View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10849_4 (Length: 460)
Name: NF10849_4
Description: NF10849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10849_4 |
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Alignment Details
Target: chr7 (Bit Score: 418; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 21 - 442
Target Start/End: Complemental strand, 20923072 - 20922651
Alignment:
| Q |
21 |
gacttaatacacgacatatctttagtcattcacgatacaccctagtcgtattaggataagtataattacccacctgaatcacttctagaacttatctctt |
120 |
Q |
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| T |
20923072 |
gacttaatacacgacatatctttagtcattcacgatacaccctagtcgtattaggataagtataattacccacctgaatcacttctagaacttatctctt |
20922973 |
T |
|
| Q |
121 |
aaggaaaaaacatacttcgtctttgtataacactgtgttagctactggaatatgaaacaaattatcccatctttcttagtcttgcattaatatcttaaat |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20922972 |
aaggaaaaaacatacttcgtctttgtataacactgtgttagctactggaatatgaaacaaattatcccatctttcttagtcttgcattaatatcttaaat |
20922873 |
T |
|
| Q |
221 |
atgcacagtcccataccttaggtcacatatgatttccaatttgtgataacgttcttttccgtaccttcgtaacattgagtttaaactctctaactaatat |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
20922872 |
atgcacagtcccataccttaggtcacatatgatttccaatttgtgataacgttcttttctgtaccttcgtaacattgagtttaaactctctaactaatat |
20922773 |
T |
|
| Q |
321 |
gtgttcggtatcttcgatcctgctccgagtgctatcttcctgctcatatacctgcaactatacttgacattttcggatggcacttcgagtcgaaagtaaa |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20922772 |
gtgttcggtatcttcgatcctgctccgagtgctatcttcctgctcatatacctgcaactatacttgacattttcggatggcacttcgagtcgaaagtaaa |
20922673 |
T |
|
| Q |
421 |
atcctccagatacaaccttcat |
442 |
Q |
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|||||||||||||||||||||| |
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| T |
20922672 |
atcctccagatacaaccttcat |
20922651 |
T |
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