View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1084_low_10 (Length: 531)

Name: NF1084_low_10
Description: NF1084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1084_low_10
NF1084_low_10
[»] chr8 (53 HSPs)
chr8 (14-502)||(18321932-18322421)
chr8 (14-103)||(18679100-18679189)
chr8 (14-103)||(18718289-18718378)
chr8 (14-104)||(15336864-15336956)
chr8 (14-104)||(15425929-15426021)
chr8 (14-104)||(15517233-15517325)
chr8 (14-104)||(19942517-19942611)
chr8 (14-104)||(25163353-25163446)
chr8 (12-104)||(9319854-9319946)
chr8 (30-104)||(13431411-13431487)
chr8 (24-104)||(23185531-23185615)
chr8 (152-257)||(11755405-11755511)
chr8 (14-104)||(20256288-20256381)
chr8 (31-104)||(14990272-14990342)
chr8 (14-60)||(17526512-17526558)
chr8 (47-96)||(20383162-20383211)
chr8 (47-104)||(30422242-30422299)
chr8 (47-104)||(43639036-43639093)
chr8 (14-104)||(18771975-18772067)
chr8 (153-258)||(37232106-37232213)
chr8 (14-104)||(15934437-15934527)
chr8 (57-104)||(16206513-16206560)
chr8 (33-104)||(14990885-14990957)
chr8 (47-104)||(18121943-18122001)
chr8 (31-105)||(36104625-36104698)
chr8 (154-271)||(14180429-14180546)
chr8 (47-104)||(17796699-17796756)
chr8 (47-104)||(22673058-22673114)
chr8 (57-104)||(17442669-17442716)
chr8 (31-103)||(45292129-45292203)
chr8 (14-96)||(16682029-16682114)
chr8 (14-75)||(19957113-19957177)
chr8 (153-258)||(31431016-31431122)
chr8 (49-101)||(1744480-1744533)
chr8 (14-55)||(12758512-12758553)
chr8 (14-55)||(16206605-16206646)
chr8 (171-212)||(16591160-16591201)
chr8 (14-55)||(18121884-18121925)
chr8 (47-104)||(18152516-18152572)
chr8 (14-55)||(20383113-20383154)
chr8 (47-104)||(22662353-22662409)
chr8 (14-55)||(26832410-26832451)
chr8 (47-104)||(40846215-40846272)
chr8 (178-258)||(2813456-2813536)
chr8 (31-104)||(6407042-6407116)
chr8 (19-55)||(19153368-19153404)
chr8 (61-101)||(23264453-23264493)
chr8 (175-271)||(32856232-32856327)
chr8 (47-97)||(21932165-21932215)
chr8 (171-213)||(26079607-26079649)
chr8 (58-104)||(45539307-45539353)
chr8 (14-42)||(17928436-17928464)
chr8 (14-42)||(25850764-25850792)
[»] chr4 (60 HSPs)
chr4 (19-104)||(23749811-23749896)
chr4 (14-103)||(55379598-55379687)
chr4 (14-104)||(19665651-19665742)
chr4 (14-104)||(23120823-23120914)
chr4 (14-95)||(14605639-14605720)
chr4 (47-104)||(13576915-13576972)
chr4 (47-104)||(22676327-22676384)
chr4 (24-104)||(29120653-29120732)
chr4 (31-104)||(3106169-3106240)
chr4 (171-292)||(6008414-6008535)
chr4 (14-105)||(8686177-8686267)
chr4 (47-104)||(17246895-17246952)
chr4 (153-261)||(40217889-40217998)
chr4 (32-104)||(3500402-3500477)
chr4 (31-104)||(22190131-22190206)
chr4 (24-98)||(8103580-8103651)
chr4 (14-69)||(29681250-29681305)
chr4 (14-69)||(37986346-37986401)
chr4 (28-103)||(19621730-19621813)
chr4 (36-108)||(16847668-16847741)
chr4 (47-103)||(16852758-16852815)
chr4 (47-104)||(17399447-17399504)
chr4 (47-104)||(54679146-54679203)
chr4 (158-257)||(4776084-4776184)
chr4 (57-104)||(24628674-24628721)
chr4 (224-295)||(49195937-49196008)
chr4 (14-96)||(6640983-6641062)
chr4 (47-104)||(15135004-15135062)
chr4 (14-69)||(16631760-16631817)
chr4 (43-101)||(27189410-27189467)
chr4 (24-104)||(37436277-37436354)
chr4 (47-104)||(56033813-56033873)
chr4 (47-104)||(10071789-10071846)
chr4 (20-86)||(15475887-15475955)
chr4 (171-260)||(19721396-19721484)
chr4 (14-55)||(19884069-19884110)
chr4 (21-96)||(15560563-15560644)
chr4 (153-204)||(28101750-28101802)
chr4 (14-96)||(22089575-22089663)
chr4 (57-104)||(44397494-44397541)
chr4 (14-96)||(45832677-45832764)
chr4 (171-213)||(4110102-4110144)
chr4 (55-97)||(10072182-10072224)
chr4 (171-213)||(45662012-45662054)
chr4 (47-101)||(55731118-55731172)
chr4 (14-55)||(3394986-3395027)
chr4 (14-55)||(11900527-11900568)
chr4 (47-103)||(12600041-12600098)
chr4 (14-55)||(14357695-14357736)
chr4 (49-104)||(14905092-14905149)
chr4 (47-104)||(16939263-16939319)
chr4 (14-55)||(17246966-17247007)
chr4 (14-55)||(22676256-22676297)
chr4 (153-209)||(44987599-44987656)
chr4 (178-259)||(47724570-47724650)
chr4 (171-211)||(2242619-2242659)
chr4 (14-42)||(13890184-13890212)
chr4 (31-76)||(40859984-40860031)
chr4 (14-46)||(41115491-41115523)
chr4 (19-55)||(56033909-56033945)
[»] chr5 (48 HSPs)
chr5 (14-104)||(6498601-6498692)
chr5 (19-105)||(21075946-21076034)
chr5 (47-104)||(23880299-23880356)
chr5 (14-104)||(7746452-7746546)
chr5 (14-104)||(6513189-6513280)
chr5 (14-101)||(9399374-9399460)
chr5 (19-96)||(22000790-22000869)
chr5 (31-104)||(35932781-35932856)
chr5 (47-96)||(19546323-19546372)
chr5 (171-259)||(8229500-8229588)
chr5 (14-103)||(643458-643546)
chr5 (14-101)||(17814253-17814343)
chr5 (14-104)||(23413732-23413826)
chr5 (43-104)||(10848058-10848119)
chr5 (47-104)||(31487495-31487552)
chr5 (171-262)||(2627779-2627870)
chr5 (49-104)||(31146398-31146453)
chr5 (24-101)||(37395457-37395534)
chr5 (14-58)||(26766593-26766637)
chr5 (47-103)||(30742227-30742283)
chr5 (52-103)||(12353661-12353712)
chr5 (49-104)||(35987019-35987074)
chr5 (14-53)||(39799598-39799637)
chr5 (47-101)||(33932557-33932611)
chr5 (55-104)||(90234-90283)
chr5 (153-252)||(7057334-7057435)
chr5 (24-104)||(11993175-11993258)
chr5 (51-104)||(28138885-28138937)
chr5 (47-104)||(29139216-29139272)
chr5 (15-55)||(16606854-16606894)
chr5 (14-104)||(31117162-31117258)
chr5 (57-104)||(3246266-3246313)
chr5 (14-104)||(13546279-13546377)
chr5 (47-101)||(26783627-26783682)
chr5 (24-104)||(33021946-33022032)
chr5 (171-261)||(19099736-19099825)
chr5 (55-104)||(13736907-13736956)
chr5 (14-55)||(21100461-21100502)
chr5 (14-55)||(21207534-21207575)
chr5 (20-86)||(21659518-21659586)
chr5 (32-86)||(23407421-23407477)
chr5 (14-55)||(25097584-25097625)
chr5 (47-104)||(28465141-28465197)
chr5 (14-55)||(31487576-31487617)
chr5 (31-70)||(4886289-4886326)
chr5 (14-54)||(25155554-25155594)
chr5 (171-211)||(29230815-29230855)
chr5 (171-258)||(36906979-36907064)
[»] chr7 (78 HSPs)
chr7 (19-104)||(19328795-19328881)
chr7 (14-104)||(21284153-21284245)
chr7 (14-104)||(4832104-4832195)
chr7 (14-104)||(41843203-41843293)
chr7 (12-103)||(13473258-13473357)
chr7 (14-104)||(13681582-13681673)
chr7 (14-103)||(30025222-30025313)
chr7 (14-104)||(15087840-15087929)
chr7 (14-104)||(29936124-29936216)
chr7 (14-104)||(4820772-4820865)
chr7 (14-96)||(10883950-10884033)
chr7 (14-104)||(13645738-13645829)
chr7 (47-104)||(12367571-12367628)
chr7 (14-104)||(16315317-16315408)
chr7 (47-104)||(9710648-9710705)
chr7 (14-101)||(14186976-14187067)
chr7 (14-101)||(33604194-33604285)
chr7 (47-103)||(5001676-5001732)
chr7 (47-102)||(11792159-11792215)
chr7 (47-103)||(16317410-16317466)
chr7 (14-69)||(9069083-9069138)
chr7 (14-69)||(13302184-13302239)
chr7 (24-104)||(14424594-14424678)
chr7 (47-104)||(13259257-13259314)
chr7 (19-104)||(13731459-13731547)
chr7 (30-101)||(12175133-12175202)
chr7 (57-104)||(13138749-13138796)
chr7 (24-104)||(28623149-28623224)
chr7 (31-73)||(330970-331012)
chr7 (171-212)||(7858216-7858257)
chr7 (14-55)||(11318742-11318783)
chr7 (47-103)||(13034666-13034723)
chr7 (55-104)||(13261497-13261546)
chr7 (20-86)||(19711796-19711864)
chr7 (31-101)||(27871007-27871079)
chr7 (47-104)||(33692536-33692593)
chr7 (47-104)||(48237649-48237706)
chr7 (24-101)||(16155529-16155608)
chr7 (24-103)||(16546125-16546207)
chr7 (24-103)||(16619455-16619537)
chr7 (49-104)||(48063627-48063682)
chr7 (21-55)||(2914397-2914431)
chr7 (55-101)||(16310777-16310823)
chr7 (47-101)||(16911696-16911750)
chr7 (14-69)||(24787682-24787739)
chr7 (14-55)||(4493912-4493953)
chr7 (14-55)||(5001605-5001646)
chr7 (14-55)||(13027678-13027719)
chr7 (14-55)||(13034617-13034658)
chr7 (14-55)||(13879507-13879548)
chr7 (47-104)||(14424801-14424858)
chr7 (14-104)||(15467202-15467296)
chr7 (47-104)||(15705308-15705365)
chr7 (32-101)||(19340045-19340117)
chr7 (14-55)||(21211323-21211364)
chr7 (153-261)||(43728252-43728361)
chr7 (47-103)||(44466368-44466425)
chr7 (14-55)||(44466431-44466472)
chr7 (12-75)||(26042727-26042787)
chr7 (47-105)||(2266376-2266435)
chr7 (14-57)||(13138675-13138718)
chr7 (171-214)||(47843501-47843544)
chr7 (21-55)||(9099016-9099050)
chr7 (21-55)||(9099822-9099856)
chr7 (47-104)||(13879430-13879487)
chr7 (30-75)||(14304613-14304661)
chr7 (31-101)||(21382224-21382297)
chr7 (14-55)||(2499400-2499441)
chr7 (14-55)||(11792247-11792288)
chr7 (14-55)||(12367516-12367557)
chr7 (18-55)||(13902395-13902432)
chr7 (14-55)||(16317333-16317374)
chr7 (47-103)||(22580067-22580124)
chr7 (55-104)||(30946228-30946277)
chr7 (47-104)||(35954725-35954782)
chr7 (14-55)||(39285282-39285323)
chr7 (175-204)||(47278272-47278301)
chr7 (49-104)||(48806695-48806751)
[»] chr2 (45 HSPs)
chr2 (14-104)||(26367130-26367220)
chr2 (14-104)||(21537908-21538000)
chr2 (14-103)||(22316881-22316970)
chr2 (153-292)||(7018151-7018291)
chr2 (14-104)||(10010474-10010563)
chr2 (14-101)||(19539703-19539794)
chr2 (14-104)||(39038364-39038453)
chr2 (14-104)||(22455682-22455772)
chr2 (31-104)||(16494633-16494708)
chr2 (19-103)||(22188830-22188919)
chr2 (14-104)||(28141324-28141415)
chr2 (47-96)||(24778626-24778675)
chr2 (31-104)||(44839719-44839794)
chr2 (31-104)||(22801761-22801832)
chr2 (14-101)||(38780686-38780775)
chr2 (31-104)||(40331400-40331471)
chr2 (55-104)||(24851436-24851485)
chr2 (14-96)||(20569473-20569554)
chr2 (20-96)||(24575327-24575406)
chr2 (14-104)||(25188689-25188776)
chr2 (43-104)||(1587787-1587847)
chr2 (31-104)||(28551658-28551734)
chr2 (31-103)||(34322671-34322741)
chr2 (31-104)||(40331075-40331148)
chr2 (47-104)||(40780596-40780653)
chr2 (47-103)||(22782388-22782444)
chr2 (153-257)||(26352922-26353025)
chr2 (32-104)||(22786395-22786469)
chr2 (171-262)||(40498832-40498922)
chr2 (23-70)||(27296764-27296813)
chr2 (171-261)||(40364020-40364110)
chr2 (236-277)||(13085226-13085267)
chr2 (14-55)||(24838442-24838483)
chr2 (14-55)||(25828499-25828540)
chr2 (153-253)||(35429179-35429280)
chr2 (39-98)||(45087744-45087804)
chr2 (30-104)||(6391953-6392024)
chr2 (171-261)||(17329063-17329153)
chr2 (47-104)||(17964058-17964116)
chr2 (58-104)||(28701991-28702037)
chr2 (47-101)||(31968532-31968586)
chr2 (14-69)||(38631072-38631131)
chr2 (14-55)||(23234346-23234387)
chr2 (14-47)||(24376451-24376484)
chr2 (14-55)||(26623176-26623217)
[»] chr3 (78 HSPs)
chr3 (14-104)||(29952213-29952305)
chr3 (14-104)||(30001367-30001459)
chr3 (171-295)||(45472808-45472932)
chr3 (14-103)||(13823360-13823449)
chr3 (19-104)||(25399036-25399123)
chr3 (21-104)||(22804806-22804889)
chr3 (14-104)||(41494291-41494381)
chr3 (15-96)||(20645451-20645535)
chr3 (14-104)||(6090017-6090109)
chr3 (12-104)||(38178417-38178513)
chr3 (30-104)||(2025381-2025455)
chr3 (19-104)||(14968658-14968741)
chr3 (47-104)||(19885889-19885946)
chr3 (14-88)||(12963862-12963938)
chr3 (14-104)||(17239699-17239797)
chr3 (14-104)||(2560474-2560568)
chr3 (33-104)||(30054975-30055044)
chr3 (47-104)||(14393806-14393863)
chr3 (14-88)||(3237998-3238074)
chr3 (31-104)||(40850267-40850342)
chr3 (14-104)||(31302638-31302731)
chr3 (24-104)||(47406209-47406285)
chr3 (34-101)||(50299530-50299597)
chr3 (21-101)||(12727019-12727101)
chr3 (30-104)||(49669281-49669354)
chr3 (47-104)||(19889750-19889807)
chr3 (14-104)||(22128375-22128460)
chr3 (30-104)||(46797188-46797263)
chr3 (24-104)||(52283084-52283161)
chr3 (47-101)||(1241886-1241940)
chr3 (14-69)||(13781363-13781420)
chr3 (14-69)||(13939221-13939278)
chr3 (47-104)||(20628273-20628330)
chr3 (19-104)||(49643544-49643632)
chr3 (24-104)||(53057516-53057593)
chr3 (15-55)||(6174677-6174717)
chr3 (47-103)||(21640128-21640184)
chr3 (49-101)||(22463846-22463898)
chr3 (49-101)||(22465304-22465356)
chr3 (56-104)||(40799179-40799227)
chr3 (19-96)||(8874902-8874985)
chr3 (47-94)||(28581380-28581427)
chr3 (53-104)||(47206952-47207003)
chr3 (157-262)||(52203670-52203774)
chr3 (47-101)||(2782778-2782832)
chr3 (47-101)||(2783168-2783222)
chr3 (43-101)||(9700847-9700904)
chr3 (47-104)||(11189282-11189340)
chr3 (47-104)||(18122458-18122516)
chr3 (58-104)||(24776334-24776380)
chr3 (47-104)||(21639094-21639150)
chr3 (177-258)||(51257724-51257805)
chr3 (153-257)||(21854015-21854118)
chr3 (14-103)||(15902485-15902578)
chr3 (21-55)||(10849932-10849966)
chr3 (47-104)||(16031792-16031850)
chr3 (21-55)||(18122396-18122430)
chr3 (153-210)||(39614797-39614855)
chr3 (49-101)||(1728829-1728882)
chr3 (14-55)||(6252762-6252803)
chr3 (47-104)||(11222085-11222141)
chr3 (47-104)||(11222837-11222893)
chr3 (14-96)||(12967610-12967690)
chr3 (14-55)||(13410814-13410855)
chr3 (14-55)||(19885832-19885873)
chr3 (22-55)||(19889697-19889730)
chr3 (220-257)||(26016118-26016155)
chr3 (14-55)||(26418453-26418494)
chr3 (14-55)||(28581447-28581488)
chr3 (14-104)||(46350623-46350709)
chr3 (67-104)||(49554341-49554378)
chr3 (19-55)||(14393750-14393786)
chr3 (48-104)||(14954699-14954755)
chr3 (19-55)||(19250133-19250169)
chr3 (14-54)||(22770633-22770673)
chr3 (171-211)||(35296686-35296726)
chr3 (178-258)||(36171917-36171996)
chr3 (19-55)||(52919806-52919842)
[»] chr6 (49 HSPs)
chr6 (19-104)||(20113408-20113495)
chr6 (24-104)||(16876195-16876276)
chr6 (14-96)||(19623282-19623362)
chr6 (24-104)||(22801430-22801512)
chr6 (152-258)||(8486266-8486371)
chr6 (14-104)||(21624379-21624474)
chr6 (33-104)||(19066803-19066876)
chr6 (22-104)||(13435172-13435260)
chr6 (171-298)||(2987913-2988040)
chr6 (19-104)||(15986649-15986731)
chr6 (14-104)||(16528602-16528693)
chr6 (14-96)||(25929779-25929861)
chr6 (47-101)||(21234446-21234500)
chr6 (14-69)||(25593394-25593451)
chr6 (47-104)||(16333016-16333073)
chr6 (47-104)||(20731511-20731568)
chr6 (47-104)||(24116105-24116162)
chr6 (14-104)||(29917325-29917410)
chr6 (47-104)||(32543550-32543607)
chr6 (14-104)||(13601454-13601549)
chr6 (14-69)||(15301541-15301598)
chr6 (47-104)||(19952390-19952448)
chr6 (47-104)||(22077177-22077233)
chr6 (47-104)||(33353052-33353109)
chr6 (19-55)||(26941777-26941813)
chr6 (57-104)||(18377714-18377761)
chr6 (14-69)||(14732884-14732941)
chr6 (30-104)||(21617540-21617613)
chr6 (32-101)||(18912704-18912776)
chr6 (47-104)||(19085419-19085476)
chr6 (14-55)||(23296128-23296169)
chr6 (14-55)||(25591964-25592005)
chr6 (19-55)||(18434880-18434916)
chr6 (19-55)||(19085500-19085536)
chr6 (47-103)||(19688021-19688076)
chr6 (57-104)||(12041148-12041195)
chr6 (57-104)||(12422528-12422575)
chr6 (47-104)||(15532434-15532492)
chr6 (58-104)||(17380850-17380896)
chr6 (14-55)||(14101204-14101245)
chr6 (14-55)||(17876783-17876824)
chr6 (14-55)||(19625152-19625193)
chr6 (14-55)||(32335184-32335225)
chr6 (178-258)||(1929240-1929319)
chr6 (171-211)||(2032088-2032128)
chr6 (14-46)||(3680464-3680496)
chr6 (168-260)||(12283464-12283556)
chr6 (21-96)||(17304045-17304120)
chr6 (49-104)||(26588888-26588944)
[»] scaffold0334 (1 HSPs)
scaffold0334 (14-104)||(7184-7276)
[»] scaffold0035 (2 HSPs)
scaffold0035 (14-104)||(20197-20287)
scaffold0035 (47-104)||(110358-110414)
[»] chr1 (51 HSPs)
chr1 (14-101)||(10756723-10756806)
chr1 (14-102)||(26702828-26702917)
chr1 (14-104)||(22600884-22600978)
chr1 (47-104)||(23037258-23037315)
chr1 (18-104)||(1899634-1899725)
chr1 (30-103)||(44824473-44824544)
chr1 (14-100)||(2833947-2834039)
chr1 (30-104)||(21121778-21121854)
chr1 (30-104)||(21983886-21983962)
chr1 (31-104)||(21215391-21215466)
chr1 (31-104)||(46088279-46088354)
chr1 (31-101)||(14264149-14264217)
chr1 (14-104)||(36133498-36133586)
chr1 (152-214)||(16123101-16123163)
chr1 (47-104)||(12283680-12283737)
chr1 (31-104)||(29215087-29215160)
chr1 (31-104)||(21135874-21135949)
chr1 (14-103)||(32786636-32786729)
chr1 (49-104)||(21205596-21205651)
chr1 (47-104)||(1577136-1577194)
chr1 (30-104)||(10250280-10250355)
chr1 (171-260)||(11767467-11767556)
chr1 (47-104)||(30892352-30892409)
chr1 (15-55)||(22465509-22465549)
chr1 (14-104)||(22428036-22428130)
chr1 (47-104)||(2266373-2266430)
chr1 (14-55)||(28492979-28493020)
chr1 (178-271)||(31183803-31183896)
chr1 (14-55)||(33257049-33257090)
chr1 (14-55)||(33277221-33277262)
chr1 (14-55)||(38281907-38281948)
chr1 (47-104)||(48570987-48571044)
chr1 (19-55)||(22202437-22202473)
chr1 (19-55)||(30892435-30892471)
chr1 (171-271)||(41828018-41828117)
chr1 (178-258)||(50709801-50709880)
chr1 (171-214)||(271319-271362)
chr1 (47-104)||(22153113-22153172)
chr1 (47-104)||(22202493-22202551)
chr1 (47-104)||(22202615-22202673)
chr1 (21-55)||(23053716-23053750)
chr1 (58-104)||(25449333-25449379)
chr1 (153-194)||(2137129-2137170)
chr1 (14-55)||(9346119-9346160)
chr1 (14-55)||(16236004-16236045)
chr1 (55-104)||(30571489-30571537)
chr1 (57-103)||(38281651-38281699)
chr1 (60-101)||(42283933-42283974)
chr1 (21-53)||(18614260-18614292)
chr1 (171-211)||(31513364-31513404)
chr1 (49-104)||(37640298-37640354)
[»] scaffold0217 (2 HSPs)
scaffold0217 (21-102)||(18327-18408)
scaffold0217 (55-104)||(22929-22978)
[»] scaffold0146 (1 HSPs)
scaffold0146 (14-104)||(14403-14501)
[»] scaffold0084 (1 HSPs)
scaffold0084 (14-67)||(31916-31969)
[»] scaffold0161 (2 HSPs)
scaffold0161 (14-104)||(10835-10929)
scaffold0161 (14-104)||(15499-15593)
[»] scaffold0315 (1 HSPs)
scaffold0315 (14-75)||(7983-8042)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-95)||(211658-211739)
[»] scaffold0607 (1 HSPs)
scaffold0607 (31-104)||(5421-5493)
[»] scaffold0056 (2 HSPs)
scaffold0056 (31-104)||(35490-35565)
scaffold0056 (31-104)||(26396-26471)
[»] scaffold0249 (1 HSPs)
scaffold0249 (31-104)||(18510-18581)
[»] scaffold0205 (1 HSPs)
scaffold0205 (47-101)||(717-771)
[»] scaffold0015 (1 HSPs)
scaffold0015 (171-261)||(38256-38346)
[»] scaffold0622 (1 HSPs)
scaffold0622 (21-104)||(1950-2037)
[»] scaffold0337 (1 HSPs)
scaffold0337 (19-96)||(14264-14344)
[»] scaffold0120 (1 HSPs)
scaffold0120 (14-104)||(37473-37558)
[»] scaffold0065 (1 HSPs)
scaffold0065 (19-96)||(1306-1386)
[»] scaffold0352 (1 HSPs)
scaffold0352 (31-104)||(1564-1639)
[»] scaffold0028 (1 HSPs)
scaffold0028 (24-100)||(24515-24594)
[»] scaffold0488 (1 HSPs)
scaffold0488 (31-103)||(11489-11563)
[»] scaffold0004 (4 HSPs)
scaffold0004 (21-104)||(378283-378373)
scaffold0004 (33-104)||(210693-210765)
scaffold0004 (19-104)||(219527-219618)
scaffold0004 (14-55)||(245008-245049)
[»] scaffold0471 (1 HSPs)
scaffold0471 (31-105)||(2741-2814)
[»] scaffold0359 (2 HSPs)
scaffold0359 (47-104)||(6488-6546)
scaffold0359 (14-55)||(6417-6458)
[»] scaffold0859 (1 HSPs)
scaffold0859 (47-104)||(2258-2315)
[»] scaffold0567 (1 HSPs)
scaffold0567 (14-55)||(9248-9289)
[»] scaffold0290 (1 HSPs)
scaffold0290 (47-104)||(19419-19476)
[»] scaffold0280 (1 HSPs)
scaffold0280 (47-104)||(3448-3505)
[»] scaffold0251 (1 HSPs)
scaffold0251 (14-102)||(7121-7207)
[»] scaffold0171 (1 HSPs)
scaffold0171 (14-55)||(28155-28196)
[»] scaffold0047 (1 HSPs)
scaffold0047 (14-55)||(7971-8012)
[»] scaffold0043 (1 HSPs)
scaffold0043 (36-104)||(79112-79181)
[»] scaffold1281 (1 HSPs)
scaffold1281 (15-55)||(2113-2153)
[»] scaffold0045 (1 HSPs)
scaffold0045 (31-104)||(88345-88420)
[»] scaffold0247 (1 HSPs)
scaffold0247 (31-101)||(16460-16533)
[»] scaffold0007 (2 HSPs)
scaffold0007 (24-103)||(63629-63711)
scaffold0007 (24-103)||(45958-46037)
[»] scaffold0479 (1 HSPs)
scaffold0479 (21-70)||(9290-9340)
[»] scaffold0201 (1 HSPs)
scaffold0201 (21-55)||(18543-18577)
[»] scaffold0115 (1 HSPs)
scaffold0115 (47-101)||(17623-17677)
[»] scaffold0330 (2 HSPs)
scaffold0330 (14-55)||(379-420)
scaffold0330 (47-88)||(446-488)
[»] scaffold0324 (1 HSPs)
scaffold0324 (14-55)||(9299-9340)
[»] scaffold0210 (1 HSPs)
scaffold0210 (14-55)||(1001-1042)
[»] scaffold0040 (1 HSPs)
scaffold0040 (14-55)||(2787-2828)
[»] scaffold0163 (2 HSPs)
scaffold0163 (57-104)||(25717-25765)
scaffold0163 (14-55)||(25802-25843)
[»] scaffold0530 (1 HSPs)
scaffold0530 (21-65)||(2750-2796)
[»] scaffold0069 (1 HSPs)
scaffold0069 (43-101)||(6027-6086)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-104)||(158435-158528)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-55)||(73924-73958)
[»] scaffold0023 (2 HSPs)
scaffold0023 (47-104)||(102844-102902)
scaffold0023 (21-55)||(102912-102946)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-55)||(2508-2549)
[»] scaffold0327 (1 HSPs)
scaffold0327 (14-55)||(7203-7244)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-55)||(7268-7309)
[»] scaffold0011 (2 HSPs)
scaffold0011 (31-104)||(145194-145270)
scaffold0011 (19-51)||(58911-58943)
[»] scaffold0009 (1 HSPs)
scaffold0009 (47-104)||(83650-83707)
[»] scaffold0308 (2 HSPs)
scaffold0308 (224-264)||(6235-6275)
scaffold0308 (224-264)||(14654-14694)
[»] scaffold0051 (1 HSPs)
scaffold0051 (178-262)||(53877-53960)


Alignment Details
Target: chr8 (Bit Score: 446; Significance: 0; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 14 - 502
Target Start/End: Original strand, 18321932 - 18322421
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactcagaaatata 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18321932 gaacatgtataattactttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactcagaaataga 18322031  T
Q  114 actcttctgcttctgatcagaagtagaactctaacaaacaagagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaa 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18322032 actcttctgcttctgatcagaagtagaactctaacaaacaagagtaatcaatgcttatttcttcaagtattttacatgcatataagttttaatataaaaa 18322131  T
Q  214 a-cctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatccgtatatctgtatcgcatcgtactcgtacgagtatcagcatcc 312  Q
    | ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18322132 atcctgctaacatatcttagccatattgtatcctaaattttaaaaaatttatatatccgtttatccgtatcgcatcgtactcgtacgagtatcagcatcc 18322231  T
Q  313 gggcttcttagttagaaggtaatatgatgtgatgtcacgttttatagccacttgcatcatggttgtcacgggaagctacaattatcattttccccataat 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18322232 gggcttcttagttagaaggtaatatgatgtgatgtcacgttttatagccacttgcatcatggttgtcacgggaagctacaattatcattttccccataat 18322331  T
Q  413 ttgtttgttatgtcctcagcttctgttagtgggtttggtgaagtgacccactgagttagtgcacttttccatttttgttcacaccattac 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18322332 ttgtttgttatgtcctcagcttctgttagtgggtttggtgaagtgacccactgagttagtgcacttttccatttttattcacaccattac 18322421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 18679189 - 18679100
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| ||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||| ||||||||||| ||||||| ||||||    
T  18679189 gaacctgtataattgctttgtgtctttcttctctctttctctattttatctgctgcatttagttctgaacatcacttcagaagcagaact 18679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 18718378 - 18718289
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| ||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||| ||||||||||| ||||||| ||||||    
T  18718378 gaacctgtataattgctttgtgtctttcttctctctttctctattttatctgctgcatttagttctgaacatcacttcagaagcagaact 18718289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 15336864 - 15336956
Alignment:
Q  14 gaacatgtataa-ttgctttgtgtctttcttctttctctctctg-ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||  |||| ||||||||||| ||||||| |||||||    
T  15336864 gaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactc 15336956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 15425929 - 15426021
Alignment:
Q  14 gaacatgtataa-ttgctttgtgtctttcttctttctctctctg-ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||  |||| ||||||||||| ||||||| |||||||    
T  15425929 gaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactc 15426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 15517233 - 15517325
Alignment:
Q  14 gaacatgtataa-ttgctttgtgtctttcttctttctctctctg-ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||  |||| ||||||||||| ||||||| |||||||    
T  15517233 gaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactc 15517325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 19942611 - 19942517
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||||||||||||    ||||||| ||||| | ||||||||||||||||| |||||||||||||||    
T  19942611 gaacctgtataattgctttgtgtctttcttctttctctctctacgtttttatcggctgcaagttagtcctgaacatcacttcagaagtagaactc 19942517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 25163446 - 25163353
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||| |||||||||||||||||    |||||||||||||| ||||||| ||||||||| ||||||| |||||||    
T  25163446 gaacctgtataattgctttgtgtcgttcttctttctctctctctgtttttatccgctgcaattagtccggaacatcacttcagaagcagaactc 25163353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 9319946 - 9319854
Alignment:
Q  12 atgaacatgtataa-ttgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||||||||  |||| ||||||||||| |||||||||||||||    
T  9319946 atgaacctgtataaattgttttgtgtctttcttctctctctctctgttt-atccgctgcaagtagttctgaacatcacttcagaagtagaactc 9319854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 13431411 - 13431487
Alignment:
Q  30 tttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  13431411 tttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 13431487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 23185531 - 23185615
Alignment:
Q  24 aattgctttgtgtctttctt----ctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||    |||||||||||||||||||||||| ||| |||| ||||||||| | |||||||||||||||    
T  23185531 aattgctttgtgtctttcttttctctttctctctctgttttatccgctacatctagttctgaacatcgcttcagaagtagaactc 23185615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 11755511 - 11755405
Alignment:
Q  152 caagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaat 250  Q
    |||||||||||| || |||||| |||||||||||||||||||   |||||||||||||||||||  |  |||| |||||||||  |||| ||||||||||    
T  11755511 caagagtaatcaatgtttattttcttcaagtattttacatgcgcataagttttaatataaaaaatttgttaacgtatcttagcagtatcatatcctaaat 11755412  T
Q  251 tttaaaa 257  Q
    |||||||    
T  11755411 tttaaaa 11755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 20256288 - 20256381
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt--tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||  || | ||||| ||||||| |||||||    
T  20256288 gaacttgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttttggaaatcacttcagaagcagaactc 20256381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 14990272 - 14990342
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  14990272 ttgtgtctttcttct--ctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 14990342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 17526512 - 17526558
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgtttt 60  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17526512 gaacctgtataattgctttgtgtctttcttctttctctctctgtttt 17526558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 20383162 - 20383211
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  20383162 tctctctctattttatccgctgcatttagtcctgaacatcacttcagaag 20383211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 30422242 - 30422299
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||    
T  30422242 tctctctctgttttatccgctgcatctagttcagaacatcacttcagaagtagaactc 30422299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 43639093 - 43639036
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||| |||||| || | |||||||||||||||    
T  43639093 tctctctctgttttatccgctgcatttagttctgaacttctcttcagaagtagaactc 43639036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 18772067 - 18771975
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct-tctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||||| | ||||||||||  |||||||| ||||||    
T  18772067 gaacctgtataattgctttgtctctctctctctctctctctctgttttatccgctacatttagattctgaacatcaattcagaagttgaactc 18771975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 37232106 - 37232213
Alignment:
Q  153 aagagtaatcagtgcttatttcttc--aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaat 250  Q
    ||||||||||| ||||||||| ||   ||||||||||||||||| ||| |||||||||||| |   |  |||| |||||||||||||||||||| | |||    
T  37232106 aagagtaatcaatgcttattttttgttaagtattttacatgcatataaattttaatataaatattttgttaacgtatcttagccatatcgtatcttgaat 37232205  T
Q  251 tttaaaaa 258  Q
    ||||||||    
T  37232206 tttaaaaa 37232213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 15934437 - 15934527
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagt-cctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |  ||||||||||| | |||||| ||||||    
T  15934437 gaacctgtataattgctttgtgtctttcttctctctctctgt-ttttatccgttgcatttactatctgaacatcactttagaagttgaactc 15934527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 16206560 - 16206513
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  16206560 ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 16206513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 14990885 - 14990957
Alignment:
Q  33 gtgtctttcttctttctc--tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  14990885 gtgtctttcttctctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 14990957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 18121943 - 18122001
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||    
T  18121943 tctctctctgtttttatccgctgcatctagtcctgatcatcacttcagaagtagaactc 18122001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 36104698 - 36104625
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactca 105  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||| ||| ||||| | ||||||||||||||||    
T  36104698 ttgtgtctttcttctctctctctgt-ttttatccgctgcaattagttctggacatctcttcagaagtagaactca 36104625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 14180429 - 14180546
Alignment:
Q  154 agagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatttt 253  Q
    |||||||||| ||||||||| ||||||||||||||| |||| ||| ||||| |||||| |   |  |||| |||||||||   || ||||  ||||||||    
T  14180429 agagtaatcaatgcttattttttcaagtattttacacgcatataaattttagtataaatattttgttaacgtatcttagcagcattgtattttaaatttt 14180528  T
Q  254 aaaaaatttatatatccg 271  Q
    |||||||||| |||||||    
T  14180529 aaaaaatttacatatccg 14180546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 17796756 - 17796699
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||  |||| ||||||||||| ||||||||| |||||    
T  17796756 tctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtataactc 17796699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 22673114 - 22673058
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  22673114 tctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 22673058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 17442669 - 17442716
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  17442669 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 17442716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 45292203 - 45292129
Alignment:
Q  31 ttgtgtctttcttctttctctctc--tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||| |||| ||||||||| | ||||||||||||||    
T  45292203 ttgtgtctctcttctctctttctccctgttttatccgctgcatctagttctgaacatctcttcagaagtagaact 45292129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16682029 - 16682114
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt--tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||| |||||||||| |||||||||||| ||||  ||||||||||||||||| ||||| ||||||| ||| | ||||| |||||||    
T  16682029 gaacttgtataattgttttgtgtctttcctctttctctctctctgttttatctgctgctatttagttctggaaatcacttcagaag 16682114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 19957113 - 19957177
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgcatttag 75  Q
    |||| ||||||||||||||||||||||||||| || ||||||    |||||||||||||||||||    
T  19957113 gaacctgtataattgctttgtgtctttcttctctccctctctctatttttatccgctgcatttag 19957177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 31431122 - 31431016
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    |||| |||||| ||||||||| ||||||||||||||||||||| ||||||||| |||| |||   || |||| ||| |||| | |||| | |||||||||    
T  31431122 aagattaatcaatgcttattttcttcaagtattttacatgcatataagttttagtatacaaattttattaacgtattttagtcgtatcatctcctaaatt 31431023  T
Q  252 ttaaaaa 258  Q
    || ||||    
T  31431022 ttcaaaa 31431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 1744533 - 1744480
Alignment:
Q  49 tctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||| |||||||||||||||| ||||||||| | ||||||||||||    
T  1744533 tctctctgtttttatccgctgcatttagttctgaacatctcttcagaagtagaa 1744480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 12758512 - 12758553
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  12758512 gaacctgtataattgctttgtgtctttcttctctctctctct 12758553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 16206646 - 16206605
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  16206646 gaacctgtataattgctttgtgtctttcttctctctctctct 16206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 16591201 - 16591160
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaa 212  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  16591201 tttcttcaagtattttacatgcatataagttttattataaaa 16591160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 18121884 - 18121925
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  18121884 gaacttgtataattgctttgtgtctttcttctctctctctct 18121925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 18152516 - 18152572
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| || ||||| ||||||||| | |||||||||||||||    
T  18152516 tctctctctgttttatccgctacaattagt-ctgaacatctcttcagaagtagaactc 18152572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 20383113 - 20383154
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  20383113 gaacctgtataattgctttgtgtctttcttctctctctctct 20383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 22662409 - 22662353
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| || || ||||||||| | |||||||||||||||    
T  22662409 tctctctctgttttatccgctgcaatttgt-ctgaacatctcttcagaagtagaactc 22662353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 26832451 - 26832410
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  26832451 gaacctgtataattgctttgtgtctttcttctatctctctct 26832410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 40846215 - 40846272
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| || ||||| ||||||||| ||||| ||||| |||||    
T  40846215 tctctctctgttttatccgctacaattagttctgaacatctcctcataagtataactc 40846272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 2813536 - 2813456
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    ||||||||||||  ||| ||| |||||||||||| |   |  ||||| ||||||||| |||||||||||||||||||||||    
T  2813536 aagtattttacacacatataaattttaatataaatattttgttaacacatcttagccgtatcgtatcctaaattttaaaaa 2813456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 6407116 - 6407042
Alignment:
Q  31 ttgtgtctttcttctttctct--ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||| |||||| || | | |||||||||||||    
T  6407116 ttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacttctctttagaagtagaactc 6407042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 19153404 - 19153368
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19153404 tgtataattgctttgtgtctttcttatttctctctct 19153368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 23264453 - 23264493
Alignment:
Q  61 atccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  23264453 atccgctgcatctagtcctgaacatcacttcagaagtagaa 23264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 32856232 - 32856327
Alignment:
Q  175 ttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatccg 271  Q
    |||||||||||||||| ||| |||||||| | ||||||||  |  |||| |||||||| | ||||||||| |||||||| ||| |||| ||||||||    
T  32856232 ttcaagtattttacatacatataagtttt-agataaaaaaattgttaacgtatcttagtcgtatcgtatcataaattttgaaatatttgtatatccg 32856327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 21932215 - 21932165
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagt 97  Q
    |||||||||||||||||| |||||| |||| |||||||| || ||||||||    
T  21932215 tctctctctgttttatccactgcatctagttctgaacattacttcagaagt 21932165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 26079607 - 26079649
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaa 213  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||    
T  26079607 tttcttcaagtattttacattcatataagttttagtataaaaa 26079649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 45539307 - 45539353
Alignment:
Q  58 tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| | || ||||||||||| |||||||||||||||    
T  45539307 tttatccgctgcatcttgttctgaacatcacttcagaagtagaactc 45539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 17928464 - 17928436
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct 42  Q
    |||||||||||||||||||||||||||||    
T  17928464 gaacatgtataattgctttgtgtctttct 17928436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 25850764 - 25850792
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct 42  Q
    |||||||||||||||||||||||||||||    
T  25850764 gaacatgtataattgctttgtgtctttct 25850792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 23749896 - 23749811
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23749896 tgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactc 23749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 55379687 - 55379598
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  55379687 gaacctgtataattgttttgtgtctttcttctttctctctctgttttatccactgcatttagtcttgaacatcacttcagaagtagaact 55379598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 19665742 - 19665651
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||    
T  19665742 gaacctgtataattgctttgtgtctttcttctttgtctctctgttttatccgctgctatttagttctggaaatcacttcagaagaagaactc 19665651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 23120914 - 23120823
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| | ||||| ||| | ||||| ||||||| |||||||    
T  23120914 gaacatgtataattgttttgtgtctttcttctttctctctctgttttatacactgctacttagttctggaaatcacttcagaagcagaactc 23120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 14605639 - 14605720
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaa 95  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||| ||||||||||||| ||||||    
T  14605639 gaacttgtataattgctttgtgtctttcttctttctctctgt-ttttatccgctgcaagttattcctgaacatcacttcagaa 14605720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 13576915 - 13576972
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  13576915 tctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 13576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 22676327 - 22676384
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  22676327 tctctctctgttttatccgctgcatctagtcctgaacatcacttcaaaagtagaactc 22676384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 29120732 - 29120653
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||||| ||||||| || || |||||||||| ||||| ||||||||||| |||||||||||||||    
T  29120732 aattgctttgtgtctctcttctctctctctatgctt-atccgctgcaattagttctgaacatcacttcagaagtagaactc 29120653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 3106169 - 3106240
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||  |||||||| | |||||||||||||||    
T  3106169 ttgtgtctttcttct--ctctctctgttttatccgctgcaattagttatgaacatctcttcagaagtagaactc 3106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 6008414 - 6008535
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatcc 270  Q
    |||||||||||||||||||| ||| ||||||||||||||||     |  | |  |||||||||| |||||||||||||||||| ||| ||| |  |||||    
T  6008414 tttcttcaagtattttacatacatataagttttaatataaattttttgtttaagtatcttagccgtatcgtatcctaaattttgaaatattcacgtatcc 6008513  T
Q  271 gtatatctgtatcgcatcgtac 292  Q
    | |||||||||||| |||||||    
T  6008514 gcatatctgtatcgtatcgtac 6008535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 8686177 - 8686267
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactca 105  Q
    |||| |||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||   ||||||||||| ||| ||| ||||||||    
T  8686177 gaacttgtataattgttttgtgtctttcttct--ctcgctctgttttatccgctgcatttagaatctgaacatcacttcaaaagcagaactca 8686267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 17246952 - 17246895
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||| |||| |||| ||||||||||| |||||||||||||||    
T  17246952 tctctctctgttttatccgccgcatctagttctgaacatcacttcagaagtagaactc 17246895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 40217889 - 40217998
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    ||||||||||| || |||||| |||||||||||||| || ||| ||||||||| |||||| |   |  |||| |||||||||| ||||||||||||||||    
T  40217889 aagagtaatcaatgtttattttcttcaagtattttatatacatataagttttagtataaatattttgttaacgtatcttagccgtatcgtatcctaaatt 40217988  T
Q  252 ttaaaaaatt 261  Q
    | ||||||||    
T  40217989 tcaaaaaatt 40217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 3500402 - 3500477
Alignment:
Q  32 tgtgtctttcttctttct--ctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  3500402 tgtgtctttcttctctctttctctctgttcttatccgctgcatttagttctgaacatcccttcagaagtagaactc 3500477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 22190206 - 22190131
Alignment:
Q  31 ttgtgtctttcttctttctctctct--gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| ||| |||||  |||||||||||||||||||||  |||||||| | |||||||||||||||    
T  22190206 ttgtgtctttcttctctctttctctttgttttatccgctgcatttagttatgaacatctcttcagaagtagaactc 22190131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 8103651 - 8103580
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagta 98  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| |||||  |||||||||| |||||||||    
T  8103651 aattgctttgtgtctttcttc--tctctctctg-tttatccgctgcaattagttatgaacatcacttcagaagta 8103580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 29681250 - 29681305
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc 69  Q
    |||| |||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  29681250 gaacctgtataattgttttgtgttgttcttctttctctctctgttttatccgctgc 29681305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 37986346 - 37986401
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc 69  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  37986346 gaacctgtataattgttttgtgtctttcttatttctctctctgttttatccactgc 37986401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 19621730 - 19621813
Alignment:
Q  28 gctttgtgtctttcttctttctct--------ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||| | ||||| ||||||    
T  19621730 gctttgtgtctttcttctttctctgtctctttctctgttttatccgctgcatttagttctgaacatcactttagaagcagaact 19621813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 16847741 - 16847668
Alignment:
Q  36 tctttcttctttctctctctg-ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactcagaa 108  Q
    |||| ||||| |||||||||| |||||||||||||||||||| |||||||| || ||||||||| |||| ||||    
T  16847741 tcttccttctctctctctctgcttttatccgctgcatttagttctgaacattacttcagaagtacaacttagaa 16847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 16852815 - 16852758
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||| |||||||||||||||| |||||||| || ||||||||||||||    
T  16852815 tctctctctgtttttatccgctgcatttagttctgaacattacttcagaagtagaact 16852758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 17399447 - 17399504
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||| ||||||||||||||||||| |||| ||||||||| | |||||||||||||||    
T  17399447 tctctatctgttttatccgctgcatctagttctgaacatctcttcagaagtagaactc 17399504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 54679203 - 54679146
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| | ||  |||||||||| |||||||||||||||    
T  54679203 tctctctctgttttatccgctgcatcttgttttgaacatcacttcagaagtagaactc 54679146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 4776084 - 4776184
Alignment:
Q  158 taatcagtgcttatttct-tcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaa 256  Q
    |||||| ||||||||| | ||||||||||||||| ||| ||||||||||||||||||   || |||| ||| |||||   ||||||| ||||||||||||    
T  4776084 taatcaatgcttatttttatcaagtattttacatacatataagttttaatataaaaatattattaacgtattttagctgcatcgtattctaaattttaaa 4776183  T
Q  257 a 257  Q
    |    
T  4776184 a 4776184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 24628674 - 24628721
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  24628674 ttttatccaatgcatttagtcctgaacatcacttcagaagtagaactc 24628721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 49195937 - 49196008
Alignment:
Q  224 atatcttagccatatcgtatcctaaattttaaaaaatttatatatccgtatatctgtatcgcatcgtactcg 295  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||| | | ||| ||| ||| ||||||||||    
T  49195937 atatcttagccgtatcgtatcctaaatttttaaaaacttatatattcatgtatatgtttcgtatcgtactcg 49196008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 6641062 - 6640983
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagt-cctgaacatcacctcagaag 96  Q
    |||| |||||||||| ||||||||||||    |||||||||||||||||||  ||||||||||  ||||||||||| |||||||    
T  6641062 gaacttgtataattgttttgtgtctttc----ttctctctctgttttatccattgcatttagtatctgaacatcacttcagaag 6640983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 15135062 - 15135004
Alignment:
Q  47 tctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| |||| ||||||||||||| | |||||| ||||||    
T  15135062 tctctctctgttttatccgctgcaattagatcctgaacatcactttagaagtggaactc 15135004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 16631817 - 16631760
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc 69  Q
    |||| |||||||||||||| |||||||||| |||||||  ||||||||||||||||||    
T  16631817 gaacctgtataattgctttctgtctttcttatttctctctctctgttttatccgctgc 16631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 27189410 - 27189467
Alignment:
Q  43 tctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| | ||||||||||||    
T  27189410 tctttctctctat-ttttatccgctgcatttagttctgaacatctcttcagaagtagaa 27189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 37436277 - 37436354
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||| ||||| |   |||||| |||||| | |||| ||||||||||| ||| |||||||||||    
T  37436277 aattgctttgtgtctttcttctctctctgt---ttttattcgctgcttctagttctgaacatcacttcataagtagaactc 37436354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 56033873 - 56033813
Alignment:
Q  47 tctctctctgtttt---atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||   || |||||||| |||||||||||||||| |||||||||||||||    
T  56033873 tctctctctgtttttagattcgctgcatctagtcctgaacatcacttcagaagtagaactc 56033813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 10071846 - 10071789
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||  |||||| |||| ||||||||||| |||||||| ||||||    
T  10071846 tctctctctgttttatctactgcatctagttctgaacatcacttcagaagtggaactc 10071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 15475887 - 15475955
Alignment:
Q  20 gtataattgctttgtgtctttcttctttc--tctctctgttttatccgctgcatttagtcctgaacatc 86  Q
    ||||||||||||||||||| |||||| ||  ||||||||||||||| ||||||| |||| ||| |||||    
T  15475887 gtataattgctttgtgtctctcttctctctttctctctgttttatctgctgcatctagttctggacatc 15475955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 19721484 - 19721396
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaat 260  Q
    |||||||||||||||||||| ||| ||||||||| ||||||     |  |||| |||| || ||||||||||||||||||||||||||||    
T  19721484 tttcttcaagtattttacatacatataagttttattataaatttt-tgttaacgtatcctaaccatatcgtatcctaaattttaaaaaat 19721396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 19884110 - 19884069
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  19884110 gaacctgtataattgctttgtgtctttcttctctctctctct 19884069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 15560644 - 15560563
Alignment:
Q  21 tataattgctttgtgtctttcttctttctc----tctctg-ttttatccgctgcatttag-tcctgaacatcacctcagaag 96  Q
    |||||||| |||||||||||||||| ||||    |||||| ||||||||||||||||||| | ||||||||||| |||||||    
T  15560644 tataattgttttgtgtctttcttctctctcgctttctctgtttttatccgctgcatttagattctgaacatcacttcagaag 15560563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 28101802 - 28101750
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagtttta 204  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  28101802 aagagtaatcaatgcttattttcttcaagtattttgcatgcatataagtttta 28101750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22089663 - 22089575
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct----tctttctctctctg-ttttatccgctgcatttag-tcctgaacatcacctcagaag 96  Q
    |||| ||||||||||||||||||||||||    ||| |||| ||||| |||||||||||||||||||   ||||||||||| |||||||    
T  22089663 gaacctgtataattgctttgtgtctttcttctatctatctccctctgtttttatccgctgcatttagcatctgaacatcacttcagaag 22089575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 44397541 - 44397494
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |||||||    
T  44397541 ttttatccgctacatctagtcctgaacatcacttcagaagcagaactc 44397494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 45832764 - 45832677
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct-----gttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    |||| ||||||||||||||||||||||||||| | |||||||      |||||||||||||||  | ||||||||||||  |||||||    
T  45832764 gaacctgtataattgctttgtgtctttcttctctgtctctctatctgtttttatccgctgcatcgaatcctgaacatcagttcagaag 45832677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 4110144 - 4110102
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaa 213  Q
    ||||||||||||||||||||| || ||||||||| ||||||||    
T  4110144 tttcttcaagtattttacatgtatataagttttagtataaaaa 4110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 10072224 - 10072182
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagt 97  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||    
T  10072224 tgttttatccgctgcatctagttctgaacatcacttcagaagt 10072182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 45662012 - 45662054
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaa 213  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||    
T  45662012 tttcttcaaatattttacatgcatataagttttagtataaaaa 45662054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 55731172 - 55731118
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||||| |||||  ||||  |||||||||| ||||||||||||    
T  55731172 tctctctctgttttatccactgcaactagttttgaacatcacttcagaagtagaa 55731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 3395027 - 3394986
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| ||||||||||||||| ||||||||||    
T  3395027 gaacctgtataattgttttgtgtctttcttccttctctctct 3394986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 11900568 - 11900527
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||| ||||||||||||||||| |||||||||    
T  11900568 gaacctgtataattactttgtgtctttcttctctctctctct 11900527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 12600098 - 12600041
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||||| ||||||| ||  | ||||| ||||||||||||||    
T  12600098 tctctctctgttttatccgctgctatttagttctagaaatcacttcagaagtagaact 12600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 14357736 - 14357695
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  14357736 gaacctgtataattgttttgtgtctttcttctctctctctct 14357695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 14905092 - 14905149
Alignment:
Q  49 tctctctgtttt-atccgctgcat-ttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||    
T  14905092 tctctctgtttttatccgctgcaaattagtcatgaacatcacttcagaagtagaactc 14905149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 16939319 - 16939263
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||| ||||||||| | |||| |||| |||||    
T  16939319 tctctctctgttttatccgctgcaattagt-ctgaacatctcttcaggagtataactc 16939263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 17247007 - 17246966
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||| ||| |||||||||    
T  17247007 gaacttgtataattgctttgtgtctttcctctctctctctct 17246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 22676256 - 22676297
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  22676256 gaacctgtataattgctttgtgtctttcttttctctctctct 22676297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 44987599 - 44987656
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatata 209  Q
    ||||||||||  ||||||||| |||||||||||||||||| || ||||||||| ||||    
T  44987599 aagagtaatcgttgcttattttcttcaagtattttacatgaatataagttttagtata 44987656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 47724650 - 47724570
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaa 259  Q
    ||||||||||||||||| ||| ||||| |||||| ||  |  |||| ||| |||||| ||||||||||| ||||||||||||    
T  47724650 aagtattttacatgcatataaattttagtataaataatttgttaacgtatattagccgtatcgtatcct-aattttaaaaaa 47724570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 2242659 - 2242619
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaa 211  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  2242659 tttcttcaagtattttacatacatataagttttattataaa 2242619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 13890212 - 13890184
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct 42  Q
    |||||||||||||||||||||||||||||    
T  13890212 gaacatgtataattgctttgtgtctttct 13890184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 40860031 - 40859984
Alignment:
Q  31 ttgtgtctttcttctttctctct--ctgttttatccgctgcatttagt 76  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  40860031 ttgtgtctttcttctctctttctttctgttttatccgctgcatttagt 40859984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 41115491 - 41115523
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt 46  Q
    |||| ||||||||||||||||||||||||||||    
T  41115491 gaacctgtataattgctttgtgtctttcttctt 41115523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 56033945 - 56033909
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||| |||||||||||||||| |||||||||    
T  56033945 tgtataattgttttgtgtctttcttctctctctctct 56033909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 6498692 - 6498601
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  6498692 gaacctgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcaacttagtcctgaacatcacttcagaagtagaactc 6498601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 21075946 - 21076034
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctc--tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactca 105  Q
    |||||||||| |||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21075946 tgtataattgttttgtgtctttcttctctctctctctctgttttatccgctgcatttagttctgaacatcacttcagaagtagaactca 21076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 23880356 - 23880299
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23880356 tctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactc 23880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 7746452 - 7746546
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||||||||||||    ||||||||||| | | ||||||||||||||||| |||||||||||||||    
T  7746452 gaacctgtataattgctttgtgtctttcttctttctctctctctgtttttatccgctacaagttagtcctgaacatcacttcagaagtagaactc 7746546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 6513189 - 6513280
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| ||| | ||||| ||||||| |||||||    
T  6513189 gaacctgtataattgttttgtgtctttcttctttctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcagaactc 6513280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 9399374 - 9399460
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||    
T  9399374 gaacttgtataattgttttgtgtctctcttctttctctctttgttttatccgctgcaattagtcctg-acatcacttcagaaatagaa 9399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 22000790 - 22000869
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctc--tgttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||| |||||| ||||||||||||||||  |||||||    
T  22000790 tgtataattgctttgtgtctttcttccttctctctctttgttttatctgctgcaattagtcctgaacatcatttcagaag 22000869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 35932781 - 35932856
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  35932781 ttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 35932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 19546323 - 19546372
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19546323 tctctctctgttttatccgctgcatttagtcctgaacatcacttcagaag 19546372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 8229500 - 8229588
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaa 259  Q
    |||||||||||||||||||| ||| ||||||||||||||||     || |||| |||||||| | ||||||||||||||||||||||||    
T  8229500 tttcttcaagtattttacatacatataagttttaatataaattttttattaacgtatcttagtcgtatcgtatcctaaattttaaaaaa 8229588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 643458 - 643546
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgca-tttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| |||||||||| |||||||||||||||  |||||||| |||||||||| |||| ||||||||| |||||||| ||| ||||||||||    
T  643458 gaacttgtataattgttttgtgtctttcttc--tctctctccgttttatccgttgcattttagtcctaaacatcacttcaaaagtagaact 643546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 17814343 - 17814253
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||  || | ||||| ||||||| ||||    
T  17814343 gaacctgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcagaa 17814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 23413732 - 23413826
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctct--ctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||||| || ||||| |||||||||| ||| ||| |||||||    
T  23413732 gaacctgtataattgctttgtgtctttcttctttctctctccctgtttttatccgctgcaatctagtcatgaacatcacttcaaaagcagaactc 23413826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 10848119 - 10848058
Alignment:
Q  43 tctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||    
T  10848119 tctttctctctctgttttatccgctgcatttagttatgaacatcttttcagaagtagaactc 10848058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 31487552 - 31487495
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||    
T  31487552 tctctctctgttttatccgctgcatctagtcctgaacatcacttcaaaattagaactc 31487495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 2627870 - 2627779
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaattt 262  Q
    |||||| ||||||||||||| ||| ||||||||| |||||||    |  |||| ||||||| || |||||||||||||||||||||||||||    
T  2627870 tttcttgaagtattttacatacatataagttttagtataaaatttttgttaacgtatcttaaccgtatcgtatcctaaattttaaaaaattt 2627779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 31146398 - 31146453
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||| ||||||||| | | |||||||||||||    
T  31146398 tctctctgttttatccgctgcatttagttctgaacatctctttagaagtagaactc 31146453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 37395534 - 37395457
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||| ||||| |||||||| | ||| ||||||||||||||||||  |||| ||||||||||| |||||| |||||    
T  37395534 aattgctatgtgtttttcttctctttctttctgttttatccgctgcaactagttctgaacatcacttcagaaatagaa 37395457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26766593 - 26766637
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgtt 58  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  26766593 gaacctgtataattgctttgtgtctttcttctttctctctttgtt 26766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 30742283 - 30742227
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||| ||||||  |||| ||||||||||| ||||||||||||||    
T  30742283 tctctctctgttttatctgctgcaactagttctgaacatcacttcagaagtagaact 30742227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 12353661 - 12353712
Alignment:
Q  52 ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||||||||||    
T  12353661 ctctgttttatccgctgcaattagtcatgaacatcacttcataagtagaact 12353712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 35987019 - 35987074
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||| |||| |||||||||   |||||||||||||||    
T  35987019 tctctctgttttatccgctgcatctagttctgaacatctattcagaagtagaactc 35987074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 39799598 - 39799637
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctct 53  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  39799598 gaacatgtataattgctttgtgtctttcttctctctctct 39799637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 33932611 - 33932557
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||||  |||| ||||||||||  ||||||||||||    
T  33932611 tctctctctgttttatccgctgcaactagttctgaacatcatttcagaagtagaa 33932557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 90234 - 90283
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||| |||||||||| || |||| |||||||    
T  90234 tgttttatccgctgcatttagtcatgaacatcacttcggaagcagaactc 90283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 7057334 - 7057435
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaa-gtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaat 250  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||| ||| ||||| |||||||    | ||||| ||||||| || |||||||||||||||    
T  7057334 aagagtaatcaatgcttattttcttcaaagtattttacatacatataaattttagtataaaatttttgctaacgtatcttaaccgtatcgtatcctaaat 7057433  T
Q  251 tt 252  Q
    ||    
T  7057434 tt 7057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 11993258 - 11993175
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgt---tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| ||| |||||| |   |||||||| || | ||||| ||||||||||| ||||||| |||||||    
T  11993258 aattgctttgtgtctttcttccttccctctctttgtttttatccgttgaaattagttctgaacatcacttcagaagcagaactc 11993175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 28138937 - 28138885
Alignment:
Q  51 tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  28138937 tctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 28138885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 29139216 - 29139272
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||| ||||||||| | | |||||||||||||    
T  29139216 tctctctctgttttatccgctgcaattagt-ctgaacatctctttagaagtagaactc 29139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 16606894 - 16606854
Alignment:
Q  15 aacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  16606894 aacatgtataattgctttgtgtctttcttttctctctctct 16606854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 31117258 - 31117162
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgt-----tttatccgctgcat-ttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |     ||||||| |||||  ||||| || |||||||| |||||||||||||||    
T  31117258 gaacctgtataactactttgtgtctttcttctttctctctctctctgtttttatccactgcaagttagttctaaacatcacttcagaagtagaactc 31117162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 3246266 - 3246313
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  3246266 ttttatccgctgcaattagttctgaacatctcttcagaagtagaactc 3246313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 13546279 - 13546377
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttcttt------ctctctctg-ttttatccgctg-catttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||||||||||||||||||      ||||||||| ||||||||||||  | |||||  |||||||||| |||||||||||||||    
T  13546279 gaacctgtataattgttttgtgtctttcttctttctctccctctctctgtttttatccgctgtaagttagttatgaacatcacttcagaagtagaactc 13546377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 26783682 - 26783627
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||    
T  26783682 tctctctctattttatccgctgctatttagttctaaacatcacttcagaagtagaa 26783627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 33022032 - 33021946
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgt------tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||| ||||||||| |      |||||||  ||||| |||| ||||||||||| || ||||||||||||    
T  33022032 aattgctttgtgtctttcttctctctctctctctctctattttatccattgcatctagttctgaacatcacttcggaagtagaactc 33021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 19099825 - 19099736
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatt 261  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||    |  |||| |||| || || ||||||||||||||||||||||||||    
T  19099825 tttcttcaagtattttacatacatataagttttactat-aaatttttgttaacgtatcataaccgtatcgtatcctaaattttaaaaaatt 19099736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 13736907 - 13736956
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||| ||||  |||||||||| |||||||| ||||||    
T  13736907 tgttttatccgctgcatctagttatgaacatcacttcagaagtggaactc 13736956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 21100461 - 21100502
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  21100461 gaacctgtataattgttttgtgtctttcttctctctctctct 21100502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 21207534 - 21207575
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||| ||||||||||||||||||||| |||||||||    
T  21207534 gaacctgtatgattgctttgtgtctttcttctctctctctct 21207575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 21659586 - 21659518
Alignment:
Q  20 gtataattgctttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatc 86  Q
    ||||||||| ||||||||| |||||| |||  |||||| ||||||||||||||| |||| ||| |||||    
T  21659586 gtataattgatttgtgtctctcttctctctttctctctattttatccgctgcatctagttctggacatc 21659518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 23407421 - 23407477
Alignment:
Q  32 tgtgtctttcttctttc--tctctctgttttatccgctgcatttagtcctgaacatc 86  Q
    |||||||||||||| ||  |||||||||||||||| |||||| |||| |||||||||    
T  23407421 tgtgtctttcttctctccttctctctgttttatccactgcatctagttctgaacatc 23407477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 25097584 - 25097625
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||| ||| |||||||||    
T  25097584 gaacctgtataattgctttgtgtctttcctctctctctctct 25097625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 28465141 - 28465197
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||| | |||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  28465141 tctctctctctcttatccgctgcaattagt-ctgaatatcacttcagaagtagaactc 28465197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 31487617 - 31487576
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||| |||||||||||    
T  31487617 gaacctgtataattgttttgtgtctttcttttttctctctct 31487576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 4886326 - 4886289
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgca 70  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  4886326 ttgtgtctttcttct--ctctctctgttttatccgctgca 4886289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 25155554 - 25155594
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctc 54  Q
    |||| ||||||||||||||||||||||| ||| ||||||||    
T  25155554 gaacctgtataattgctttgtgtctttcctctctctctctc 25155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 29230855 - 29230815
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaa 211  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  29230855 tttcttcaagtattttacatacatataagttttattataaa 29230815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 36906979 - 36907064
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    |||||||||| ||||||||||||| ||| ||||| |||||||||  |  |||| |||||||||| |||  | ||||||||||| ||||    
T  36906979 tttcttcaagaattttacatgcatataaattttagtataaaaaatttgttaacgtatcttagccgtat--tgtcctaaatttttaaaa 36907064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 19328795 - 19328881
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  19328795 tgtataattgctttgtgtctttcttctttctctctctctttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 19328881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 21284153 - 21284245
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||| ||||||||    
T  21284153 gaacatgtataattgctttgtgtctttcttctttctctctctgtttttatccgctgcaatttaatcctgaacatcacttcagaaatagaactc 21284245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 4832104 - 4832195
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctg-ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  4832104 gaacctgtataattgctttgtgtctttcttccttctctctctgtttttatccgctgcaattagttctgaacatcacttcagaagtagaactc 4832195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 41843203 - 41843293
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||| ||||||||||| |||||||||||||||    
T  41843203 gaacttgtataattgctttgtgtttttcttctttctctctctgttttatttgctgcaattagttctgaacatcacttcagaagtagaactc 41843293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 13473258 - 13473357
Alignment:
Q  12 atgaacatgtataattgctttgtgtctttcttct--------ttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13473258 atgaacatgtataattgatttgtgtctttcttctctctctctttctctctctgttttatccgctgcatttagtcttgaacatcacttcagaagtagaact 13473357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 13681673 - 13681582
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||    
T  13681673 gaacctgtataattgctttgtgtctttcttctttctctctttgttttatccgctgctatttagttctggaaatcacttcagaagcagaactc 13681582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 30025313 - 30025222
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| | ||||||||||||||||| ||| ||||||||||    
T  30025313 gaacatgtataattgttttgtgtctttcttctttctctctatgtttttatccgctgcaagttagtcctgaacatcacatcataagtagaact 30025222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 15087929 - 15087840
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||| ||||||||| ||||||| ||||||| | ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  15087929 gaacctgtataatttctttgtgtccttcttctctctctctgt-ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 15087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 29936124 - 29936216
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttct--ttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||||||||||||||||  |||||||||||||| |||||||||||| |||| |||||||||| ||||||| |||||||    
T  29936124 gaacctgtataattgttttgtgtctttcttctctttctctctctgtttcatccgctgcattcagtcatgaacatcacttcagaagcagaactc 29936216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 4820865 - 4820772
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||| ||||||||||    |||||||||||||| ||||| ||||||||||| ||| |||||||||||    
T  4820865 gaacctgtataattgctttgtgtctttcttccttctctctctctaattttatccgctgcaattagttctgaacatcacttcaaaagtagaactc 4820772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 10883950 - 10884033
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || || ||||| |||||||    
T  10883950 gaacctgtataattgctttgtgtctttcttctttctctctctattttatccgctgctatttagttctcaaaatcacttcagaag 10884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 13645829 - 13645738
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| | ||||  ||||||| |||||||    
T  13645829 gaacctgtataattgctttgtgtctttcctctttctctctctgttttatccgctgctatttagttctggaaatcagttcagaagcagaactc 13645738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 12367571 - 12367628
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  12367571 tctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagaagaactc 12367628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 16315317 - 16315408
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| || ||| | ||||| ||||||| |||||||    
T  16315317 gaacctgtataattgctttgtgtctttcttcattctctctttgttttatccgctgctattttgttctggaaatcacttcagaagcagaactc 16315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 9710648 - 9710705
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  9710648 tctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 9710705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 14187067 - 14186976
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    |||| ||||||||| |||||||||||||||||||||||||||    ||||||||||||| | ||| ||||||||||||| ||||||||||||    
T  14187067 gaacctgtataatttctttgtgtctttcttctttctctctctttgtttttatccgctgcaagttactcctgaacatcacttcagaagtagaa 14186976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 33604285 - 33604194
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    |||| |||||||||||||||||||||||||||||||||||||    ||||||||||||| | ||||| ||||||||||| ||||||| ||||    
T  33604285 gaacctgtataattgctttgtgtctttcttctttctctctctccgtttttatccgctgcaagttagttctgaacatcacgtcagaagcagaa 33604194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 5001676 - 5001732
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  5001676 tctctctctgttttatccgctgcatttagtcttgaacatcacttcagaagcagaact 5001732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 11792215 - 11792159
Alignment:
Q  47 tctctctctgttttatccgctgcattt-agtcctgaacatcacctcagaagtagaac 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11792215 tctctctctgttttatccgctgcattttagtcctgaacatcacttcagaagtagaac 11792159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 16317410 - 16317466
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  16317410 tctctctctattttatccgctgcatttagtcctgaacatcacttcagaagcagaact 16317466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 9069138 - 9069083
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc 69  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  9069138 gaacctgtataatcgatttgtgtctttcttctttctctctctgttttatccgctgc 9069083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13302239 - 13302184
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc 69  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  13302239 gaacctgtataattgctttgtgtctttcttctttctctctttattttatccgctgc 13302184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 14424678 - 14424594
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||| ||||||||||||||    ||||||||||||| ||||||| | ||||||||| |||||||||||||||    
T  14424678 aattgctttgtgtcttttttctttctctctctctgtttttatccgctgcaatttagttccgaacatcacttcagaagtagaactc 14424594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 13259257 - 13259314
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||    
T  13259257 tctctctctgttttatccgctgcatttagtccggaacatcactttagaagcagaactc 13259314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 13731459 - 13731547
Alignment:
Q  19 tgtataattgctttgtgtctttcttctt--tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||| | ||||| ||| | ||||| ||||||| |||||||    
T  13731459 tgtataattgctttgtgtctttcttctttctctctctctgttttatccactgctacttagttctggaaatcacttcagaagcagaactc 13731547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12175133 - 12175202
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||  |||||||||||||||||||||||  |||| ||||||||||| ||| ||||||||    
T  12175133 tttgtgtctttcttct--ctctctctgttttatccgctgcaactagttctgaacatcacttcaaaagtagaa 12175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 13138749 - 13138796
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  13138749 ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 13138796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 28623149 - 28623224
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||    |||||||||| ||||||| ||| |||| ||||||||||| |||||||||||||||    
T  28623149 aattgctttgtgtctttcttct----ctctctgttt-atccgctacatctagttctgaacatcacttcagaagtagaactc 28623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 331012 - 330970
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcattt 73  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  331012 ttgtgtctttcttctttttctctctgttttatccgctgcattt 330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 7858216 - 7858257
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaa 212  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7858216 tttcttcaagtattttacatgcatataagttttaatataaaa 7858257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 11318783 - 11318742
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  11318783 gaacctgtataattgctttgtgtctttcttctttctctctct 11318742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 13034666 - 13034723
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||    
T  13034666 tctctctctgttttatccgctgcaacttagtcatgaacatcacttcagaagtagaact 13034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 13261497 - 13261546
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  13261497 tgttttatccgctgcatttagtccggaacatcacttcagaagcagaactc 13261546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 19711796 - 19711864
Alignment:
Q  20 gtataattgctttgtgtctttcttctttc--tctctctgttttatccgctgcatttagtcctgaacatc 86  Q
    ||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||| ||| |||||    
T  19711796 gtataattgctttgtgtctctcttctctccttctctctgttttatccgctgcatctagttctggacatc 19711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 27871079 - 27871007
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||   |||||||| | ||||||||||||    
T  27871079 ttgtgtctttcttctctctttctctctgttttatccgctgcatttaggtatgaacatctcttcagaagtagaa 27871007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 33692536 - 33692593
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||||||| |||| ||||||||||| |||||||| ||||||    
T  33692536 tctctctctgttttattcgctgcatctagttctgaacatcacttcagaagtggaactc 33692593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 48237649 - 48237706
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||| ||||| |||| |||||| |||| |||||||||||||||    
T  48237649 tctctctctgttttatccgatgcatctagttctgaacttcacttcagaagtagaactc 48237706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 16155529 - 16155608
Alignment:
Q  24 aattgctttgtgtctttct--tctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||||||  |||||||||||||| |||||| ||||||  |||| || || ||||| ||||||||||||    
T  16155529 aattgctttgtgtctttctcttctttctctctctgatttatctgctgcaactagttctaaatatcacttcagaagtagaa 16155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 16546125 - 16546207
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgt---tttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||| |||||||||||||||| ||||||||| |   |||||||||||||  |||| || |||||||| ||||||||||||||    
T  16546125 aattgttttgtgtctttcttctctctctctctctctgtttatccgctgcaactagttctaaacatcacttcagaagtagaact 16546207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 16619537 - 16619455
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgt---tttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||| |||||||||||||||| ||||||||| |   |||||||||||||  |||| || |||||||| ||||||||||||||    
T  16619537 aattgttttgtgtctttcttctctctctctctctctgtttatccgctgcaactagttctaaacatcacttcagaagtagaact 16619455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 48063627 - 48063682
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||  |||| ||| | |||||||||||||||    
T  48063627 tctctctgttttatccgctgcatttagttatgaatatctcttcagaagtagaactc 48063682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 2914397 - 2914431
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||||||||    
T  2914397 tataattgctttgtgtctttcttctttctctctct 2914431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 16310777 - 16310823
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  16310777 tgttttatccgctgcattcagtcctgaacatcacttcagaagcagaa 16310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 16911696 - 16911750
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||| ||||||||||  |||| ||||||||||| ||||||||||||    
T  16911696 tctctctctgtttcatccgctgcaactagttctgaacatcacttcagaagtagaa 16911750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 24787739 - 24787682
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc 69  Q
    |||| |||||||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  24787739 gaacctgtataattgttgtgtgtctttcttctttctctctctctgttttatccgctgc 24787682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 4493953 - 4493912
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  4493953 gaacctgtataattgctttgtgtctttcttctctctctctct 4493912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 5001605 - 5001646
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  5001605 gaacctgtataattgctttgtgtctttcttctctctctctct 5001646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 13027678 - 13027719
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  13027678 gaacctgtatacttgctttgtgtctttcttctttctctctct 13027719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 13034617 - 13034658
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  13034617 gaacctgtataatttctttgtgtctttcttctttctctctct 13034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 13879548 - 13879507
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  13879548 gaacctgtataattgctttgtgtctttcttctatctctctct 13879507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 14424858 - 14424801
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| |||||||| ||||||| |   |||||||||||||||    
T  14424858 tctctctctgttttatccgctacatttagttctgaacaacttttcagaagtagaactc 14424801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 15467296 - 15467202
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctc----tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| | |||||||||||||| ||||||||    |||||||||| |||||| ||||  |||||||||| | |||||| ||||||    
T  15467296 gaacttgtataattgatatgtgtctttcttctctctctctctctatgttttatccactgcatctagttatgaacatcacttaagaagtggaactc 15467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 15705308 - 15705365
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||| |||||||||||||||| ||| | ||||||||| | |||||||||||||||    
T  15705308 tctctctatgttttatccgctgcaattaatactgaacatctcttcagaagtagaactc 15705365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 19340045 - 19340117
Alignment:
Q  32 tgtgtctttcttctttct--ctctctgttt-tatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||| |||  |||||||||  ||||||||||||||||| ||||||||| | ||||||||||||    
T  19340045 tgtgtctttcttctctctttctctctgttcgtatccgctgcatttagttctgaacatctcttcagaagtagaa 19340117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 21211323 - 21211364
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  21211323 gaacttgtataattgctttgtgtctttcttctctctctctct 21211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 43728252 - 43728361
Alignment:
Q  153 aagagtaatcagtgctta-tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    |||||||||||||| ||| |||||| |||||||| |||| ||| |||| |||| |||||||||  |   ||| |||| ||||| |||||||| |||||||    
T  43728252 aagagtaatcagtgtttattttctttaagtatttcacatacatataagatttagtataaaaaatttgtcaacgtatcctagccgtatcgtattctaaatt 43728351  T
Q  252 ttaaaaaatt 261  Q
    | ||||||||    
T  43728352 taaaaaaatt 43728361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 44466425 - 44466368
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||| ||||||||||| ||||| |||||||||| ||||| ||||||||    
T  44466425 tctctctctgtttttatccgctgcatctagtcatgaacatcacttcagaggtagaact 44466368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 44466472 - 44466431
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  44466472 gaacctgtataattgctttgtgtctttcttctctctctctct 44466431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 26042787 - 26042727
Alignment:
Q  12 atgaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag 75  Q
    |||||| ||||||||||  ||||||||||||||||||||||| | ||||||| |||||||||||    
T  26042787 atgaacctgtataattg--ttgtgtctttcttctttctctctgt-ttttatctgctgcatttag 26042727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 2266376 - 2266435
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactca 105  Q
    |||||||||||||| ||||||||||||||||  |||||||  | ||||||||||||||||    
T  2266376 tctctctctgtttttatccgctgcatttagttatgaacatttcttcagaagtagaactca 2266435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 13138675 - 13138718
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgt 57  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||    
T  13138675 gaacctgtataattgctttgtgtctttcctctctctctctctgt 13138718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 47843544 - 47843501
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaa 214  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||    
T  47843544 tttcttcaagtattttacatacatataagttttattataaaaaa 47843501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 9099016 - 9099050
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  9099016 tataattgctttgtgtctttcttctctctctctct 9099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 9099822 - 9099856
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  9099822 tataattgctttgtgtctttcttctctctctctct 9099856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 13879487 - 13879430
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||| ||||||| ||||| |||||||||| |||||||||||||||    
T  13879487 tctctctctgtttttatctgctgcatctagtc-tgaacatcacttcagaagtagaactc 13879430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 14304613 - 14304661
Alignment:
Q  30 tttgtgtctttcttctttctctctctgtt---ttatccgctgcatttag 75  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||||    
T  14304613 tttgtgtctttcttctttctctctctttttacttatccgctgcatttag 14304661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 21382224 - 21382297
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||| |||||| |||  ||||||||| |||| ||||||||||||| ||||||||| | ||||||||||||    
T  21382224 ttgtgtctctcttctctctttctctctgttcttattcgctgcatttagttctgaacatctcttcagaagtagaa 21382297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 2499441 - 2499400
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||| |||||||| ||||||||||||||||||||    
T  2499441 gaacctgtataaatgctttgtatctttcttctttctctctct 2499400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 11792288 - 11792247
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  11792288 gaacctgtataattgttttgtgtctttcttctctctctctct 11792247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 12367516 - 12367557
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||| |||||||||| |||||||||    
T  12367516 gaacctgtataattgctttgtatctttcttctctctctctct 12367557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 13902395 - 13902432
Alignment:
Q  18 atgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  13902395 atgtataattgctttgtttctttcttctctctctctct 13902432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 16317333 - 16317374
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||| ||||||||||||||||||||| |||||||||    
T  16317333 gaacctgtatgattgctttgtgtctttcttctctctctctct 16317374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 22580067 - 22580124
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||| ||| ||||||| |||| ||||||||||  ||||||||||||||    
T  22580067 tctctctctgtttttatcagctgcatctagttctgaacatcagttcagaagtagaact 22580124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 30946228 - 30946277
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||| ||||| |||| ||||||||||| ||||| |||||||||    
T  30946228 tgttttatccgttgcatctagttctgaacatcacttcagacgtagaactc 30946277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 35954725 - 35954782
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||| |||||||||||||  |||| ||||| ||||| ||||||||| |||||    
T  35954725 tctctctctgatttatccgctgcaactagttctgaatatcacttcagaagtaaaactc 35954782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 39285282 - 39285323
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  39285282 gaacctgtataattgttttgtgtctttcttctctctctctct 39285323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 47278272 - 47278301
Alignment:
Q  175 ttcaagtattttacatgcatgtaagtttta 204  Q
    ||||||||||||||||||||||||||||||    
T  47278272 ttcaagtattttacatgcatgtaagtttta 47278301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 48806695 - 48806751
Alignment:
Q  49 tctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||| ||||||||||||| |||| |||||||||   |||||||||||||||    
T  48806695 tctctctgttcttatccgctgcatctagttctgaacatctattcagaagtagaactc 48806751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 26367130 - 26367220
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||    
T  26367130 gaacttgtataattgctttgtatctttcttctttctctctctgttttatccgctgcaattagtcctgaatatcacttcagaagtaaaactc 26367220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 21537908 - 21538000
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctc--tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  21537908 gaacctgtataattgctttgtgtctttcttctttctctctctctgttttatctgctgcatttagtcatgaacatcacttcagaagtagaactc 21538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 22316970 - 22316881
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||| ||| |||||||| |||||    
T  22316970 gaacttgtataattgctttgtgtctttcttctttctctctctattttatccgctgcatatagttatgaacaccacttcagaagtggaact 22316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 292
Target Start/End: Original strand, 7018151 - 7018291
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    ||||||||||| || |||||| ||||||||||||||||| ||||||||||||| ||||||||   |  |||| |||||||||| ||||||||||||||||    
T  7018151 aagagtaatcaatgtttattttcttcaagtattttacatacatgtaagttttagtataaaaattttgttaacgtatcttagccgtatcgtatcctaaatt 7018250  T
Q  252 ttaaaaaatttatatatccgtatatctgtatcgcatcgtac 292  Q
    | |||||| | || ||| |||||| |||||||  |||||||    
T  7018251 taaaaaaaatcatgtattcgtatacctgtatcatatcgtac 7018291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 10010474 - 10010563
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||| | ||||| |||||||    
T  10010474 gaacctgtataattgctttgtgtctttcttc--tctctctctgttttatccgctgctatttagttctgaacatcactttagaagcagaactc 10010563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 19539794 - 19539703
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt--tctctctctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    |||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  19539794 gaacctgtataattgctttgtgtctttcttcttcctctctctctgtttttatccgctgcaatctagtcctgaacatcacttcagaagtagaa 19539703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 39038364 - 39038453
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||| |||||||| |||||||||| ||||||||| |||||    
T  39038364 gaacatgtataattgatttgtatctttcttc--tctctctctgttttatccgctgcaatttagtcttgaacatcacttcagaagtataactc 39038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 22455682 - 22455772
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||| || | ||||||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  22455682 gaacatgtataattgctttgtgtctttctcctctttctctct-ttttatctgctgcaatttagtcatgaacatcacttcagaagtagaactc 22455772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 16494708 - 16494633
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  16494708 ttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 16494633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 22188830 - 22188919
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctct----ctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||||||||| |||||    ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||    
T  22188830 tgtataattgctttgtgtctttcttctctctctttctctctgtttttatccgctgcatctagttctgaacatcacttcagaagtagaact 22188919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 28141324 - 28141415
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||| || |||||||  ||| ||| |||||||    
T  28141324 gaacatgtataattactttgtgtatttcttctttctctctctgttttatccgttgctatttagttctaaacatcaattcacaagcagaactc 28141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 24778675 - 24778626
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24778675 tctctctctgttttatccgctgcatttagtcctgaacatcacttcagaag 24778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 44839794 - 44839719
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||   |||||||||||||||    
T  44839794 ttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatcttttcagaagtagaactc 44839719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 22801832 - 22801761
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  |||||||||||||||||||||||  |||| ||||||||||| | |||||||||||||    
T  22801832 ttgtgtctttcttct--ctctctctgttttatccgctgcaactagttctgaacatcactttagaagtagaactc 22801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 38780775 - 38780686
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgtttt--atccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||| |||||||||||||||| ||||||||| | |   ||||||||||| | |||||||||||||| ||||| ||||||    
T  38780775 gaacatgtataattgttttgtgtctttcttctctctctctctctctctcatccgctgcatctcgtcctgaacatcacttcagatgtagaa 38780686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 40331471 - 40331400
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| |||| |||| | |||||||||||||||    
T  40331471 ttgtgtctttcttct--ctctctctgttttatccgctgcagttagttctgatcatctcttcagaagtagaactc 40331400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 24851436 - 24851485
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  24851436 tgttttatccgctgcatttagttctgaacatcacttcagaagtagaactc 24851485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 20569473 - 20569554
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||| ||| | ||||| |||||||    
T  20569473 gaacctgtataattgctttgtgtctttcttctttctctctc--ttttatccgttgctatttagttctggaaatcacttcagaag 20569554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 24575406 - 24575327
Alignment:
Q  20 gtataattgctttgtgtctttcttctttctc--tctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||| ||| | ||||| |||||||    
T  24575406 gtataattgctttgtatctttcttctttctctatctctgttttatccgctgctatttagttctggaaatcacttcagaag 24575327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 25188776 - 25188689
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||| ||| ||||||||||||||||    ||||||||||||||||||||| |||| |||| |||||||| |||||||| ||||||    
T  25188776 gaacctgtatacttgttttgtgtctttcttct----ctctctgttttatccgctgcaattagatcctaaacatcacttcagaagtggaactc 25188689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 1587787 - 1587847
Alignment:
Q  43 tctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  1587787 tcttcctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 1587847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 28551658 - 28551734
Alignment:
Q  31 ttgtgtctttcttcttt--ctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |  ||||||||||||| |||||||||| ||||| ||||||||| | |||||||||||||||    
T  28551658 ttgtgtctttcttctctatctctctctgtttttatccgctgcaattagttctgaacatctcttcagaagtagaactc 28551734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 34322671 - 34322741
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||| ||||||||  |||||||||||||||||||| || ||||| ||||||||| | ||||||||||||||    
T  34322671 ttgtgtatttcttct--ctctctctgttttatccgctacaattagttctgaacatctcttcagaagtagaact 34322741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 40331148 - 40331075
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||||| || | |||| | |||||||||||||||    
T  40331148 ttgtgtctttcttctctctctatcagttttatccgctgcagttagttctaatcatctcttcagaagtagaactc 40331075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 40780653 - 40780596
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||| |||||||| |||||||||||||| |||||||||| ||||||| |||||||    
T  40780653 tctctctgtgttttatgcgctgcatttagtcttgaacatcacttcagaagcagaactc 40780596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 22782388 - 22782444
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||||||||||||| ||||| |||||| || | ||||||||||||||    
T  22782388 tctctctctgttttatccgctgcaattagttctgaacgtctcttcagaagtagaact 22782444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 26352922 - 26353025
Alignment:
Q  153 aagagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattt 252  Q
    ||||||||||| ||||||||| ||||||||||||||||| || ||| ||||| |||||| |   |  |||| |||||||||| ||| ||||||| |||||    
T  26352922 aagagtaatcaatgcttattttttcaagtattttacatg-atataaattttagtataaatattttgttaacgtatcttagccgtatggtatcctgaattt 26353020  T
Q  253 taaaa 257  Q
    |||||    
T  26353021 taaaa 26353025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 22786395 - 22786469
Alignment:
Q  32 tgtgtctttcttctttctctctctgt--tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||||| |||  ||||||||||||| ||||| |||||| || | |||||||||||||||    
T  22786395 tgtgtctttcttctctctctctgtgtgttttatccgctgcaattagttctgaacgtctcttcagaagtagaactc 22786469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 40498832 - 40498922
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaattt 262  Q
    |||||||||||||||||||| ||| ||||||||| ||||||     |  |||| |||||||||  |||||||||||||||||||||||||||    
T  40498832 tttcttcaagtattttacatacatataagttttagtataaattttttt-taacgtatcttagctgtatcgtatcctaaattttaaaaaattt 40498922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 27296813 - 27296764
Alignment:
Q  23 taattgctttgtgtctttcttct--ttctctctctgttttatccgctgca 70  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  27296813 taattgctttgtgtctttcttctctttccctctctgttttatccgctgca 27296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 40364020 - 40364110
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatt 261  Q
    |||||||||||||||||| | ||| ||||||||| ||||||     |  |||| |||||||| | ||||||||||||||||||||||||||    
T  40364020 tttcttcaagtattttacgtacatataagttttagtataaattttttgttaacgtatcttagtcgtatcgtatcctaaattttaaaaaatt 40364110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 13085226 - 13085267
Alignment:
Q  236 tatcgtatcctaaattttaaaaaatttatatatccgtatatc 277  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  13085226 tatcgtatcctaaatttaaaaaaatttatatatccgcatatc 13085267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 24838483 - 24838442
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  24838483 gaacatgtataattgatttgtgtctttcttctctctctctct 24838442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 25828540 - 25828499
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  25828540 gaacctgtataattggtttgtgtctttcttctttctctctct 25828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 35429179 - 35429280
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| | ||||||| || | |||   || ||||||||||||| ||||| | ||||||| ||    
T  35429179 aagagtaatcaatgcttattttcttcaagtattgtacatgcatattagttttagtacacaaattttattaacatatcttagtcatattgcatcctaactt 35429278  T
Q  252 tt 253  Q
    ||    
T  35429279 tt 35429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 45087744 - 45087804
Alignment:
Q  39 ttcttctt-tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagta 98  Q
    |||||||| ||||||||||||||||||| ||||  |||| ||||||||||| |||||||||    
T  45087744 ttcttcttctctctctctgttttatccgttgcaactagttctgaacatcacttcagaagta 45087804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 6392024 - 6391953
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||  ||||||| |||| ||||||||||  ||||  |||||||||| |||||||||||||||    
T  6392024 tttgtgtctttcttct--ctctctccgttt-atccgctgcaagtagttatgaacatcacttcagaagtagaactc 6391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 17329063 - 17329153
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatt 261  Q
    ||||||||||||||| |||| ||  ||||||||| |||||||||  |  |||| |||||  ||  ||||||||||||||||| ||||||||    
T  17329063 tttcttcaagtatttcacatacaaataagttttagtataaaaaatttgttaacgtatctcggctgtatcgtatcctaaatttaaaaaaatt 17329153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 17964058 - 17964116
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||| ||||| ||||||| ||| | ||||||||||||| |||||||    
T  17964058 tctctctctgttttatctgctgctatttagttctggaaatcacctcagaagcagaactc 17964116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 28701991 - 28702037
Alignment:
Q  58 tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||  |||| ||||||||||| |||||||||||||||    
T  28701991 tttatccgctgcaactagttctgaacatcacttcagaagtagaactc 28702037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 31968532 - 31968586
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||||||||||| ||||| |||||| ||   ||||||||||||    
T  31968532 tctctctctgttttatccgctgcaattagttctgaacttctattcagaagtagaa 31968586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 38631131 - 38631072
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct----tctttctctctctgttttatccgctgc 69  Q
    |||| |||||||||| |||||||||||||    ||| |||||||||||||||||||||||    
T  38631131 gaacttgtataattgttttgtgtctttcttctctctctctctctctgttttatccgctgc 38631072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 23234387 - 23234346
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  23234387 gaacctgtataattgctttgtgtcattcttctctctctctct 23234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 24376484 - 24376451
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttcttt 47  Q
    |||| |||||||||||||||||||||||||||||    
T  24376484 gaacctgtataattgctttgtgtctttcttcttt 24376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 26623176 - 26623217
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  26623176 gaacatgtataattgctgcgtgtctttcttctctctctctct 26623217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 29952213 - 29952305
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29952213 gaacctgtataattgctttgtgtctttcttttttctctttctctgttttatccgttgcatttagtcctgaacatcacttcagaagtagaactc 29952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 30001367 - 30001459
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  30001367 gaacctgtataattgctttgtgtctttcttttttctctttctctgttttatccgttgcatttagtcctgaacatcacttcagaagtagaactc 30001459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 45472808 - 45472932
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatcc 270  Q
    |||||||||||||||||||| ||| ||||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  45472808 tttcttcaagtattttacatacatataagttttaatataaaaattttgttaacatatcttagccatatcgtatcctaaattttaaaaaattcgcatatcc 45472907  T
Q  271 gtatatctgtatcgcatcgtactcg 295  Q
    |  || | |||||| ||||||||||    
T  45472908 gcgtacccgtatcgtatcgtactcg 45472932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 13823449 - 13823360
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||    
T  13823449 gaacatgtataattgctttgtatctttcttttctctctctctgttttatccgctgcatctagtcctgaagatcacttcagaattagaact 13823360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 25399036 - 25399123
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||| |||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  25399036 tgtataattgttttgtgtctttcttctctctttctctctgttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 25399123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22804806 - 22804889
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||    
T  22804806 tataattgctttgtgtcctccttctttctctctctgttttatccgctgcaattagacctgaacatcacttcaaaagtagaactc 22804889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 41494381 - 41494291
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||| |||||| |||||| ||||||||    
T  41494381 gaacctgtataattgctttgtgtctttcttccatctctctctgtttaatccgctgcatctagtcctgagcatcacttcagaaatagaactc 41494291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 20645535 - 20645451
Alignment:
Q  15 aacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||| |||||||    
T  20645535 aacatgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttctgaacatcacttcagaag 20645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 6090109 - 6090017
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  6090109 gaacctgtataatggctttgtgtctttcttctttctctctctgtttttatccgctgcaagttagtcccgaacatcacttcagaagtagaactc 6090017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 38178417 - 38178513
Alignment:
Q  12 atgaacatgtataattgctttgtgtctttcttctttctc----tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||| ||||||||| ||||||||||||||||| ||||    ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  38178417 atgaacctgtataattactttgtgtctttcttctctctctctctctctgttttatccgctgcatatagtcctgaacatcacttcagaagaagaactc 38178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 2025455 - 2025381
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||||||||    
T  2025455 tttgtgtctttcttctttctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaactc 2025381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 14968741 - 14968658
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||| ||||||   |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  14968741 tgtataattgctttgtgtccttcttca--ctctctctattttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 14968658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 19885889 - 19885946
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19885889 tctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactc 19885946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 12963862 - 12963938
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct--tctttctctctctgttttatccgctgcatttagtcctgaacatcac 88  Q
    |||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||| |||||    
T  12963862 gaacctgtataattgctttgtgtctttcttctctctctctctctgttttatccgctacatttagtcctgaatatcac 12963938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 17239699 - 17239797
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctc--------tctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  17239699 gaacctgtataattgctttgtgtctttcttctctctctctctctctctctgttttatccgctgcatttagtcctgaacatcacttcaaaagcagaactc 17239797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 2560568 - 2560474
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||||||||||||    |||||||| |||| | ||||||||||||||||| ||| |||||||||||    
T  2560568 gaacctgtataattgctttgtgtctttcttctttctctctctctgtttttatcctctgcaagttagtcctgaacatcacttcaaaagtagaactc 2560474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 30054975 - 30055044
Alignment:
Q  33 gtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  30054975 gtgtctttcttct--ctctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 30055044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 14393806 - 14393863
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  14393806 tctctctctattttatccgatgcatttagtcctgaacatcacttcagaagtagaactc 14393863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3238074 - 3237998
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttcttt-ctctctctgttttatccgctgcat-ttagtcctgaacatcac 88  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  3238074 gaacctgtataattgctttgtgtccttcttcttttctctctctgttttatccgctgcatactagttctgaacatcac 3237998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 40850342 - 40850267
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||| | ||||||||| | |||||||||||||||    
T  40850342 ttgtgtctttcttctctctttctctctgttttatccgctgcatttaattctgaacatctcttcagaagtagaactc 40850267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 31302731 - 31302638
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||| | || ||||||    ||||||||||||||| |||| |||||| |||| | |||||||||||||    
T  31302731 gaacatgtataattgctttgtgtctttcttatctcgctctctctatttttatccgctgcatatagttctgaacgtcactttagaagtagaactc 31302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 47406209 - 47406285
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||    |||||||||||||||||||||| |||| ||||||||||| ||| |||||| ||||    
T  47406209 aattgctttgtgtctttcttct----ctctctgttttatccgctgcatctagttctgaacatcacttcacaagtagcactc 47406285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 50299597 - 50299530
Alignment:
Q  34 tgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||| ||||||||||||||||||||||||  |||| ||||||||||  ||||||||||||    
T  50299597 tgtctttcttctctctctctctgttttatccgctgcaactagttctgaacatcagttcagaagtagaa 50299530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 12727019 - 12727101
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |  || || |||||||||| ||||||||||||    
T  12727019 tataattgttttgtgtctttcttctttctctctctgtttttatccgctgcaagatattcttgaacatcacttcagaagtagaa 12727101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 49669281 - 49669354
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||| ||||| ||| | |||||||||||||||    
T  49669281 tttgtgtctttcttctctctctctctgttttatccactgcaattagt-ctgaatatctcttcagaagtagaactc 49669354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 19889750 - 19889807
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||    
T  19889750 tctctctctgttttattcgctgcatttagtcctggacatcacttcagaagcagaactc 19889807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 22128460 - 22128375
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||| ||||||||||||  |||||| |||||||||||||| ||   |||||||||||||| |||||||||||||||    
T  22128460 gaacctgtataattgttttatgtctttcttct--ctctctgtgttttatccgctgtat---gtcctgaacatcacttcagaagtagaactc 22128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 46797188 - 46797263
Alignment:
Q  30 tttgtgtctttcttctttctct--ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  46797188 tttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 46797263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 52283161 - 52283084
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||  ||||  |||||||||| |||||||||||||||    
T  52283161 aattgctttgtgtctttcttct--ctctctctgttt-atccgctgcaggtagttatgaacatcacttcagaagtagaactc 52283084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 1241886 - 1241940
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  1241886 tctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtagaa 1241940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 13781363 - 13781420
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt--tctctctctgttttatccgctgc 69  Q
    |||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  13781363 gaacctgtataattgttttgtgtctttcttctttctctctctctgttttatccgctgc 13781420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13939278 - 13939221
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc 69  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  13939278 gaacttgtataattgctttgtgtctttcttctttctctctctctgttttatctgctgc 13939221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 20628273 - 20628330
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||| |||||||||||||||    
T  20628273 tctctctctattttatccgttgcatctagttctgaacatcacttcagaagtagaactc 20628330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 49643544 - 49643632
Alignment:
Q  19 tgtataattgctttgtgtctttcttc--tttctctctctgttttatccgctg-catttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||||  ||||||| ||| | ||||| ||| ||| |||||||    
T  49643544 tgtataattgctttgtgtctttcttccttctctctctctgttttatccgctgttatttagttctggaaatcacttcataagcagaactc 49643632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 53057516 - 53057593
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||| |||  |||||| ||||| |||||||||| |||||  |||||||||| |||||||||||||||    
T  53057516 aattgctttgtgtctttcatct--ctctctttgttt-atccgctgcaattagttatgaacatcacttcagaagtagaactc 53057593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 6174717 - 6174677
Alignment:
Q  15 aacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  6174717 aacatgtataattgctttgtgtctttcttctctctctctct 6174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 21640184 - 21640128
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||||||||||||| ||||| ||||| ||| | ||||||||||||||    
T  21640184 tctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaact 21640128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 22463846 - 22463898
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||||||||    
T  22463846 tctctctgttttatccgctgcatctagttctgaacatctcttcagaagtagaa 22463898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 22465304 - 22465356
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||||||||    
T  22465304 tctctctgttttatccgctgcatctagttctgaacatctcttcagaagtagaa 22465356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 40799227 - 40799179
Alignment:
Q  56 gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  40799227 gttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 40799179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 8874902 - 8874985
Alignment:
Q  19 tgtataattgctttgtgtctttct-----tctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||||| ||||||||||||| |||     ||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  8874902 tgtatacttgctttgtgtctctctctctctctctctctctctgttttatccactgccatttagtcctgaacatcacttcagaag 8874985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 28581427 - 28581380
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcaga 94  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  28581427 tctctctctgttttatccgctgcatctagttctgaacatcacttcaga 28581380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 47207003 - 47206952
Alignment:
Q  53 tctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||| |||| || |||||||| |||||||||||||||    
T  47207003 tctgttttatccgctgcatctagttctaaacatcacttcagaagtagaactc 47206952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 52203774 - 52203670
Alignment:
Q  157 gtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaa 255  Q
    ||||| ||||||||||| |||||||| ||||||||  || ||||||||| |||||||    |  |||| ||||||||||  |||||||||||||||||||    
T  52203774 gtaattagtgcttattttcttcaagtgttttacat--atataagttttagtataaaatttttgttaacgtatcttagccgaatcgtatcctaaattttaa 52203677  T
Q  256 aaaattt 262  Q
    |||||||    
T  52203676 aaaattt 52203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 2782832 - 2782778
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||| |||||||  |||| ||||||||||| ||||||||||||    
T  2782832 tctctctctgttttattcgctgcaactagttctgaacatcacttcagaagtagaa 2782778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 2783222 - 2783168
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||| |||||||  |||| ||||||||||| ||||||||||||    
T  2783222 tctctctctgttttattcgctgcaactagttctgaacatcacttcagaagtagaa 2783168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 9700847 - 9700904
Alignment:
Q  43 tctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| | ||||||||||||    
T  9700847 tctttctctctat-ttttatccgctgcatttagttctgaacatctcttcagaagtagaa 9700904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 11189340 - 11189282
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| || |||||||| |||||||||||||||| ||| |||||||||||    
T  11189340 tctctctctgtttttattcgctgcatatagtcctgaacatcacttcataagtagaactc 11189282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 18122458 - 18122516
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||| | ||||| |||||||||||||||| |||||||||||||||    
T  18122458 tctctctctgtttttatctgttgcatctagtcctgaacatcacttcagaagtagaactc 18122516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 24776334 - 24776380
Alignment:
Q  58 tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  24776334 tttatccgctgcaattagttctgaacatcacttcagaagtagaactc 24776380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 21639094 - 21639150
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||| |||| ||||| ||||||||| | |||||||||||||||    
T  21639094 tctctctctgttttatccgttgcaattagt-ctgaacatctcttcagaagtagaactc 21639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 51257724 - 51257805
Alignment:
Q  177 caagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    ||||||||||| |||||| ||||||||| |||| ||||  || |||||| ||||||   ||||| |||||||||||||||||    
T  51257724 caagtattttatatgcatttaagttttattatacaaaaattattaacatgtcttagttgtatcgcatcctaaattttaaaaa 51257805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 21854015 - 21854118
Alignment:
Q  153 aagagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattt 252  Q
    ||||||||| | ||||| ||| ||||| |||||||||||||| ||| ||||| |||||| |   |  || | ||||||||||||||| ||||||||||||    
T  21854015 aagagtaattaatgctttttt-ttcaaatattttacatgcatataaattttactataaatattttgttatcgtatcttagccatatcatatcctaaattt 21854113  T
Q  253 taaaa 257  Q
    |||||    
T  21854114 taaaa 21854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 15902578 - 15902485
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct---ctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| |||||||||||||||||||||||||||| | ||   |||||||||||| ||| | ||||||| ||| | ||||| ||||||| ||||||    
T  15902578 gaacctgtataattgctttgtgtctttcttcttgccctctcctctgttttatctgctactatttagttctggaaatcacttcagaagcagaact 15902485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 10849966 - 10849932
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  10849966 tataattgctttgtgtctttcttctctctctctct 10849932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 16031850 - 16031792
Alignment:
Q  47 tctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||| ||||| |||| |||||||||| || |||||||| ||||||    
T  16031850 tctctctctgttttatccactgcaattagatcctgaacattacttcagaagtggaactc 16031792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 18122396 - 18122430
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  18122396 tataattgctttgtgtctttcttctctctctctct 18122430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 39614855 - 39614797
Alignment:
Q  153 aagagtaatcagtgcttattt-cttcaagtattttacatgcatgtaagttttaatataa 210  Q
    ||||||||||| ||||||||| |||||| |||||||||| ||| ||| |||||||||||    
T  39614855 aagagtaatcaatgcttattttcttcaaatattttacatacatataaattttaatataa 39614797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 1728829 - 1728882
Alignment:
Q  49 tctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||| |||||||||||||||||| ||||| ||| | ||||||||||||    
T  1728829 tctctctgttcttatccgctgcatttagttctgaaaatctcttcagaagtagaa 1728882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 6252803 - 6252762
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  6252803 gaacctgtataattgatttgtgtctttcttctctctctctct 6252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 11222141 - 11222085
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||||||||  |||| ||||||||||| | |||||||||||||    
T  11222141 tctctctctgttt-atccgctgcaactagttctgaacatcactttagaagtagaactc 11222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 11222893 - 11222837
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||||||||  |||| ||||||||||| | |||||||||||||    
T  11222893 tctctctctgttt-atccgctgcaactagttctgaacatcactttagaagtagaactc 11222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12967690 - 12967610
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaag 96  Q
    |||| |||||||||| |||||||||||||||| ||| | |   ||||||||||||||||||| | ||||| ||||| |||||||    
T  12967690 gaacttgtataattgatttgtgtctttcttctctctatgt---ttttatccgctgcatttagattctgaatatcacttcagaag 12967610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 13410814 - 13410855
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  13410814 gaacatgtataattgctttgtgtctttctcttctctctctct 13410855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 19885832 - 19885873
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  19885832 gaacctgtataattgttttgtgtctttcttctctctctctct 19885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 19889697 - 19889730
Alignment:
Q  22 ataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||| |||||||||    
T  19889697 ataattgctttgtgtctttcttctctctctctct 19889730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 26016155 - 26016118
Alignment:
Q  220 taacatatcttagccatatcgtatcctaaattttaaaa 257  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  26016155 taacatatcttagcaatatagtatcctaaattttaaaa 26016118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 26418453 - 26418494
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  26418453 gaacctgtataattgctttgtgtctttcttttctctctctct 26418494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 28581488 - 28581447
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||| ||| |||||||||    
T  28581488 gaacctgtataattgctttgtgtctttcctctctctctctct 28581447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 46350623 - 46350709
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||||||| ||||||||    || ||||||||||| ||||||| |||| ||| ||||||  ||| |||||||||||    
T  46350623 gaacctgtataattgatttgtgtatttcttct----ctttctgttttatctgctgcatctagttctgcacatcatttcaaaagtagaactc 46350709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 49554341 - 49554378
Alignment:
Q  67 tgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  49554341 tgcatctagtcctgaacatcacttcagaagtagaactc 49554378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 14393750 - 14393786
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||| |||||||||| |||||||||    
T  14393750 tgtataattgctttgtttctttcttctctctctctct 14393786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 14954755 - 14954699
Alignment:
Q  48 ctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||| ||||  |||| || ||||| || |||||||||||||||    
T  14954755 ctctctctgttttatccgttgcaactagttcttaacattacttcagaagtagaactc 14954699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 19250133 - 19250169
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||| |||||||||||||||| |||||||||    
T  19250133 tgtataattgttttgtgtctttcttctctctctctct 19250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 22770633 - 22770673
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctc 54  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  22770633 gaacctgtataattgttttgcgtctttcttctttctctctc 22770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 35296686 - 35296726
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaa 211  Q
    |||||||||||||||||||| ||||||| ||||| ||||||    
T  35296686 tttcttcaagtattttacatacatgtaaattttagtataaa 35296726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 36171996 - 36171917
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    ||||||||||||||||| ||| | ||| |||||| ||  |  |||  |||||||||||||||||||||| |||||||||||    
T  36171996 aagtattttacatgcatataaatattagtataaataatttgttaaagtatcttagccatatcgtatcct-aattttaaaaa 36171917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 52919842 - 52919806
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||| |||||||||| |||||||||||    
T  52919842 tgtataattgctttttgtctttcttttttctctctct 52919806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 20113408 - 20113495
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct--gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  20113408 tgtataattgctttgtgtctttcttctctctctctctcagttttatccgctgcatttagttctgaacatcacttcagaagtagaactc 20113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 16876276 - 16876195
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||    
T  16876276 aattgctttgtgtctttcttccttctctctctgtttttatccgctgcatttagttctgaacatcacttcagaagcagaactc 16876195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19623362 - 19623282
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaag 96  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||| |||||||    
T  19623362 gaacctgtataattgctttgtgtctttcttctttctctct--gttttatccgctgcaattagttctgaacatcacttcagaag 19623282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 22801512 - 22801430
Alignment:
Q  24 aattgctttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||| |||  |||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  22801512 aattgctttgtgtctttcttctctctttctctctcttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 22801430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 8486266 - 8486371
Alignment:
Q  152 caagagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaatt 251  Q
    ||||| |||||| ||||||||||||||| ||||||||||| || ||||||||| |||||||||  |  || | |||||||||| ||||||||||||||||    
T  8486266 caagattaatcaatgcttatttcttcaactattttacatgaatataagttttagtataaaaaa-ttgttatcgtatcttagccgtatcgtatcctaaatt 8486364  T
Q  252 ttaaaaa 258  Q
    |||||||    
T  8486365 ttaaaaa 8486371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 21624474 - 21624379
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgt-----tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||||||||||| |     || ||||||||||| || ||||||||||||| ||||||||| |||||    
T  21624474 gaacttgtataattgctttgtgtctttcttctttctctctctctctattttaatccgctgcatctattcctgaacatcacttcagaagtaaaactc 21624379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 19066803 - 19066876
Alignment:
Q  33 gtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  19066803 gtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 19066876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 13435260 - 13435172
Alignment:
Q  22 ataattgctttgtgtctttcttctttctctctct-----gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||| |||||      ||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  13435260 ataattgctttgtgtctttcttctttctatctctctcagtttttatccgctgcaagttagtcctgaacatcacttcagaagtagaactc 13435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 171 - 298
Target Start/End: Complemental strand, 2988040 - 2987913
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatcc 270  Q
    |||||||||||||||||||| ||| |||| |||| |||||      |  |||| |||||||||| |||||||||||||||||| ||||||| || |||||    
T  2988040 tttcttcaagtattttacatacatataaggtttagtataatgtttttgttaacgtatcttagccgtatcgtatcctaaattttgaaaaattcatgtatcc 2987941  T
Q  271 gtatatctgtatcgcatcgtactcgtac 298  Q
    || || | |||||| |||||||||||||    
T  2987940 gtgtacccgtatcgtatcgtactcgtac 2987913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 15986731 - 15986649
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||    | ||||||| |||||| ||||||| ||||||||||||||||| ||| |||||||||||    
T  15986731 tgtataattgctttgtgtctttctc---tatctctcttttttatacgctgcaattagtcctgaacatcacttcataagtagaactc 15986649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 16528693 - 16528602
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||||||||||| |||| | |||||||||||||||| || | |||||||| |||||||||| |||||| ||||||||    
T  16528693 gaacctgtataattgttttgtgtctttattctctttctctctgttttatccactccaatttagtcatgaacatcacttcagaaatagaactc 16528602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 25929861 - 25929779
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaag 96  Q
    |||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||   ||||||||||| |||||||    
T  25929861 gaacctgtataattgctttgtgtctttcttctctctctctgt-ttttatccgctgcatttagaatctgaacatcacttcagaag 25929779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 21234500 - 21234446
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  21234500 tctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaa 21234446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 25593451 - 25593394
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc 69  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25593451 gaacctgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgc 25593394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 16333073 - 16333016
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||    
T  16333073 tctctctctgttttatccgctggaattagttctgaacatcacttcagaagtagaactc 16333016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 20731511 - 20731568
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  20731511 tctctctctgttttatccgctgcatctagttttgaacatcacttcagaagtagaactc 20731568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 24116162 - 24116105
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||    
T  24116162 tctctctctgttttatccgctgcatttagtcttgaacattacttcagaagcagaactc 24116105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 29917410 - 29917325
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||| |||||||||    |||||||||||||||||| ||| |||||||||||||||  |||||||| ||||||    
T  29917410 gaacttgtataattgctttgtg-ctttcttct----ctctctgttttatccgctacatctagtcctgaacatcagttcagaagtggaactc 29917325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 32543607 - 32543550
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  32543607 tctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtggaactc 32543550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 13601549 - 13601454
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt----tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||||    ||||||||||||||||| ||||| | ||||| ||| | ||||| ||||||| |||||||    
T  13601549 gaacctgtataattgctttgtgtctttcttctttttctctctctctgttttatctgctgctacttagttctggaaatcacttcagaagcagaactc 13601454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 15301598 - 15301541
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc 69  Q
    |||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  15301598 gaacctgtataattgttttgtgtctttcttctttctctctctctgttttatccgctgc 15301541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 19952390 - 19952448
Alignment:
Q  47 tctctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||    
T  19952390 tctctctctgttcttatccgctgcatctagtcctgaacatgacatcagaagtagaactc 19952448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 22077177 - 22077233
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  22077177 tctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 22077233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 33353052 - 33353109
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| ||||| ||||| ||| | |||||||||||||||    
T  33353052 tctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaactc 33353109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 26941813 - 26941777
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  26941813 tgtataattgctttgtgtctttcttctttctctctct 26941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 18377761 - 18377714
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  18377761 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactc 18377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 14732884 - 14732941
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttct--ctctctgttttatccgctgc 69  Q
    |||| |||||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  14732884 gaacctgtataattgctttgtgtctttcttctttctcgctttctgttttatctgctgc 14732941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 21617613 - 21617540
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| ||||||| | ||||| |||||||| |||||  |||||||| | |||||||||||||||    
T  21617613 tttgtgtctttcttctctctctctat-ttttacccgctgcaattagttatgaacatctcttcagaagtagaactc 21617540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 18912776 - 18912704
Alignment:
Q  32 tgtgtctttcttctttct--ctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||| |||  ||||||||| ||||||||||||||||||  |||||||| | ||||||||||||    
T  18912776 tgtgtctttcttctctctttctctctgttcttatccgctgcatttagttatgaacatctcttcagaagtagaa 18912704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 19085476 - 19085419
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||  |||||||| ||||||| |||||| ||||||| |||||||    
T  19085476 tctctctctgttttatctactgcattttgtcctgaccatcacttcagaagcagaactc 19085419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 23296169 - 23296128
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  23296169 gaacctgtataattgctttgtgtctttcttctctctctctct 23296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 25592005 - 25591964
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  25592005 gaacctgtataattgctatgtgtctttcttctttctctctct 25591964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 18434916 - 18434880
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  18434916 tgtataattgctttgtgtctttcttctctctctctct 18434880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 19085536 - 19085500
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  19085536 tgtataattgctttgtgtctttcttctctctctctct 19085500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 19688076 - 19688021
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||| ||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  19688076 tctctctct-ttttatccgctgcatctagttttgaacatcacttcagaagtagaact 19688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 12041195 - 12041148
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||| ||||||||||| | |||||||||||||    
T  12041195 ttttatccgctgcatctagttctgaacatcactttagaagtagaactc 12041148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 12422575 - 12422528
Alignment:
Q  57 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  12422575 ttttatccgctgcaattagttctgaacatctcttcagaagtagaactc 12422528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 15532434 - 15532492
Alignment:
Q  47 tctctctctgt-tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||| ||||||| || ||| ||||| |||||||||| |||||||||||||||    
T  15532434 tctctctctgtgtttatccactacatctagtcttgaacatcacttcagaagtagaactc 15532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 17380896 - 17380850
Alignment:
Q  58 tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||| || |||||||| |||||||||||||||    
T  17380896 tttatccgctgcaattagttctaaacatcacttcagaagtagaactc 17380850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 14101204 - 14101245
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| ||| ||||||||||||||||||||||    
T  14101204 gaacctgtataattgatttatgtctttcttctttctctctct 14101245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 17876824 - 17876783
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||||| || |||||||||    
T  17876824 gaacttgtataattgctttgtgtctttctcctctctctctct 17876783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 19625193 - 19625152
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  19625193 gaacttgtataattgatttgtgtctttcttctctctctctct 19625152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 32335225 - 32335184
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||| |||||||| |||||    
T  32335225 gaacctgtataattgctttgtgtcttttttctttctttctct 32335184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 1929240 - 1929319
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    ||||||||||||||||| ||| ||||| |||||| ||  |  |||| ||||||| | |||||||||||| |||||||||||    
T  1929240 aagtattttacatgcatataaattttagtataaataatttgttaacgtatcttaactatatcgtatcct-aattttaaaaa 1929319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 2032128 - 2032088
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaa 211  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  2032128 tttcttcaagtattttacatacatataagttttattataaa 2032088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 3680496 - 3680464
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctt 46  Q
    |||| ||||||||||||||||||||||||||||    
T  3680496 gaacctgtataattgctttgtgtctttcttctt 3680464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 12283556 - 12283464
Alignment:
Q  168 ttatttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaat 260  Q
    |||||| || |||||||||||||| |  ||||||||| ||||||||   |  || ||||| |||||| |||| ||||||||||||| ||||||    
T  12283556 ttatttattaaagtattttacatgtaaataagttttagtataaaaactttgttagcatattttagccgtatcatatcctaaatttttaaaaat 12283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 17304045 - 17304120
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaag 96  Q
    |||||||||| |||||||||||||| ||||||| |   ||||| ||||||||||| | ||||||||||| |||||||    
T  17304045 tataattgctatgtgtctttcttctctctctct-ttacttatctgctgcatttagattctgaacatcacttcagaag 17304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 26588944 - 26588888
Alignment:
Q  49 tctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||| ||||||||||||| |||| |||||||||   |||||||||||||||    
T  26588944 tctctctgttcttatccgctgcatctagttctgaacatctattcagaagtagaactc 26588888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 7276 - 7184
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct--gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||  |||||||||| ||| |||||||||||    
T  7276 gaacctgtataattgctttgtgtctttcttctttctctctcttatttttatccgctgcatttagttgtgaacatcacttcaaaagtagaactc 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 20197 - 20287
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||    
T  20197 gaacctgtataattgttttgtatctttcttctctctttctctgttttatccgctgcatttagttctgaatatcacttcagaagcagaactc 20287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 110358 - 110414
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||| ||||| |||||  |||||||| | |||||||||||||||    
T  110358 tctctctctgttttatccactgcaattagt-ttgaacatctcttcagaagtagaactc 110414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 10756806 - 10756723
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  10756806 gaacatgtataattgatttgtgtctttcttct----ctctctgttttatccgctgcatttagttctgaacatcactccagaagtagaa 10756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 26702828 - 26702917
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaac 102  Q
    |||| |||||||||||||||| |||||||||| | ||||||||||||||||||||| || |||| ||||||||||| |||||||||||||    
T  26702828 gaacctgtataattgctttgtatctttcttctctttctctctgttttatccgctgcaatctagttctgaacatcacttcagaagtagaac 26702917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 22600884 - 22600978
Alignment:
Q  14 gaacatgtataattgctttgtgtctttct---tctttctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||| |||   ||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  22600884 gaacctgtataattgctttgtgtctctctctctctctctctctctgtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 22600978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 23037258 - 23037315
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  23037258 tctctctctgttttatccgctgcatctagtcctgaacatcacttcagaagtagaactc 23037315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 1899725 - 1899634
Alignment:
Q  18 atgtataattgctttgtgtctttcttctttctctctct-----gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||| |||||||||      ||||||||||||||| ||||| |||||||||| | |||||||||||||    
T  1899725 atgtataattgctttgtgtctttcttctctctctctctctctgtttttatccgctgcatctagtcatgaacatcactttagaagtagaactc 1899634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 44824473 - 44824544
Alignment:
Q  30 tttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  44824473 tttgtgtctttcttct--ctctctctgttttatccgctgcaattagttctgaacatctcttcagaagtagaact 44824544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 2834039 - 2833947
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct------gttttatccgctgcatttagtcctgaacatcacctcagaagtaga 100  Q
    |||| |||||||||| |||||||||||||||| |||||||||      |||||||||||||||| |||| ||||||||||| |||||||||||    
T  2834039 gaacttgtataattgttttgtgtctttcttctctctctctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtaga 2833947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 21121778 - 21121854
Alignment:
Q  30 tttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||| ||||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  21121778 tttgtgtccttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 21121854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 21983962 - 21983886
Alignment:
Q  30 tttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  21983962 tttgtgtctttcttttctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactc 21983886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 21215391 - 21215466
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||    
T  21215391 ttgtgtctttcttctgtctttctctctgttttatccgctgcatttagttctgaacatctcttcaaaagtagaactc 21215466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 46088354 - 46088279
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||   |||||||||||||||    
T  46088354 ttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatcttttcagaagtagaactc 46088279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 14264149 - 14264217
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||  |||||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  14264149 ttgtgtctttcttct--ctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtagaa 14264217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 36133586 - 36133498
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||| ||||||||||  |||||| | ||||||||||||||| |||||| ||||||||| ||| ||||| |||||    
T  36133586 gaacctgtataattgctttgtttctttcttct--ctctctgttttttatccgctgcatctagtcccgaacatcacttcataagtaaaactc 36133498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 16123101 - 16123163
Alignment:
Q  152 caagagtaatcagtgcttatttcttcaagtattttacatgcatgtaagttttaatataaaaaa 214  Q
    |||||||||||| || ||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  16123101 caagagtaatcaatgtttatttcttcaagtattttacatgcatataagtgttagtataaaaaa 16123163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 12283737 - 12283680
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||    
T  12283737 tctctctctgttttatccgctgcatttagtcctgaatatcatttcagaaggagaactc 12283680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 29215160 - 29215087
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||| |||||| ||| ||||||||||||||||||||| |||| ||||| ||||| |||||||| ||||||    
T  29215160 ttgtgtctctcttctctctttctctgttttatccgctgcatctagttctgaatatcacttcagaagtggaactc 29215087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 21135874 - 21135949
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||| ||||||| |||  ||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||    
T  21135874 ttgtgtccttcttctctctttctctctgttttatccgctgtatttagttctgaacatctcttcagaagtagaactc 21135949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 32786636 - 32786729
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttc----tttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    |||| ||||||||||||||||||||||||||    | ||||||||||||||||||||||||| || |   ||||||||| |||||||| |||||    
T  32786636 gaacctgtataattgctttgtgtctttcttctctttctctctctctgttttatccgctgcatctaattacgaacatcacttcagaagtggaact 32786729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 21205596 - 21205651
Alignment:
Q  49 tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||    
T  21205596 tctctctgttttatccgctgcatttagttctgaacatctcttcaaaagtagaactc 21205651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 1577194 - 1577136
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||    
T  1577194 tctctctctgtttttatccgctgcatctagtcctaaacatcacttcagaagtagaactc 1577136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 10250355 - 10250280
Alignment:
Q  30 tttgtgtctttcttctttctct--ctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||| | | |||||||||||||    
T  10250355 tttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacatctctttagaagtagaactc 10250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 11767556 - 11767467
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaat 260  Q
    |||||||||||||||||||| ||| || |||||| ||||||||   |  |||| ||||||| || |||||||||||||||||| ||||||    
T  11767556 tttcttcaagtattttacatacatatatgttttagtataaaaattttgttaacgtatcttaaccgtatcgtatcctaaattttgaaaaat 11767467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 30892409 - 30892352
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||| ||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  30892409 tctctctctattttatccgttgcatttagttctgaacatcactttagaagtagaactc 30892352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 22465509 - 22465549
Alignment:
Q  15 aacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22465509 aacatgtataattgctttatgtctttcttctttctctctct 22465549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 22428036 - 22428130
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctc--tctg-ttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||| |||||||||||||| ||||||||  |||| ||||||| ||||| | ||||| ||||||||||  |||||||||||||||    
T  22428036 gaacctgtataattgatttgtgtctttcttatttctctctatctgtttttatctgctgcaagttagttctgaacatcatttcagaagtagaactc 22428130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 2266430 - 2266373
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| ||||  |  ||||||| |||||||||||||||    
T  2266430 tctctctctgttttatccgctgcatctagttatatacatcacttcagaagtagaactc 2266373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 28492979 - 28493020
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  28492979 gaacctgtataattgctttgtgtctttcttctctctctctct 28493020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 31183803 - 31183896
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatccg 271  Q
    ||||||||||||||||| ||| |||||  ||||| |   |  |||| |||||||||| ||||||||||||||||||||||| |||  |||||||    
T  31183803 aagtattttacatgcatataaattttagaataaatattttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcatatccg 31183896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 33257049 - 33257090
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  33257049 gaacttgtataattgctttgtgtctttcttctctctctctct 33257090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 33277221 - 33277262
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  33277221 gaacttgtataattgctttgtgtctttcttctctctctctct 33277262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 38281948 - 38281907
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  38281948 gaacctgtataattgctttgtgtctttcttctatctctctct 38281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 48570987 - 48571044
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||||||| |||||  |||||||| | | |||||||||||||    
T  48570987 tctctctctgttttatccgctgcaattagttatgaacatctctttagaagtagaactc 48571044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 22202437 - 22202473
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22202437 tgtataattgctttgtgtctttcttctctctctctct 22202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 30892471 - 30892435
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  30892471 tgtataattgctttgtgtctttcttctctctctctct 30892435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 41828018 - 41828117
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatttatatatcc 270  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||    || |||| |||||||  | ||||||||||||||||| ||||||||| | |||||    
T  41828018 tttcttcaagtattttacatacatataagttttattat-aaatttttattaacttatcttaatcgtatcgtatcctaaatttaaaaaaatttgtgtatcc 41828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 50709801 - 50709880
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaa 258  Q
    ||||||||||||||||| ||| ||||| |||||| |   || |||| |||||||||| ||||||||||| |||||||||||    
T  50709801 aagtattttacatgcatataaattttagtataaatattttattaacgtatcttagccgtatcgtatcct-aattttaaaaa 50709880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 271319 - 271362
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaa 214  Q
    |||||||||||| |||||||| || |||||||||||||||||||    
T  271319 tttcttcaagtaatttacatgaatataagttttaatataaaaaa 271362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 22153172 - 22153113
Alignment:
Q  47 tctctctctgtttt-atccgctgcat-ttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||||||||  || |||||||||||||| |||||||||||||||    
T  22153172 tctctctctgtttttatccgctgcaagtttgtcctgaacatcacttcagaagtagaactc 22153113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 22202493 - 22202551
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||    
T  22202493 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactc 22202551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 22202615 - 22202673
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||    
T  22202615 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactc 22202673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 23053750 - 23053716
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||| ||||||||    
T  23053750 tataattgctttgtgtctttcttcttcctctctct 23053716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 25449333 - 25449379
Alignment:
Q  58 tttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| ||||| ||||||||||| ||||||||| |||||    
T  25449333 tttatccgctgcaattagttctgaacatcacttcagaagtataactc 25449379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 2137129 - 2137170
Alignment:
Q  153 aagagtaatcagtgcttatttcttcaagtattttacatgcat 194  Q
    ||||||||| | ||||||||| ||||||||||||||||||||    
T  2137129 aagagtaattaatgcttattttttcaagtattttacatgcat 2137170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9346160 - 9346119
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  9346160 gaacatgtataattgctttgtgtctttctcttatctctctct 9346119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 16236004 - 16236045
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  16236004 gaacctgtataattgttttgtgtctttcttctctctctctct 16236045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 30571537 - 30571489
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||||||    
T  30571537 tgttttatccgctgcattta-ttctgaacatctcttcagaagtagaactc 30571489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 38281699 - 38281651
Alignment:
Q  57 ttttatccgctgc--atttagtcctgaacatcacctcagaagtagaact 103  Q
    |||||||||||||  || |||||||||||||||| ||||||||||||||    
T  38281699 ttttatccgctgcgcatctagtcctgaacatcacttcagaagtagaact 38281651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 42283974 - 42283933
Alignment:
Q  60 tatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||| ||||||||| | ||||||||||||    
T  42283974 tatccgctgcatttagttctgaacatctcttcagaagtagaa 42283933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 18614292 - 18614260
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctct 53  Q
    ||||||||||||||||||||||||| |||||||    
T  18614292 tataattgctttgtgtctttcttctctctctct 18614260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 31513404 - 31513364
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaa 211  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  31513404 tttcttcaagtattttacatacatataagttttattataaa 31513364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 37640354 - 37640298
Alignment:
Q  49 tctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||| ||||||||||||| |||| |||||||||   |||||||||||||||    
T  37640354 tctctctgttcttatccgctgcatctagttctgaacatctattcagaagtagaactc 37640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 18408 - 18327
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaac 102  Q
    ||||||| ||||||| ||| ||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  18408 tataatttctttgtggcttccttctctctctctttgttttatccgctgcatttagttctgaacatcacttcagaagtggaac 18327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 22929 - 22978
Alignment:
Q  55 tgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||| |||||  |||||||| | |||||||||||||||    
T  22929 tgttttatccgctgcaattagttttgaacatctcttcagaagtagaactc 22978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 14501 - 14403
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct--------gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  14501 gaacctgtataattgctttgtgtctttcttctctctctctctctctctctgttttatccgctgcatttagtcctgaacatcacttcaaaagcagaactc 14403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 31969 - 31916
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgct 67  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31969 gaacctgtataattgctttgtgtctttcttctttctctctctgttttatccgct 31916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 10835 - 10929
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||| |||||||||||||||||||||||||    |||| |||||||| | ||||||||||||||||| |||||||||||||||    
T  10835 gaacctgtataattgcattgtgtctttcttctttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactc 10929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 15499 - 15593
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct---gttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||||||||| |||||||||||||||||||||||||    |||| |||||||| | ||||||||||||||||| |||||||||||||||    
T  15499 gaacctgtataattgcattgtgtctttcttctttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactc 15593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 8042 - 7983
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttag 75  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  8042 gaacatgtataattgctttgtgtctttcttc--tctctctctgttttatccgctgcaattag 7983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 211739 - 211658
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaa 95  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||| ||||||||||||| ||||||    
T  211739 gaacttgtataattgctttgtgtctttcttctttctctctgt-ttttatccgctgcaagttattcctgaacatcacttcagaa 211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 5493 - 5421
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  5493 ttgtgtctttcttctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcaaaagtagaactc 5421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 35490 - 35565
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||| ||||||||| | |||||||||||||||    
T  35490 ttgtgtctttcttctctctttctctctgttctatccgctgcatttagttctgaacatctcttcagaagtagaactc 35565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 26396 - 26471
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  |||||| || ||| |||||||||||||  |||||||| | ||||||||| |||||    
T  26396 ttgtgtctttcttctctctttctctctattctatacgctgcatttagttttgaacatctcttcagaagtataactc 26471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 18510 - 18581
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  ||||||||||||||||||||||| || || ||||||||| | |||||||||||||||    
T  18510 ttgtgtctttcttct--ctctctctgttttatccgctgcaatttgttctgaacatctcttcagaagtagaactc 18581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 717 - 771
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  717 tctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaa 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 38346 - 38256
Alignment:
Q  171 tttcttcaagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaatt 261  Q
    |||||||||||||||||||| ||| |||||||||||||||||||  |  |||| |||||||||| |||  |||||| ||||| ||||||||    
T  38346 tttcttcaagtattttacatacatataagttttaatataaaaaatttgttaacgtatcttagccgtattttatccttaatttaaaaaaatt 38256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 2037 - 1950
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctgtt---ttatccgctgcatttagtc-ctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||| ||||| ||| ||   ||||||||||||||||| | ||||||||||| |||||||| ||||||    
T  2037 tataattgctttgtgtctttcttctctctctttctctttacttatccgctgcatttagactctgaacatcacttcagaagttgaactc 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14344 - 14264
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||| ||| | ||||| |||||||    
T  14344 tgtataattgctttgtgtctttattctttctctctctctgttttatccgctgctatttagttctggaaatcacttcagaag 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 37473 - 37558
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||    ||||||||||| ||||||||||||| ||||||||||||||||  ||| ||| |||||||    
T  37473 gaacctgtataattgctttgtgtctttc----ttctctctctg-tttatccgctgcaattagtcctgaacatcaattcaaaagaagaactc 37558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 1386 - 1306
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctct--ctctgttttatccgctgc-atttagtcctgaacatcacctcagaag 96  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||| ||| | ||||| |||||||    
T  1386 tgtataattgctttgtgtctttattctttctctctctctgttttatccgctgctatttagttctggaaatcacttcagaag 1306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 1564 - 1639
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| |||  ||||||||||||||| || |||||||| ||||||||| | |||||||||||||||    
T  1564 ttgtgtctttcttctctctttctctctgttttatccactacatttagttctgaacatctcttcagaagtagaactc 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 24515 - 24594
Alignment:
Q  24 aattgctttgtgtctttcttctttctct--ctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtaga 100  Q
    ||||||| ||||||||||||| ||||||  ||||||||| |||||||||| ||||| ||||||||||| |||||||||||    
T  24515 aattgctctgtgtctttcttccttctctatctctgtttttatccgctgcaattagttctgaacatcacttcagaagtaga 24594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 11563 - 11489
Alignment:
Q  31 ttgtgtctttcttctttc--tctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||| ||  ||||| |||||||||||||||||||||| ||||||||| | |||||||| |||||    
T  11563 ttgtgtctttcttctctccttctctatgttttatccgctgcatttagttctgaacatctcttcagaagtggaact 11489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 378283 - 378373
Alignment:
Q  21 tataattgctttgtgtctttcttctt------tctctctctgttttatccgctgc-atttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||      ||||||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||    
T  378283 tataattgctttgtgtctttcttctttctctctctctctctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactc 378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 210765 - 210693
Alignment:
Q  33 gtgtctttcttctttctctctct--gttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||| |||||||||  ||||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  210765 gtgtctttcttctctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactc 210693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 219618 - 219527
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctctctct-----gttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||||||||| |||||||||      ||||||||||||| ||||| || |||| ||||| |||||||| ||||||    
T  219618 tgtataattgctttgtgtctttcttctctctctctctctctgtttttatccgctgcgtttagatcatgaatatcacttcagaagtggaactc 219527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 245008 - 245049
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  245008 gaacctgtataattgctttgtgtctttcttctctctctctct 245049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 2814 - 2741
Alignment:
Q  31 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactca 105  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||| ||| ||||| | ||||||||||||||||    
T  2814 ttgtgtctttcttctctctctctgt-ttttatccgctgcaattagttctggacatctcttcagaagtagaactca 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 6488 - 6546
Alignment:
Q  47 tctctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||| ||||||||||| ||||| |||||||||| |||||||||||||||    
T  6488 tctctctctgtttttatccgctgcatctagtcttgaacatcacttcagaagtagaactc 6546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 6417 - 6458
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  6417 gaacctgtataattgctttgtgtcattcttctctctctctct 6458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 2315 - 2258
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||||||||| ||| |||| | ||||||||| |||||||||||||||    
T  2315 tctctctctgttttatccgctacatctagttcagaacatcacttcagaagtagaactc 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9289 - 9248
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  9289 gaacctgtataattgctttgtgtctttcttctttctctctct 9248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 19419 - 19476
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  19419 tctctatctattttatccgctgcatctagttctgaacatcacgtcagaagtagaactc 19476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 3448 - 3505
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||| |||||||||||||| ||||| ||||||||| | |||||||||||||||    
T  3448 tctctctctattttatccgctgcaattagttctgaacatctcttcagaagtagaactc 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 7207 - 7121
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaac 102  Q
    |||| |||||||||| |||||||||| |||||  |||||||||||||||||| ||||| |||| ||  ||||||| |||||||| ||||    
T  7207 gaacctgtataattgatttgtgtcttccttct--ctctctctgttttatccggtgcatctagttctcgacatcacttcagaagtggaac 7121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 28155 - 28196
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  28155 gaacctgtataattgctttgtgtctttcttctttctctctct 28196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 8012 - 7971
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  8012 gaacatgtataattgctttgtgtctttcttctctctctctct 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 79112 - 79181
Alignment:
Q  36 tctttcttctttctctctctgttt-tatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||| ||||| ||||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||||    
T  79112 tcttccttctctctctctctttttctatccgctgcaattagttctgaacatcacttcagaagtagaactc 79181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1281 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1281
Description:

Target: scaffold1281; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 2113 - 2153
Alignment:
Q  15 aacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  2113 aacatgtataattgctttgtgtctttcttctctctctctct 2153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 88345 - 88420
Alignment:
Q  31 ttgtgtctttcttctttct--ctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||  ||  |||||||||||||||||||||  |||| ||||||||| | |||||||||||||||    
T  88345 ttgtgtctttcttctccctttctctctgttttatccgctgcaactagttctgaacatctcttcagaagtagaactc 88420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 16460 - 16533
Alignment:
Q  31 ttgtgtctttcttctttctctctctgt---tttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||||||||||||| ||||||||| |   ||||||||||||| ||||| ||||||||| | ||||||||||||    
T  16460 ttgtgtctttcttctctctctctctctgtttttatccgctgcaattagttctgaacatctcttcagaagtagaa 16533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 63711 - 63629
Alignment:
Q  24 aattgctttgtgtctttcttctttctctctc--tgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||||||||||| |||| ||||  |||||| |||||||||| ||||| ||||||| ||| || |||||||||||    
T  63711 aattgctttgtgtctttcttccttctttctccctgtttttatccgctgcaattagttctgaacaacacttctgaagtagaact 63629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 46037 - 45958
Alignment:
Q  24 aattgctttgtgt-ctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 103  Q
    ||||||||||||| ||| ||||||||||||| | |||||| ||||||| ||||| ||||||| ||| || |||||||||||    
T  46037 aattgctttgtgtgcttccttctttctctctgt-ttttatacgctgcaattagttctgaacaacacttctgaagtagaact 45958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 9340 - 9290
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctctg-ttttatccgctgca 70  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  9340 tataattgctttgtgtgtttcttctttgtctctctgtttttatccgctgca 9290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 18577 - 18543
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    |||||||||||||||||||||||||||||||||||    
T  18577 tataattgctttgtgtctttcttctttctctctct 18543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 17677 - 17623
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    |||||||||||||||||||||| |  |||| ||||||||||| ||||||||||||    
T  17677 tctctctctgttttatccgctggaactagttctgaacatcacttcagaagtagaa 17623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 379 - 420
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  379 gaacctgtataattgctttgtgtcattcttctttctctctct 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 446 - 488
Alignment:
Q  47 tctctctctgttttatccgctgc-atttagtcctgaacatcac 88  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  446 tctctctctgttttatccgctgcaagttagtcctgaacatcac 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9340 - 9299
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  9340 gaacctgtataattgctttgtgtcattcttctttctctctct 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 1042 - 1001
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  1042 gaacctgtataattgctttgtgtctttcttctctctctctct 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 2787 - 2828
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  2787 gaacttgtataattgctttgtgtctttcttctctctctctct 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 25765 - 25717
Alignment:
Q  57 ttttatccgctgcat-ttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  25765 ttttatccgctgcaagttagtcctgaacatcacttcagaagtagaactc 25717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 25843 - 25802
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||||||||||| ||| ||||||||||    
T  25843 gaacctgtataattgctttgtgtcttttttccttctctctct 25802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 2750 - 2796
Alignment:
Q  21 tataattgctttgtgtctttcttctt--tctctctctgttttatccg 65  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||    
T  2750 tataattgctttgtgtctttcttcttactttctctctgttttatccg 2796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 6027 - 6086
Alignment:
Q  43 tctttctctctctgtt-ttatccgctgcatttagtcctgaacatcacctcagaagtagaa 101  Q
    ||||| |||||||||| ||||||| |||||||||| ||||||||| | ||||||||||||    
T  6027 tctttttctctctgttcttatccgttgcatttagttctgaacatctcttcagaagtagaa 6086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 158528 - 158435
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttct----ttctctctctgttttatccgctgcatttag-tcctgaacatcacctcagaagtagaactc 104  Q
    |||| |||||||||||||||||||||||||||     ||||||| |||||||||||||||  |||| |  |||||||||| |||||||| ||||||    
T  158528 gaacctgtataattgctttgtgtctttcttctctccctctctctatgttttatccgctgc--ttagattatgaacatcacttcagaagtggaactc 158435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 73958 - 73924
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  73958 tataattgctttgtgtctttcttctctctctctct 73924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 102902 - 102844
Alignment:
Q  47 tctctctctgttttatccgctgcat-ttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||  ||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  102902 tctctctcttctttatccactgcaagttagtcctgaacatcacttcagaagtagaactc 102844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 102946 - 102912
Alignment:
Q  21 tataattgctttgtgtctttcttctttctctctct 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  102946 tataattgctttgtgtctttcttctctctctctct 102912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 2508 - 2549
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||||| |||||||||||| |||||||||    
T  2508 gaacctgtataattgctttttgtctttcttctctctctctct 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 7203 - 7244
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  7203 gaacctgtataattgttttgtgtctttcttctctctctctct 7244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 7309 - 7268
Alignment:
Q  14 gaacatgtataattgctttgtgtctttcttctttctctctct 55  Q
    |||| |||||||||||| |||||||||||||| |||||||||    
T  7309 gaacctgtataattgctatgtgtctttcttctctctctctct 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 145194 - 145270
Alignment:
Q  31 ttgtgtctttcttctttc--tctctctgtttt-atccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    ||||||||||||||| ||  |||||||||||| ||||| |||| ||||| |||| |||| | |||||||||||||||    
T  145194 ttgtgtctttcttctctcactctctctgtttttatccgttgcaattagttctgatcatctcttcagaagtagaactc 145270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 58943 - 58911
Alignment:
Q  19 tgtataattgctttgtgtctttcttctttctct 51  Q
    |||||||||| ||||||||||||||||||||||    
T  58943 tgtataattgatttgtgtctttcttctttctct 58911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 83707 - 83650
Alignment:
Q  47 tctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 104  Q
    |||||||||||||||||| |||||| |||| || ||||| || |||||||| ||||||    
T  83707 tctctctctgttttatccactgcatctagttctaaacataacttcagaagtggaactc 83650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 6275 - 6235
Alignment:
Q  224 atatcttagccatatcgtatcctaaattttaaaaaatttat 264  Q
    |||||||| |||||| ||||||||| |||||||||||||||    
T  6275 atatcttaaccatattgtatcctaacttttaaaaaatttat 6235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 14694 - 14654
Alignment:
Q  224 atatcttagccatatcgtatcctaaattttaaaaaatttat 264  Q
    |||||||| |||||| ||||||||| |||||||||||||||    
T  14694 atatcttaaccatattgtatcctaacttttaaaaaatttat 14654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 53877 - 53960
Alignment:
Q  178 aagtattttacatgcatgtaagttttaatataaaaaacctactaacatatcttagccatatcgtatcctaaattttaaaaaattt 262  Q
    ||||||||||||||||| ||| ||||| |||||| ||  |  | |||||||||| || ||||||||||| ||||| |||||||||    
T  53877 aagtattttacatgcatataaattttagtataaataatttgttgacatatcttaaccgtatcgtatcct-aatttaaaaaaattt 53960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University