View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1084_low_79 (Length: 289)
Name: NF1084_low_79
Description: NF1084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1084_low_79 |
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Alignment Details
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 93 - 253
Target Start/End: Original strand, 11044929 - 11045089
Alignment:
| Q |
93 |
ttaagttgattttgatggtcatcctagataagaattaaaagctctaaaaatcgggaatagacctaaaccttgatggtcagggttcctaaacggtatatga |
192 |
Q |
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| T |
11044929 |
ttaagttgattttgatggtcatgctagataagaattaaaagctctaaaaatcaggaatagacctaaaccttgatggtcagggttcctaaatggtatatga |
11045028 |
T |
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| Q |
193 |
aacaaggccagctataggccttaaaaacgaactcaattaaacaggctagcttatcctatag |
253 |
Q |
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| T |
11045029 |
aacaaagccagccataggccttaaaaacaaactcaattaaacaggctagcttatcctatag |
11045089 |
T |
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