096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 26660985 - 26660904
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| | ||||||| |||||||||||||||    
T  26660985 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26660904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 26932578 - 26932497
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| | ||||||| |||||||||||||||    
T  26932578 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26932497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 42661862 - 42661943
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  42661862 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 42661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 4833559 - 4833650
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| |||||||||||||||||||| |  ||||  || | |||||| |||| |||| ||||| ||||||||||||||||||||    
T  4833559 ttttaaaatgagtgtcgctttagccaattgcacatatgttaaggaatgaaataaagtagttaaatgtcataacaattttactaaaataacct 4833650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 14620424 - 14620496
Alignment:
Q  156 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||| |||||||||||||||||||||| |||||  ||  ||||||| ||||||||| ||||||||||||||    
T  14620424 atgagtgtcgctttagccaattgcacacatattaaggaatagaataaagtagtcaaatgtcatagcaatttta 14620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 42977996 - 42978076
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||||||| ||| ||||||||||| ||||||||||||  || | |||||| ||||||||| |||||||||||||||    
T  42977996 ttttagaatgagtgtcgttttagccaatttcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 2729698 - 2729789
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||| | |||||||||||||||||| |||||||||  || | |||||| ||||||||  |||||||||||||||    
T  2729698 tactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaataaagtagtcaaacgtcatagcaattttac 2729789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 15567139 - 15567056
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    ||||||||| |||||||||||| || ||||||||||||  || | ||| |  |||||||||||||||||||||||||| |||||    
T  15567139 aaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaata 15567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 36783586 - 36783544
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  36783586 gtttcaaaatgagtatcgctttagccaattgcacacagattaa 36783544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 32962931 - 32963020
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataac 238  Q
    ||||||||||||| |||||||| | |||||||||||||||||  || | |||| | ||||||| | |||||||| ||||| |||||||||    
T  32962931 ttttaaaatgagtgtcgctttaactaattgcacacagattaattaatgaaatagagtagtcaattgtcatagcagttttattaaaataac 32963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4751442 - 4751494
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||| |||||    
T  4751442 tactctttctgttttaaaatgagtgtcgttttagccaattgcacacatattaa 4751494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 8336330 - 8336410
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| ||| ||||||||||| |||| | |||||  || |||||||| ||||||||| ||||| |||||||||    
T  8336330 ttttaaaatgagtgtcgttttagccaattacacaaatattaaggaatggaataaagtagtcaaatgtcataacaattttac 8336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 27600624 - 27600544
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| || ||||||||||||| ||||| |||||  || | |||||| |||||||||||||| | ||||||||    
T  27600624 ttttaaaatgagtgtcactttagccaattgaacacatattaaggaatgaaataaagtagtcaaatatcattgtaattttac 27600544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 34919961 - 34919881
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    ||||||||||||||||||||||||| ||||||||||||  || | ||||||||| |||     ||||||||||||||||||    
T  34919961 aaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaa 34919881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 34445952 - 34446030
Alignment:
Q  150 tttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||| |||||||| ||||||||||| | |||||  || | |||||| |||||||||||||||| ||||||||    
T  34445952 tttaaaatgagtgtcgctttaaccaattgcacatatattaaggaatgaaataaagtagtcaaatatcatag-aattttac 34446030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 36660669 - 36660614
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||  ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  36660669 tattactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaa 36660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4742178 - 4742230
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||| ||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  4742178 tactctttctgttttaaaatgagtgtcgttttagtcaattgcacacatattaa 4742230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 166571 - 166613
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  166571 gtttcaaaatgagtgtcgcgttagccaattgcacacagattaa 166613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 24436462 - 24436504
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||||||||| ||| |||||||||||||||| |||||||    
T  24436462 gttttaaaatgagtgtcgttttagccaattgcacatagattaa 24436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 29807236 - 29807317
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||| ||| |||||||||||||| |||| || |||||  || |||||||| ||||||||| | |||| ||||||||    
T  29807236 gtttcaaaataagtgtcgctttagccaatagcacgcatattaaggaatggaataaattagtcaaatgtaatagaaattttac 29807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 3305936 - 3306012
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||| |||| ||||||||||  | |||||  || | |||||| ||||||||| |||||||||||||||    
T  3305936 aaaatgagtgtcgttttaaccaattgcacgtatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 3306012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 12167522 - 12167574
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||| || |||| ||||||||| |||||||||| ||||||||||| |||||    
T  12167522 tactctctccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaa 12167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 14006118 - 14006042
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| | |||||||||||||||| | | |||||  || | |||||| ||||||||| ||||||| |||||||    
T  14006118 aaaatgagtgttgctttagccaattgcatatatattaaggaatgaaataaagtagtcaaatgtcatagctattttac 14006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 4566030 - 4566135
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 234  Q
    ||||||||| || |||||||||||||| ||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  4566030 tattactctctccgttttaaaatgagtgtcgctttagtcaattacacacagattaaaaaatgtaataaaatagtcaaatatcataacaattttactaaaa 4566129  T
Q  235 taacct 240  Q
    ||||||    
T  4566130 taacct 4566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 14698220 - 14698128
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||||||||||||||    
T  14698220 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaataacct 14698128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 25332802 - 25332710
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||||| |||||||||||||||||  ||  ||||||| ||||||||| ||||||||||||||||||||||||||    
T  25332802 gttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataacct 25332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 43388579 - 43388671
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  43388579 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataacct 43388671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 25383397 - 25383488
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| || |||||  || |||||||| |||||||||||||||||||||||||    
T  25383397 tactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatggaataaagtagtcaaatatcatagcaattttac 25383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 38809924 - 38809841
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    ||||||||||||| ||||||||||||||||||||||||  || |||||||| | ||||||| ||||||||||||||||||||||    
T  38809924 aaaatgagtatcgttttagccaattgcacacagattaaggaaaggaataaagtggtcaaatgtcatagcaattttactaaaata 38809841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 775807 - 775898
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||| | |||||||||||||||||| |||||||||  ||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  775807 ttttaaaatgaatgtcgctttagccaattgcatacagattaaggaatagaataaagtagtcaaatgtcataacaattttactaaaataacct 775898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 10580765 - 10580867
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 234  Q
    |||||||| ||  |||| ||||||||||||| || |||||||||||||| ||| ||  || ||||||||||||||||||||||| ||||||||| |||||    
T  10580765 tattactcaattcgtttcaaaatgagtatcgtttaagccaattgcacacggatcaaggaatggaataaaatagtcaaatatcatcgcaattttattaaaa 10580864  T
Q  235 taa 237  Q
    |||    
T  10580865 taa 10580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 4133253 - 4133172
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  4133253 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 4133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 39866596 - 39866685
Alignment:
Q  152 taaaatgagtatcgctttagccaatt-gcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||| ||| |||| |||||| |||||||||||||  || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  39866596 taaaatgagtgtcgttttaaccaatttgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataacct 39866685  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 16807439 - 16807519
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| ||||||||    
T  16807439 gttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16807519  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 16846720 - 16846800
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| ||||||||    
T  16846720 gttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16846800  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 29809054 - 29808963
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| || ||||||||||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29808963  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 441153 - 441234
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  441153 gtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 441234  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 33093599 - 33093514
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    ||||| ||||||||||||||||||||||||| |||| |||||| ||| | |||||| |||| |||| ||||| |||||||||||||    
T  33093599 gttttcaaatgagtatcgctttagccaattgtacacggattaagaaatgaaataaagtagttaaatgtcataacaattttactaaa 33093514  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 29396599 - 29396683
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||  || | |||||| ||||||||| || ||||||||||||    
T  29396599 tctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29396683  T

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Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 42743256 - 42743178
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| ||||||||||||||||  ||||||||||  || | |||||| ||||||||| |||||||||||||||    
T  42743256 ttttaaaatgagtgtcgctttagccaattg--cacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42743178  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 8774294 - 8774202
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||||||||||||| | | ||||| |||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  8774294 ttactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataaaatagtcaaatgtcataacaattttac 8774202  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 42753988 - 42753897
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || |||| ||||||| | ||||||||||||||| |||||| |||||| || | |||||| ||| ||||| |||||||||||||||    
T  42753988 tactctgtccgtttcaaaatgactgtcgctttagccaattacacacatattaaagaatgaaataaagtagacaaatgtcatagcaattttac 42753897  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 8789341 - 8789433
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||| ||||||||| | | ||||| |||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  8789341 ttactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 8789433  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 12393842 - 12393922
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| |||  ||||||| || |||||||||| ||||||||| | |||||| |||| |||| |||||||||||||||    
T  12393842 ttttaaaatcagtgccgctttaaccgattgcacacatattaaaaaatgaaataaagtagttaaatgtcatagcaattttac 12393922  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 38926832 - 38926756
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||||||||| |||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  38926832 aaaatgagtgtcgctttagtcaattgcacacatattaatgaatgaaataaagtagtcaaatgtcataacaattttac 38926756  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 2459956 - 2459913
Alignment:
Q  197 gaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  2459956 gaataaagtagtcaaatatcatagcaattttactaaaacaacct 2459913  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 14378158 - 14378212
Alignment:
Q  136 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||| || |||||||||||||| |||||||||| |||||||||||| ||||    
T  14378158 attactctctccgttttaaaatgagtgtcgctttagctaattgcacacagtttaa 14378212  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 41984597 - 41984559
Alignment:
Q  202 aaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  41984597 aaatagtcaaatgtcatagcaattttactaaaataacct 41984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 12342324 - 12342243
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| ||||||||||||||||   |||||  || | |||||| ||||||||| ||||| |||||||||    
T  12342324 gttttaaaatgagtgtcgttttagccaattgcacatttattaaggaatgaaataaagtagtcaaatgtcataacaattttac 12342243  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 30855336 - 30855255
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||| |||||||||| || |||||  ||  ||||||||||||||||| || || |||||||||    
T  30855336 gtttcaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaaatagtcaaatgtcttaacaattttac 30855255  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 32227933 - 32228014
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||| || ||||||||||||||||||||||| |||||  || | |||||| || |||||| ||||| |||||||||    
T  32227933 gtttcaaaataagcatcgctttagccaattgcacacaaattaaggaatgaaataaagtattcaaatgtcataacaattttac 32228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 44228710 - 44228638
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaa-ttgcacacagattaaaaaacggaataaaata 206  Q
    ||||||||  || |||||||||||| | ||||||||||||| |||||||| |||||||||| ||||| |||||    
T  44228710 tattactccctccgttttaaaatgaatgtcgctttagccaatttgcacacggattaaaaaatggaatgaaata 44228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 7743631 - 7743588
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaa 191  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||    
T  7743631 gtttcaaaatgagtgtcgctttagccaatttcacacagattaaa 7743588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 34225980 - 34225938
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  34225980 gtttcaaaatgagtgtcgctttagccaattgcacatagattaa 34225938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 36106325 - 36106390
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 213  Q
    |||||||||||||| |||||||||| ||||||| ||| |||||  || | |||||| |||||||||    
T  36106325 gttttaaaatgagtgtcgctttagcaaattgcatacatattaaggaatgaaataaagtagtcaaat 36106390  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 13562223 - 13562140
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    ||||||||||||| ||| ||| | |||||||||||| |||||  || |||| ||| ||||||||| |||||  ||||||||||||    
T  13562223 ttttaaaatgagtgtcgtttttgtcaattgcacacatattaaggaatggaagaaagtagtcaaatgtcata-taattttactaaa 13562140  T

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Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 20512416 - 20512508
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  20512416 gttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataacct 20512508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 25722371 - 25722473
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  25722371 tactctctctgtttcaaaataagtatcgatttagccaattgcacacagattaagaaatggaataaagtagtcaaatgtcataacaattttactaaaataa 25722470  T
Q  238 cct 240  Q
    |||    
T  25722471 cct 25722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 51381957 - 51381865
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||  || | ||||||||||||||||||||||||| |||||||||||||||||    
T  51381957 gtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataacct 51381865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 2988530 - 2988622
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||  || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  2988530 gtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataacct 2988622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 54261648 - 54261556
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||||||||| |||||||||||| |||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  54261648 gtttcaaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataacct 54261556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 36541734 - 36541632
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| | |||||  || | |||||||||||||||| | ||||||||||||||||||| |    
T  36541734 tactctatctgttttaaaatgagtgtcgctttaaccaattacacatatattaaggaatgaaataaaatagtcaaatgttatagcaattttactaaaatta 36541635  T
Q  238 cct 240  Q
    |||    
T  36541634 cct 36541632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 54933115 - 54933217
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| | |||||  || | |||||| ||||||||| ||||| |||||||||||||||||    
T  54933115 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 54933214  T
Q  238 cct 240  Q
    |||    
T  54933215 cct 54933217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 38364033 - 38363941
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||| || |||||||||||||| ||| |||||||||||||| |||||||||  || ||||||||  |||||||| |||||||||||||||    
T  38364033 ttactctctccgttttaaaatgagtgtcgttttagccaattgcatacagattaaccaatggaataaagcagtcaaatgtcatagcaattttac 38363941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 45213642 - 45213722
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  45213642 ttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 45213722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 42006983 - 42007074
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| ||| |||||||||||||| |  ||||||| ||  |||||||||||||| || ||||||||||||| ||||||||||||    
T  42006983 ttttaaaatgagtgtcgatttagccaattgcatatggattaaagaatagaataaaatagtcagatgtcatagcaatttttctaaaataacct 42007074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 44645585 - 44645483
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 234  Q
    |||||||||||| |||| ||||| | | ||| |||||| |||| |||||| |||||| || | |||||| ||||||||||||||||||||||| ||||||    
T  44645585 tattactctatccgtttcaaaataaatgtcgttttagctaattacacacatattaaagaatgaaataaagtagtcaaatatcatagcaattttgctaaaa 44645486  T
Q  235 taa 237  Q
    |||    
T  44645485 taa 44645483  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 47138209 - 47138115
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||| ||| |||| ||||||||| || |||||| |||||||||||| |||||| ||  ||||||| ||||||||| |||||||||||||||    
T  47138209 tattactccatccgtttcaaaatgagtgtcactttagtcaattgcacacatattaaataattgaataaagtagtcaaatgtcatagcaattttac 47138115  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 10351927 - 10352024
Alignment:
Q  140 ctctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||||||||||||||||||||  ||||||||| |||||| | ||||||||| |||   |||||| || ||||||||||||||||||| |||| |||||    
T  10351927 ctctatctgttttaaaatgagcgtcgctttagtcaattgtatacagattaagaaattaaataaagtaatcaaatatcatagcaatttcactacaataa 10352024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 36729687 - 36729772
Alignment:
Q  144 atctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||| ||||||||  ||| |||||||||||||||||| |||||  || |||||||| ||||||||||||||| |||||||||    
T  36729687 atctgtttcaaaatgagcgtcgttttagccaattgcacacatattaagtaatggaataaagtagtcaaatatcataacaattttac 36729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 47895263 - 47895344
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| |||||| || |||||||||||||||    
T  47895263 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcatatgtcatagcaattttac 47895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 49471015 - 49470926
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttt 227  Q
    |||||| || |||||||||||||||||| ||||   ||||||||||| |||||| ||  ||||||||||||||||| |||||||||||||    
T  49471015 tactctctccgttttaaaatgagtatcgttttaaataattgcacacaaattaaagaattgaataaaatagtcaaatgtcatagcaatttt 49470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 43687803 - 43687895
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||| ||| ||| ||||| ||||||||||| ||||||  || |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  43687803 gtttcaaaataagtgtcgttttagtcaattgcacacggattaatgaatggaataaagtagtcaaatgtcataacaattttactaaaataacct 43687895  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 45391878 - 45391958
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| ||| ||||||||||||| |||| |||||| || |||||||| || |||||| |||||||||||||||    
T  45391878 ttttaaaatgagtgtcggtttagccaattgcgcacatattaaacaaaggaataaagtaatcaaatgtcatagcaattttac 45391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 33193950 - 33194031
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||  || | |||||| ||||||||| ||||| |||||||||    
T  33193950 gtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 33194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 51398241 - 51398160
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||| | |||||| || |||||| | ||| |||||||||    
T  51398241 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatcaaatgttataacaattttac 51398160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 31853482 - 31853561
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    ||||||||||| | |||||||| ||||||||||  |||||||| || | |||||||||||||||| ||||| ||||||||    
T  31853482 ttttaaaatgaatgtcgctttaaccaattgcacttagattaaagaatgaaataaaatagtcaaatgtcataacaatttta 31853561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 32303830 - 32303917
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||| ||| |||| | ||| | |||||||||||  || | |||||| ||||||||| ||||||||||||||||||||||||||    
T  32303830 aaaatgagtgtcgttttaactaatcgtacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataacct 32303917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 52201847 - 52201938
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||| || ||| ||||| ||||||||||| ||||||  ||  |||||||||||| |||| |||||  |||||||||||||||||||    
T  52201847 ttttaaaatgcgtgtcgttttagtcaattgcacacggattaaggaatagaataaaatagttaaatgtcataataattttactaaaataacct 52201938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 2458239 - 2458158
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| || ||||||||||||||||||| |||||  || | |||||| |||| |||| |||||||||||||||    
T  2458239 gtttcaaaatgagtgtcactttagccaattgcacacatattaaggaatgcaataaagtagtaaaatgtcatagcaattttac 2458158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 23525243 - 23525316
Alignment:
Q  156 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  23525243 atgagtgtcgttttagccaattgcacacatattaaggaagggaataaagtagtcaaatgtcataacaattttac 23525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 3152723 - 3152807
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||||||| ||| |||| ||||||||||||| |||||  || | |||||| |||||| || ||||| |||||||||    
T  3152723 tctgttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaataaagtagtcagatgtcataacaattttac 3152807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 41850622 - 41850531
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| |||||||||  ||||||||| ||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  41850622 tactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 41850531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 45567027 - 45566949
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||    | |||||| ||||||||| |||||||||||||||    
T  45567027 gttttaaaatgagtgtcattttagccaattgcacatagattaaat---gtaataaagtagtcaaatgtcatagcaattttac 45566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 30426266 - 30426323
Alignment:
Q  172 ccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||||||||  || |||||| | ||||||||| |||||||||||||||    
T  30426266 ccaattgcacacagattaaggaatggaatatagtagtcaaatgtcatagcaattttac 30426323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 53200600 - 53200681
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| |||||||||  | |||||| ||||| |||| |||||||| || | |||||| ||||||||| |||||||||||||||    
T  53200600 gtttcaaaatgagtgccactttagtcaattacacaaagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 53200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 51482170 - 51482086
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatca-tagcaatttta 228  Q
    ||||||||||||||||| ||| ||||  ||||| ||||||||||||  || | |||||| ||||||||||| | |||||||||||    
T  51482170 tctgttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaataaagtagtcaaatattagtagcaatttta 51482086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 31290883 - 31290938
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||  || |||||||||||||| ||| ||||||||||| ||||||||||||    
T  31290883 tattactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaa 31290938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 43169562 - 43169475
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||| ||| ||| ||||| ||||| |||| |||||||  || | |||||| ||||||||| |||| ||| |||||||||||||||||    
T  43169562 aaaattagtgtcgttttagtcaattacacaaagattaaggaatgaaataaagtagtcaaatgtcattgcagttttactaaaataacct 43169475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 53560908 - 53560805
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    ||||||| || |||||||||| ||| ||| ||||||||||| || ||| |||||  ||   |||||| |||| |||| |||||  |||||||||||||||    
T  53560908 ttactctctccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaata 53560809  T
Q  237 acct 240  Q
    ||||    
T  53560808 acct 53560805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 43580710 - 43580668
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  43580710 gttttaaaatgagcgacgctttagccaattgcacacagattaa 43580668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 44648332 - 44648374
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||    
T  44648332 gtttcaaaatgagtgtcgttttagccaattgcacacagattaa 44648374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 27483116 - 27483157
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||||||| ||||||||||| |||||||||| |||||    
T  27483116 ttttaaaatgagtgtcgctttagcccattgcacacaaattaa 27483157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 33024238 - 33024299
Alignment:
Q  167 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||||||| |||||  ||  ||||||| ||||| |||||| |||||||||||    
T  33024238 tttagccaattgcacacaaattaaggaattgaataaagtagtcgaatatcgtagcaatttta 33024299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 42940208 - 42940171
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacaga 186  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  42940208 ttttaaaatgagtgtcgctttagccaattacacacaga 42940171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 44676452 - 44676371
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| | | ||||||||||| |||||| |||||  ||  ||||||| |||| |||| |||||||||||||||    
T  44676452 gtttcaaaatgagtgttgttttagccaattacacacatattaaggaatagaataaagtagttaaatgtcatagcaattttac 44676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 11393776 - 11393696
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||| ||||||||  || ||| ||| | ||||| |||  ||||||| |||||||||| |||| ||||||||    
T  11393776 gttttaaaatgagtgtcgctttaatcagttgtacatatattaagaaatagaataaagtagtcaaataccataacaatttta 11393696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 43736783 - 43736827
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcaca 182  Q
    ||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcaca 43736827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 47321374 - 47321282
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  47321374 gttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataacct 47321282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 34124524 - 34124432
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  34124524 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataacct 34124432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 19282323 - 19282425
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||  || |||||||| ||||||||| ||||| |||||||||||||||||    
T  19282323 tactcgatccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaattttactaaaataa 19282422  T
Q  238 cct 240  Q
    |||    
T  19282423 cct 19282425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 45889805 - 45889700
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 234  Q
    |||||||||||| |||| ||||||||| ||| |||||||||||||||||| |||||  || | |||||| ||||||||| | ||||||||||||||||||    
T  45889805 tattactctatccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgttatagcaattttactaaaa 45889706  T
Q  235 taacct 240  Q
    ||||||    
T  45889705 taacct 45889700  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 17499630 - 17499730
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||||| || |||||||||||||| ||| ||||| ||||||||||||||||||  || | |||||||||||||||| ||||| |||||||||||||||||    
T  17499630 tactctctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaataa 17499729  T
Q  238 c 238  Q
    |    
T  17499730 c 17499730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 6462253 - 6462151
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||| ||||||||  ||| |||||||||||||||||||||||| ||| | |||||| ||||||||| |||||||||||| ||||||||||    
T  6462253 tactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataaagtagtcaaatttcatagcaatttgactaaaataa 6462154  T
Q  238 cct 240  Q
    |||    
T  6462153 cct 6462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 28116484 - 28116382
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||| ||||||||| || ||||| |||||||||||| ||||||  || |||||||| ||||||||| |||||||||||||||||||||||    
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 28116385  T
Q  238 cct 240  Q
    |||    
T  28116384 cct 28116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 27653909 - 27653824
Alignment:
Q  144 atctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  27653909 atctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 27653824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 52957716 - 52957797
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  || |||||||| ||||||||| |||||||||||||||    
T  52957716 gtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttac 52957797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 54234045 - 54233956
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||| ||||||||| |||||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||| |||||||||||||||||    
T  54234045 gtttcaaaatgagtgtcgctttagccaattgcatacaaattaagaaatggaataaagtactcaaatatcatatcaattttactaaaataa 54233956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 55126736 - 55126634
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||||||||||| | ||| ||||||||||||||||  ||||||  || | |||||| ||||||||| |||||||||||||||||||||||    
T  55126736 tactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 55126637  T
Q  238 cct 240  Q
    |||    
T  55126636 cct 55126634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 24259840 - 24259748
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||| ||||||||||| | |||||  || | |||||| ||||||||| ||||| ||||||||||||||||||||    
T  24259840 gttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataacct 24259748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 54042098 - 54042189
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacaca-gattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||||  ||||| ||| |||||||||||||||||| || |||||||||||    
T  54042098 tactccatccgttttaaaatgagtgtcgttttagccaattgcacacataattaagaaatggaataaaatagtcaaatgtcgtagcaatttta 54042189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 1819793 - 1819712
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||| | ||||||||| |||||| |||||||||||| || | |||||| ||||||||| |||||||||||||||    
T  1819793 gttttaaaatgaatgtcgctttagtcaattgaacacagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 1819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 29519451 - 29519532
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| ||||||||||| |||||| |||||  || | |||||||||||||||||||||| |||||||||    
T  29519451 gttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaatagtcaaatatcataacaattttac 29519532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 42605803 - 42605722
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||| ||   |||||||||||||||| |||||||||||||||    
T  42605803 gttttaaaatgagcgtcgttttagtcaattgcacacagattaaagaataaaataaaatagtcaaatgtcatagcaattttac 42605722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 52847980 - 52848061
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| | | |||||||||||||| ||||||||| |||  ||||||| ||||||||| |||||||||||||||    
T  52847980 gttttaaaatgagtgttgttttagccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatagcaattttac 52848061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 39985048 - 39984968
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||| ||||||||| |||||||||||||||||| ||| |||||  ||  ||||||||||||||||| ||||||||||||||    
T  39985048 gtttcaaaatgagtgtcgctttagccaattgcatacatattaaggaattgaataaaatagtcaaatgtcatagcaatttta 39984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 2728314 - 2728405
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||  ||  ||||||| ||||||||| ||||| |||||||||    
T  2728314 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 2728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 37654641 - 37654560
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| |||||||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  37654641 gtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 37654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 38991689 - 38991770
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| ||||| |||||||||||||||||| ||| | |||||| |||| |||| ||||| |||||||||    
T  38991689 gttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatgtaataaagtagttaaatgtcataacaattttac 38991770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 40345273 - 40345354
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||| | |||||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  40345273 gttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 40345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 2493344 - 2493252
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||| ||||||||| ||| ||| |||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  2493344 ttactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 2493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 51434180 - 51434272
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||| | |||||||| ||||||||| | | |||||  || |||||||| ||||||||| ||||| |||||||| |||||||||||    
T  51434180 gttttaaaatgaatgtcgctttaaccaattgcatatatattaaggaatggaataaagtagtcaaatttcataacaattttattaaaataacct 51434272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 53814413 - 53814504
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||||||||||||| ||| |||| ||||| ||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  53814413 tactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 53814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 31941784 - 31941695
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||||||||||||  || ||   | || |||||||| ||||||||| |||||||||||||| |||||||||||    
T  31941784 gtttcaaaatgagtgtcgctttagccaattgcatgcaaat---agaatggaataaagtagtcaaatgtcatagcaattttattaaaataacct 31941695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 18430220 - 18430139
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| | |||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  18430220 gtttcaaaatgagtgttgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 18430139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 24941111 - 24941030
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| |||| |||||||||||||  ||||| || |||||||| ||||||||| ||||| |||||||||    
T  24941111 gtttcaaaatgagtgtcgttttaaccaattgcacacatgttaaagaatggaataaagtagtcaaatgtcataacaattttac 24941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 34534035 - 34534108
Alignment:
Q  167 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||| |||||||| ||||||||  ||  ||||||| || |||||| ||||||||||||||||||||||||||    
T  34534035 tttagctaattgcactcagattaaggaattgaataaagtaatcaaatgtcatagcaattttactaaaataacct 34534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 20448278 - 20448189
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||||||| |||||| ||  ||||||||||||||||||||| |||||  ||  ||||||| |||| |||| |||||||||||||||    
T  20448278 tactctctctgtttcaaaatgtgt--cgctttagccaattgcacacatattaaggaattgaataaagtagttaaatgtcatagcaattttac 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 44571792 - 44571872
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||| || ||||| ||||||||| ||| |||||  || | |||||||||||||||| |||||| ||||||||    
T  44571792 ttttaaaatgagtgtctctttaaccaattgcaaacatattaatgaatgaaataaaatagtcaaatgtcatagtaattttac 44571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 49089693 - 49089609
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    ||||||||||||| ||| ||||  |||||||||||| |||||  || | |||||  ||||||||||||||| |||||||||||||    
T  49089693 ttttaaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaataatgtagtcaaatatcataacaattttactaaa 49089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 45043504 - 45043595
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||||||| ||||| ||| ||| ||||| ||||||||||||  ||||  || | |||||| ||||||||| |||||||||||||||    
T  45043504 tactctctctgtttcaaaataagtgtcgttttagtcaattgcacacattttaaggaatgtaataaagtagtcaaatgtcatagcaattttac 45043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 56373491 - 56373582
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| || ||||||||||||| | ||| |||||  || |||||||| ||||||||| || ||||||||||||    
T  56373491 tactccatccgtttcaaaatgagtgtcactttagccaattgaagacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 56373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 34316464 - 34316386
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 213  Q
    ||||||||  || |||| ||||||||| || ||||| |||||||||||||||||||  || | ||||||||||||||||    
T  34316464 tattactcactccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaatagtcaaat 34316386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 56556204 - 56556246
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  56556204 gttttaaaatgagtgtcgctttaaccaattgcacacagattaa 56556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 19878879 - 19878798
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||| | ||||||||||||||||| || |||||||  || |||||||| || |||||| || ||||||||||||    
T  19878879 gtttcaaaatgaatgtcgctttagccaattgcgcagagattaaggaatggaataaagtaatcaaatgtcgtagcaattttac 19878798  T

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Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 40010798 - 40010879
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| ||||| | ||| |||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  40010798 gtttcaaaatgagtgtcgttttagtccattacacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 40010879  T

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Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 4408100 - 4408192
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||| | |||||||| | ||||||||| | |||||  || | |||||| ||||||| | ||||| ||||||||||||||||||||    
T  4408100 gtttcaaaatgaatgtcgctttaactaattgcacataaattaaggaatgaaataaagtagtcaagtgtcataacaattttactaaaataacct 4408192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 28734824 - 28734749
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    ||||||||| |||||||| ||||||||||| | |||||| ||  ||||||| ||||||||| |||||  |||||||    
T  28734824 aaaatgagtgtcgctttaaccaattgcacatatattaaagaattgaataaagtagtcaaatgtcataataatttta 28734749  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 22212580 - 22212526
Alignment:
Q  136 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||| ||| ||||||||||| || |||||||||||||||| ||||| |||||    
T  22212580 attactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaa 22212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 29370815 - 29370753
Alignment:
Q  167 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| |||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  29370815 tttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 29370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 49080403 - 49080484
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||| ||| |||||||| ||||||||||||| |||||  ||   |||||| ||||||||| |||||| ||||||||    
T  49080403 gtttcaaaataagtgtcgctttatccaattgcacacatattaaggaataaaataaagtagtcaaatgtcatagtaattttac 49080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 50623315 - 50623235
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||| ||| ||||| ||||| |||||| |||||  || | |||| | ||||||||| ||||| ||||||||    
T  50623315 gttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaatagagtagtcaaatgtcatatcaatttta 50623235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 22665167 - 22665075
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||||||||| ||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||| ||||||    
T  22665167 gttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaatggaataaagtagtcaaatatcatagcaattttactaaactaacct 22665075  T

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Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 28200144 - 28200236
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||||| | ||||||| ||||||||||||||||||||||||||    
T  28200144 gttttaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagttgtcaaatgtcatagcaattttactaaaataacct 28200236  T

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Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 49895011 - 49894920
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||  || |||||||||||||||||| ||||| ||||||||||||||||||||    
T  49895011 ttttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaataacct 49894920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 15823265 - 15823184
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||| |||| |||||||||||||||    
T  15823265 gttttaaaatgagtatcgttttagccaattgcacacatattaagaaatggaataaaatagttaaatgtcatagcaattttac 15823184  T

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Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 50591240 - 50591332
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||||||||||| |||||||||||  || |||||||| |||| |||| ||||| ||||||||||||||||||||    
T  50591240 gttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataaagtagtaaaatgtcataacaattttactaaaataacct 50591332  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 672209 - 672296
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||| ||| |||| |||||||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||||||||    
T  672209 aaaatgagtgtcgttttaaccaattgcacacagattatagaatggaataaagtagtcaaatatcatatcaattttactaaaataacct 672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 2459236 - 2459144
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||   ||| || ||||||||| ||||| ||||||||||||||||||||    
T  2459236 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataacct 2459144  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 49468636 - 49468712
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||||||||||||||||||||||||||||  || | |||||||||||||||| |||||||||||||||    
T  49468636 aaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 49468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 254833 - 254924
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacc 239  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||| ||| | | |||| ||||||||| |||||||||||||||||||||||||    
T  254833 gtttcaaaatgagtgtcgctttagtcaattacacacagattaagaaatgaactaaagtagtcaaatgtcatagcaattttactaaaataacc 254924  T

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Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 42650176 - 42650263
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||| | ||||||||||||||||||||||||||||| |  | |||||| || |||||| ||||||||||||||||||||||||||    
T  42650176 aaaatgaatgtcgctttagccaattgcacacagattaaagactgaaataaagtaatcaaatgtcatagcaattttactaaaataacct 42650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 44582700 - 44582789
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||||||||||||| |||||||||  |||||||||||||||||  || | |||||| ||||||||| ||||| |||||||||||||||||    
T  44582700 gttttaaaatgagtgtcgctttagtgaattgcacacagattaatgaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 44582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 5854146 - 5854236
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataac 238  Q
    |||| ||||||||| || |||||||||||||||||||||||||  ||  ||||||| |||| |||| ||||| ||||||||||||||||||    
T  5854146 gtttcaaaatgagtgtcactttagccaattgcacacagattaaggaatagaataaagtagttaaatgtcataacaattttactaaaataac 5854236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 26252350 - 26252258
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| | |||||| |||||||||||||||||||  || || || || ||||||||| |||| |||||||||||||||||||||    
T  26252350 gtttcaaaatgagtgttgctttaaccaattgcacacagattaaggaatgggattaagtagtcaaatgtcattgcaattttactaaaataacct 26252258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 32806848 - 32806939
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || |||| ||||||| | |||||||||||| ||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  32806848 tactctctccgtttcaaaatgattgtcgctttagccagttgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 32806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 15573844 - 15573763
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||| | ||| |||||||||||||||||| |||||| || |||||||| ||||||||| | |||||||||||||    
T  15573844 gtttcaaaatgaatgtcgttttagccaattgcacacaaattaaagaatggaataaagtagtcaaatgttatagcaattttac 15573763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 30686876 - 30686811
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataa 202  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||||||||||| ||| |||||||    
T  30686876 ttactccatctgttttaaaatgagtgtcgttttagctaattgcacacagattaagaaatggaataa 30686811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 48009241 - 48009160
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| ||||| |||||||||||| |||||  || | ||||||||||||||||||||||| ||||||||    
T  48009241 gtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaatagtcaaatatcatagtaattttac 48009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 38530760 - 38530844
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    ||||||||||||| |||||||||||||||  | ||||||||| ||| | |||||| ||||||||| ||  |||||||||||||||    
T  38530760 ttttaaaatgagtgtcgctttagccaattatatacagattaagaaatgaaataaagtagtcaaatgtcgcagcaattttactaaa 38530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 9333305 - 9333218
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| |||| ||||||  | |||||||||  || | |||||| ||||||||| |||||||||||||||||||| |||||    
T  9333305 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaacct 9333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 9357078 - 9356991
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| |||| ||||||  | |||||||||  || | |||||| ||||||||| |||||||||||||||||||| |||||    
T  9357078 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaacct 9356991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 11134387 - 11134470
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    ||||||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| ||||  || |||||||||||||    
T  11134387 aaaatgagtgtcgttttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatgacagttttactaaaata 11134470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 31491680 - 31491771
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || |||||||||||||| ||| |||||| ||||||| ||| ||| |  || |||||||| ||||||||| |||||||||||||||    
T  31491680 tactctctccgttttaaaatgagtgtcgttttagcaaattgcaaacatattcaggaatggaataaagtagtcaaatgtcatagcaattttac 31491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 40717283 - 40717370
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    ||||||||| ||| ||| ||||  |||||||||||| ||||   || |||||||| ||||||||||||||||||||||||| ||||||    
T  40717283 ttttaaaataagtgtcgttttaatcaattgcacacatattacggaatggaataaagtagtcaaatatcatagcaattttaccaaaata 40717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 43755257 - 43755199
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaata 206  Q
    |||||||||||||| ||||||||||||||||||||||||||| | || ||||| |||||    
T  43755257 gttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaata 43755199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 25152041 - 25151960
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||| ||| || ||||| |||||||||||||||||||| ||  ||||||| ||||||||| |||||| ||||||||    
T  25152041 gtttcaaaataagtgtcactttaaccaattgcacacagattaaagaatagaataaagtagtcaaatgtcatagtaattttac 25151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 84430 - 84482
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaa 84482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 9552269 - 9552366
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||||||||| ||| |||  |||| |||||| ||| |||||||  || | |||||| ||||||||| |||||||||||||||||||||||    
T  9552269 tactccatccgttttaaaataagtgtcg--ttagtcaattgtacatagattaatgaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 9552366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 52125045 - 52125137
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||||||||||||| ||| |||||||||||| | ||| | ||| ||| | |||||| ||||||||| || ||||||||||||    
T  52125045 ttactccatccgttttaaaatgagtgtcgttttagccaattgtatacataataagaaatgtaataaagtagtcaaatgtcgtagcaattttac 52125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 5463816 - 5463725
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||| | |||||  || | |||||| ||||||| | ||||| |||||||||    
T  5463816 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgcaataaagtagtcaattgtcataacaattttac 5463725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 10843021 - 10842930
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| ||| ||||| |||||||||| | |||||  || | |||||| ||||||||| |||||||||||||||    
T  10843021 tactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10842930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 28751317 - 28751372
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||  ||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  28751317 tattactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 28751372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 35847846 - 35847937
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| ||||| |||||||| ||||||||  |||||||||||| |||||  ||  ||||||| ||||||||| ||||| |||||||||    
T  35847846 tactccatccgttttgaaatgagtgtcgctttactcaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 35847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 45749408 - 45749479
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaata 206  Q
    |||||||| ||| |||||||||||||| |||||||| | ||||||||||| |||| | || |||||||||||    
T  45749408 tattactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaata 45749479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 49426329 - 49426420
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| ||||||||| |||||||||||| |||||  || ||||| || ||||||||| | ||| |||||||||    
T  49426329 tactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatggaatgaagtagtcaaatgtgatatcaattttac 49426420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 43358134 - 43358215
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||| | ||| ||||| |||||| ||| | |||||  || | |||||||||||||||| |||||||||||||||    
T  43358134 gttttaaaatgaatgtcgttttagtcaattgtacatatattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 43358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 48025174 - 48025255
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||  || |||||||| ||||||||||||| ||||   || |||||||| |||||||||||  ||||||||||||    
T  48025174 gttttaaaataggtgtcgctttaaccaattgcacacacattatggaatggaataaagtagtcaaatattgtagcaattttac 48025255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 48319927 - 48319979
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaat 200  Q
    |||| ||||||||| |||||||||||||||||||||| ||||| ||| |||||    
T  48319927 gtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaat 48319979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 17805765 - 17805808
Alignment:
Q  147 tgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  17805765 tgtttcaaaatgagtgtcgctttagccaattgcacgcagattaa 17805808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 48259772 - 48259827
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||  || |||| ||||||||| ||| ||||||||||||||||||||||||    
T  48259772 tattactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 48259827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 6377208 - 6377242
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcaca 182  Q
    |||||||||||||| ||||||||||||||||||||    
T  6377208 gttttaaaatgagtgtcgctttagccaattgcaca 6377242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 13408256 - 13408298
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  13408256 gttttaaaatgagtgtcgttttagccaattgcacacaaattaa 13408298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 9915675 - 9915594
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| ||| |||||| |||  |||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  9915675 gtttcaaaatgagtgtcgttttagctaataacacacatattaaggaatgtaataaagtagtcaaatgtcatagcaattttac 9915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 15646992 - 15647037
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  15646992 tctgttttaaaatgagtgtcgttttagtcaattgcacacaaattaa 15647037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 44024758 - 44024685
Alignment:
Q  167 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||  |||||  ||||| ||| | |||||| |||| |||| | ||||||||||||||||||||||||    
T  44024758 tttagccaataacacacgcattaagaaatgtaataaagtagttaaatgttatagcaattttactaaaataacct 44024685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 12851972 - 12851920
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||| ||| |||||||||| ||| ||||||||||||||| |||| |||||||    
T  12851972 tactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaa 12851920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 46286743 - 46286819
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||| ||||  |||||||||||| ||||| |||  ||||||| ||| ||||| |||||||| ||||||    
T  46286743 aaaatgagtgtcgttttaatcaattgcacacatattaagaaatagaataaagtagacaaatgtcatagcacttttac 46286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 50094464 - 50094380
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| |||||||||||| |||||||| |||||||||| || |||||  ||  ||||||| |||| |||| | |||| ||||||||    
T  50094464 tctgatttaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaagtagttaaatgtaatagtaattttac 50094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 19906645 - 19906553
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||  || |||||||||||||||||| ||||||||||||||||||||||||||    
T  19906645 gtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtcaaatgtcatagcaattttactaaaataacct 19906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 32345756 - 32345848
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  32345756 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataacct 32345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 36446981 - 36447081
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||||||||||    
T  36446981 tactccatctgttttaaaatgagtgttgctttagacaattgcacacaaattaatgaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 36447080  T
Q  238 c 238  Q
    |    
T  36447081 c 36447081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 39117410 - 39117502
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  39117410 gttttaaaatgagtgtcgctttatccacttgcacacagattaaagaatggaataaagtagtcaaatgtcataacaattttactaaaataacct 39117502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 37815955 - 37815874
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| |||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||    
T  37815955 gttttaaaatgagtgtcgttttagccaattgcacacatattaaagaatggaataaaatagtcaaatgtcatagcaattttac 37815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 45933509 - 45933589
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    |||||||||||||| |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  45933509 gttttaaaatgagtgtcgctttagccacttgcacacagattaaggaattgaataaaatagtcaaatatcatagcaatttta 45933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 23155372 - 23155463
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||| |||| |||| |||||||||||||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttagccaattgcatacagattaaagaattgaataaagtagttaaatgtcatagcaattttac 23155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 6522050 - 6521958
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| ||||| ||||||||||||||    
T  6522050 gttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataacct 6521958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 26963722 - 26963620
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||| ||| |||| ||||||||| | |||||| ||| || |||||| ||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  26963722 tactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataa 26963623  T
Q  238 cct 240  Q
    |||    
T  26963622 cct 26963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 42879841 - 42879935
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| || |||| ||||||||||||| |||||||||||||||||||||||| |||  || |||||||| ||| ||||| |||||||||||||||    
T  42879841 tattattccatctattttaaaatgagtgtcgctttagccaattgcacacagagtaaggaatggaataaagtaggcaaatgtcatagcaattttac 42879935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 1742222 - 1742141
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  1742222 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 1742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 44453364 - 44453283
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| |||||||||||||| |||||||||| || |||||||| ||||||||| ||||| |||||||||    
T  44453364 gttttaaaatgagtgtcgttttagccaattgcatacagattaaagaatggaataaagtagtcaaatgtcataacaattttac 44453283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 35778060 - 35777969
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  35778060 tactctctccgttttaaaatgagtatcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 35777969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 13405034 - 13405128
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||  ||||||||||||||||| ||| |||| ||||||||||||| ||||| ||| | |||||| ||||||||| || ||||||||||||    
T  13405034 tattactccttctgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaataaagtagtcaaatgtcgtagcaattttac 13405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 23935652 - 23935571
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||| ||||||| || || |||||| || |||||||| ||||||||| |||||||||||||||    
T  23935652 gttttaaaatgagtgtcgctttacccaattgtacccacattaaagaatggaataaagtagtcaaatgtcatagcaattttac 23935571  T

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Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 29530855 - 29530936
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||   |||||| ||||||||| |||||||||||||||    
T  29530855 gttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaataaagtagtcaaatgtcatagcaattttac 29530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 27947410 - 27947506
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    |||||| ||| |||| ||||||||| || ||||| ||||||||||||| |||||  ||  ||||||| ||||||||| |||||||||||||||||||    
T  27947410 ttactccatccgtttcaaaatgagtgtcactttaaccaattgcacacatattaatgaattgaataaagtagtcaaatgtcatagcaattttactaaa 27947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 16564723 - 16564801
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 226  Q
    |||||||||||||| |||||||| ||||||||| |||||||||  || | |||||| ||||||||| ||||||||||||    
T  16564723 gttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16564801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 16600939 - 16600861
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 226  Q
    |||||||||||||| |||||||| ||||||||| |||||||||  || | |||||| ||||||||| ||||||||||||    
T  16600939 gttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 48684967 - 48684873
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||  || |||||||||||||| ||||||||  ||||||||||||||||||  || | |||||| ||||||||| ||||| |||||||||    
T  48684967 tattactccctcagttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 48684873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 7795152 - 7795244
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| ||| |||| ||||||||| |||||||||||||||| ||||| |||||  || | |||||| |||| |||| |||||||||||||||    
T  7795152 ttactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaataaagtagtaaaatgtcatagcaattttac 7795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 10599604 - 10599513
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || |||||||||||||| ||| ||||  |||||||||| | |||||  || |||||||| ||||||||| |||||||||||||||    
T  10599604 tactctctccgttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 10599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 27936008 - 27935917
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||  ||  ||||||| ||||||||  ||||| |||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttagccaactgcacacagattaaggaattgaataaagtagtcaaaagtcataacaattttac 27935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 31418433 - 31418511
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 226  Q
    |||||||||| ||| ||||||||  |||||||||| | ||||| ||| |||||||| ||||||||| ||||||||||||    
T  31418433 gttttaaaataagtgtcgctttaatcaattgcacatatattaagaaatggaataaagtagtcaaatgtcatagcaattt 31418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 36915610 - 36915512
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    |||||| || |||||||||||||| ||| |||||||| || |||| |||||||  || | ||| |  |||||||||||||||||||||||||| |||||    
T  36915610 tactctctccgttttaaaatgagtgtcgttttagccattttcacatagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaata 36915512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 22298235 - 22298146
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaa-----taaaatagtcaaatatcatagcaattttac 229  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||  || ||||     |||| ||||||||| |||||||||||||||    
T  22298235 tctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatggaataaagtaaagtagtcaaatgtcatagcaattttac 22298146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 41137954 - 41137878
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||  |||||  ||||||||| | ||||||||| |||||||| ||||||||| |||||||||||||||    
T  41137954 aaaatgagtgtcattttagtgaattgcacatatattaaaaaatggaataaagtagtcaaatgtcatagcaattttac 41137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 8334214 - 8334293
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttt 227  Q
    |||||||| || || ||| ||| |||||||||||||||||||| ||| | |||||| ||||||||| ||||| |||||||    
T  8334214 gttttaaattgtgtgtcgttttcgccaattgcacacagattaagaaatgtaataaagtagtcaaatgtcataacaatttt 8334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 19276543 - 19276629
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||| ||| ||||||||||||||||||||||||||||  || | | |||| ||||||||| | ||||||| |||||| |||||||||    
T  19276543 aaaatcagtgtcgctttagccaattgcacacagattaaggaatgaagtaaagtagtcaaatgttatagcaa-tttacttaaataacct 19276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 10684801 - 10684843
Alignment:
Q  198 aataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  10684801 aataaaatagttaaatatcataacaattttactaaaataacct 10684843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 42121768 - 42121731
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  42121768 aaaatgagtgtcgctttagccaattgcacacagattaa 42121731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 45948550 - 45948631
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||| ||||| ||||  |||||| ||||  |||  ||||||| ||||||||| |||||||||||||||    
T  45948550 gttttaaaatgagtgtcgttttagtcaatcacacacatattacgaaatagaataaagtagtcaaatgtcatagcaattttac 45948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 31416669 - 31416761
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||||||||||||| | || ||||||| ||||||||||  |||||  || | |||||| || |||||| ||| | |||||||||||||||||    
T  31416669 tctgttttaaaatgattgtcactttagctaattgcacacgaattaaggaatgaaataaagtaatcaaatgtcaaaacaattttactaaaataa 31416761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 29001512 - 29001575
Alignment:
Q  174 aattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||| ||||| ||||||  ||||||||||| |||| ||||||||||| ||||||| ||||||||    
T  29001512 aattacacaccgattaagtaacggaataaagtagttaaatatcatagaaattttaataaaataa 29001575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 40339702 - 40339647
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||| ||| ||||||||||  || ||| ||||||||||||||||||||||||    
T  40339702 tattactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaa 40339647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 5723229 - 5723175
Alignment:
Q  136 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||| ||| |||||||||||||| ||| ||||| |||||||||||| |||||    
T  5723229 attactccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaa 5723175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 40207299 - 40207351
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||| ||| |||| ||||||||| | |||||||||||||||||||| |||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaa 40207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 14541669 - 14541760
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||||||  |||||||||||||| |||||||||| || |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  14541669 ttttaaaatgagtatcattttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacct 14541760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 8471489 - 8471397
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| ||| | |||||| ||||||||| ||||| ||||||||||||||||||||    
T  8471489 gtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaataacct 8471397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 34461504 - 34461593
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    |||| ||||||||| |||||||||||||||| |||||||||||  || | |||||||||||||||| ||||| |||||||||||||||||    
T  34461504 gtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaatagtcaaatgtcataacaattttactaaaataa 34461593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 34168134 - 34168226
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||| ||||||||| ||||||||||||||| ||||| ||||||  ||  ||||||| ||||||||| ||||||||||||||||||||||||||    
T  34168134 gtttcaaaatgagtgtcgctttagccaattacacacggattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataacct 34168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 4760471 - 4760562
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| |||||||  || | |||||| ||||||||| |||||||||||||||    
T  4760471 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 4760562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 18673022 - 18673113
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| ||||| ||||||||| |||||| ||||| ||| | |||||| ||||||||| ||||| ||||||||||||||||||||    
T  18673022 ttttaaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataacct 18673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 9880423 - 9880504
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||| ||||||||||||||||||| ||| |||||||| | ||||||| |||||||||||||||    
T  9880423 gtttcaaaatgagtgtcgctttaaccaattgcacacagattaagaaatggaataaagtggtcaaatgtcatagcaattttac 9880504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 4989704 - 4989630
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttt 227  Q
    ||||||||| |||||||| ||||||||| ||| |||||| || |||||||| |||||||||||||||||||||||    
T  4989704 aaaatgagtttcgctttaaccaattgcatacatattaaagaatggaataaagtagtcaaatatcatagcaatttt 4989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 39463488 - 39463407
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| || ||||||||||||    
T  39463488 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 39463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 27416733 - 27416641
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||| |||||||| |||||| || ||||||||| ||||||||  ||   |||||| ||||||||| ||||||||||||||||||||||||||    
T  27416733 gtttttaaatgagtgtcgcttcagtcaattgcacgcagattaaggaatataataaagtagtcaaatgtcatagcaattttactaaaataacct 27416641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 9304556 - 9304637
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| ||  |||||||||||||||||| | ||| |||  |||||||||||| |||| |||||||||||||||    
T  9304556 gttttaaaatgagtgtcattttagccaattgcacacataataagaaattgaataaaatagttaaatgtcatagcaattttac 9304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 9022626 - 9022574
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaat 200  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| |||||    
T  9022626 gttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaat 9022574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 11168914 - 11168826
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 236  Q
    |||| ||||||||| |||||||||||| || ||||||||||||  || | ||| |  |||||||||||||||||||||||||| |||||    
T  11168914 gtttcaaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaata 11168826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 13109198 - 13109127
Alignment:
Q  169 tagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||||| |||||  || | ||||||||| |||||| |||||| |||||||||||||||||||    
T  13109198 tagccaattgcacacaaattaaggaatgaaataaaatattcaaatgtcatagtaattttactaaaataacct 13109127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 5790566 - 5790649
Alignment:
Q  148 gttttaaaatgagtat--cgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| |||||||||||  ||||||||   |||||| ||||||||| |||  |||||||||||||||||||| ||||||||||||    
T  5790566 gtttcaaaatgagtatgtcgctttagttgattgcatacagattaagaaatagaataaaatagtcaaatatcgtagcaattttac 5790649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 17921171 - 17921107
Alignment:
Q  165 gctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||| ||||||||||||||| |||||  ||  ||||||||||||||||| |||||||||||||||    
T  17921171 gcttaagccaattgcacacatattaaggaattgaataaaatagtcaaatgtcatagcaattttac 17921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 39698585 - 39698669
Alignment:
Q  145 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||||||||||| || |||||| |||||||||||| |||||   | | |||||| ||||||||| | |||||||||||||    
T  39698585 tctgttttaaaatgagtgtctctttaggcaattgcacacatattaaggtatgaaataaagtagtcaaatgttatagcaattttac 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 32326647 - 32326689
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  32326647 gttttaaaatgagtgtcgctttagtcaattgcacacagattaa 32326689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 43084536 - 43084630
Alignment:
Q  135 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| ||  ||||||||| ||| || |||||| |||||||||||| |||||  || | |||||| ||||||||| |||||| ||||||||    
T  43084536 tattactctctccattttaaaataagtgtcactttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 43084630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 4530107 - 4530055
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||| ||| |||| ||||||||| ||| ||||||||||||||||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 4530055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 31899160 - 31899251
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| |||| ||| ||||||||| |||||||||||||||||||| | |||||  || | |||||| | ||| ||| ||||| |||||||||    
T  31899160 tactccatctatttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagttgtcgaatgtcataacaattttac 31899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 8106811 - 8106853
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaa 191  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||    
T  8106811 ttttaaaatgagtatcgatttagtcaattgcacacaaattaaa 8106853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 38328977 - 38329019
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  38328977 gtttcaaaatgagtttcgctttagtcaattgcacacagattaa 38329019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 45187226 - 45187260
Alignment:
Q  156 atgagtatcgctttagccaattgcacacagattaa 190  Q
    |||||| ||||||||||||||||||||||||||||    
T  45187226 atgagtgtcgctttagccaattgcacacagattaa 45187260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 8382398 - 8382467
Alignment:
Q  137 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaata 206  Q
    |||||| ||| |||||||||||||| ||| |||||| ||||||||| | |||||| || | |||||||||    
T  8382398 ttactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaata 8382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 31693545 - 31693626
Alignment:
Q  152 taaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 233  Q
    |||||||| | ||||||||||||| ||||||||  ||||  ||   |||||| ||||||||| ||||| |||||||||||||    
T  31693545 taaaatgaatgtcgctttagccaactgcacacatgttaaggaatataataaagtagtcaaatgtcataacaattttactaaa 31693626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 6992631 - 6992541
Alignment:
Q  150 tttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||   ||||||| |||||||||||||||||| ||| | ||||||||||||||| ||||||| |||||||||||||||||||    
T  6992631 tttaaaatgagtggtgctttagtcaattgcacacagattaagaaatgaaataaaatagtcaaacatcatagtaattttactaaaataacct 6992541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 25932861 - 25932769
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||| ||| ||| ||||||||||| ||||| |||||| ||| | |||||| |||| |||| ||||||||||||||||||||||||||    
T  25932861 gttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataacct 25932769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 17345061 - 17345148
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||||||| |||||||||||||||||||||    |||  || |||||||| ||||| ||| ||||||||||||||||||||||||||    
T  17345061 ttttaaaatgagtgtcgctttagccaattgcacac----taaggaatggaataaagtagtcgaatgtcatagcaattttactaaaataacct 17345148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 6143326 - 6143226
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||||||||||||| ||| |||   ||||| || |||||||| ||||||||||||| | |||||| ||| ||||| | |||||||||||||||||||||    
T  6143326 tactctatctgtttttaaacgagggacgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataa 6143227  T
Q  238 c 238  Q
    |    
T  6143226 c 6143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 24163625 - 24163716
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacaca-gattaaaaaacggaataaaatagtcaaatatcatagcaatttta 228  Q
    ||||| ||| |||||||| ||||| ||| ||||||||||||||||||  ||||| ||| | |||||||||||||||| ||||||||||||||    
T  24163625 tactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaatagtcaaatgtcatagcaatttta 24163716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 19675209 - 19675128
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||  ||  ||||||| ||||||||| |||||||||||||||    
T  19675209 gttttaaaatgagtgtcgctttaaccaattgaacacatattaaggaattgaataaagtagtcaaatgtcatagcaattttac 19675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 6140841 - 6140741
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 237  Q
    ||||||||||||||| |||  ||   ||||| || |||||||| ||||||||||||| | |||||| ||| ||||| | |||||||||||||||||||||    
T  6140841 tactctatctgtttttaaactagggacgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataa 6140742  T
Q  238 c 238  Q
    |    
T  6140741 c 6140741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 1135166 - 1135075
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||| || |||| ||||| ||| | |||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  1135166 tactctctccgtttcaaaataagtgttgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatatcaattttac 1135075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 10520316 - 10520393
Alignment:
Q  152 taaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    |||||||||| |||||||| ||||||| ||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  10520316 taaaatgagtgtcgctttaaccaattgtacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 23259247 - 23259328
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| |||||| | |||||||||| ||||||||||||||||| ||| | |||||| ||||||||| || || |||||||||    
T  23259247 gttttgaaatgaatttcgctttagctaattgcacacagattaagaaatgaaataaagtagtcaaatgtcgtaacaattttac 23259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 24555854 - 24555930
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| |||||||| | ||||||| ||||||||| |||  ||||||| ||||||||| || ||||||||||||    
T  24555854 aaaatgagtgtcgctttaacaaattgcatacagattaagaaatagaataaagtagtcaaatgtcgtagcaattttac 24555930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 26189733 - 26189649
Alignment:
Q  156 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||| ||||||||| ||||||||||||  ||||  || | |||||| |||| |||| ||||||||||| ||||||||||||||    
T  26189733 atgagtgtcgctttagacaattgcacacatgttaaggaatgaaataaagtagttaaatgtcatagcaattatactaaaataacct 26189649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 9940873 - 9940836
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaa 190  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  9940873 aaaatgagtattgttttagccaattgcacacagattaa 9940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 29713328 - 29713393
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 213  Q
    |||||||||||||| ||||||||| |||||||||||  |||||  || ||||| || |||||||||    
T  29713328 gttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaatggaatcaagtagtcaaat 29713393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 234256 - 234196
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagt 208  Q
    |||| ||||||||| ||| |||| |||||||||||| ||||||| || |||||||| ||||    
T  234256 gtttcaaaatgagtgtcgttttaaccaattgcacacggattaaagaatggaataaagtagt 234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 34513580 - 34513652
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatag 220  Q
    |||||||||| ||| ||| |||||| ||||||||||| ||||| ||| |||||||| |||  |||| ||||||    
T  34513580 gttttaaaataagtgtcgttttagctaattgcacacatattaagaaatggaataaagtagctaaatgtcatag 34513652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 24652 - 24743
Alignment:
Q  138 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||| ||| |||||||||||||| |||||||||||| ||| ||||| |||||  || |||||||||||||||||| |||||||||||||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataaaatagtcaaatgtcatagcaattttac 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 321953 - 321866
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    ||||||||| |||||||||| |||||||||| | ||||  || |||||||| |||||||||||||||| |||||||||||||||||||    
T  321953 aaaatgagtgtcgctttagctaattgcacacgggttaaggaatggaataaagtagtcaaatatcatagtaattttactaaaataacct 321866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 70375 - 70467
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacct 240  Q
    |||||||||||||| ||||| || ||||||||| ||||||||| |||  ||||||| ||||||||| ||||  ||||||||||||||||||||    
T  70375 gttttaaaatgagtgtcgctataaccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatgacaattttactaaaataacct 70467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 62859 - 62783
Alignment:
Q  153 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
    ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  62859 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcataacaattttac 62783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 1371 - 1448
Alignment:
Q  149 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 226  Q
    ||||||||||||| || |||||| ||||||||||||||||||  || | |||||| ||||||||| ||||||||||||    
T  1371 ttttaaaatgagtgtcactttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 21003 - 21084
Alignment:
Q  148 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 229  Q
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T  21003 gttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaatagtcaaacgtcatagcaattttac 21084  T

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