View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10849_7 (Length: 332)
Name: NF10849_7
Description: NF10849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10849_7 |
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Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 12 - 313
Target Start/End: Complemental strand, 42738786 - 42738485
Alignment:
| Q |
12 |
atgaatgttaacaatgaaactggaaaaaagaagaatgaaaaggaagagaagggtatataccgtattgtttcctccagtgttgaaaatatgggaacagagc |
111 |
Q |
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| T |
42738786 |
atgaatgttaacaatgaaactggaaaaaagaagaatgaaaaggaagagaagggtatataccgtattgtttcctccagtgttgaaaatatgggaacagagc |
42738687 |
T |
|
| Q |
112 |
tgcagagtaatcataagctagaaactgatcattatctttggaaatattgctagcttgcgatgtaattctctgcatatcaggtagattcccatgtagaaaa |
211 |
Q |
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| T |
42738686 |
tgcagagtaatcataagctagaaactgatcattatctttggaaatattgctagcttgcgatgtaattctctgcatatcaggtagattcccatgtagaaaa |
42738587 |
T |
|
| Q |
212 |
gaagaaggtggaggccctctaataccttgcattctgagctttcttcttaccctttgggacttataccacaaagtgccataaatataaaaaatccagctca |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
42738586 |
gaagaaggtggaggccctctaataccttgcattctgagctttcttcttaccctttgggaattataccacaaagtgccataaatataaaaaatccagctca |
42738487 |
T |
|
| Q |
312 |
aa |
313 |
Q |
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|| |
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| T |
42738486 |
aa |
42738485 |
T |
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