View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1084_high_37 (Length: 326)
Name: NF1084_high_37
Description: NF1084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1084_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 30 - 317
Target Start/End: Original strand, 6265916 - 6266203
Alignment:
| Q |
30 |
attttcacacacaattctatccctatctcttctccatttgcatcctctccaactcagaggaacatatgcagaatattctcacttagaataaaaaattgta |
129 |
Q |
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| T |
6265916 |
attttcacacacaattctatccctatctcttctccatttgcatcctctccaactcagaggaacatatgcagaatattctctcttagaataaaaaattgta |
6266015 |
T |
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| Q |
130 |
ctaaaatgataattgtaatcagtcaatttaaaagacgcattgttcctctttttcagatcttatattgaccgtttatattttgtttgtttaagggttgttt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
6266016 |
ctaaaatgataattgtaatcagtcaatttaaaagacgtattgttcccctttttcggatcttatattgaccgtttatattttgtttgtttaatggttgttt |
6266115 |
T |
|
| Q |
230 |
atactcttctctaatccttttggtaatggtaattttattaagcaactggaaccaatttaaagtttctagagttcgacttaacctttgc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6266116 |
atactcttctctaatccttttggtaatggtaattttattaagcaactggaaccaatttaaagtttctagagttcgacttaacctttgc |
6266203 |
T |
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