View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10851_low_16 (Length: 217)

Name: NF10851_low_16
Description: NF10851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10851_low_16
NF10851_low_16
[»] chr1 (14 HSPs)
chr1 (3-131)||(23953690-23953819)
chr1 (126-202)||(38595868-38595945)
chr1 (131-202)||(52702261-52702333)
chr1 (132-202)||(28726021-28726092)
chr1 (122-191)||(5694311-5694380)
chr1 (131-202)||(30664283-30664354)
chr1 (155-202)||(10679534-10679580)
chr1 (130-191)||(17333409-17333469)
chr1 (130-191)||(24178590-24178651)
chr1 (132-191)||(18043162-18043221)
chr1 (132-199)||(27457069-27457137)
chr1 (132-191)||(29657771-29657830)
chr1 (132-191)||(29210413-29210472)
chr1 (132-191)||(29683195-29683255)
[»] chr6 (9 HSPs)
chr6 (131-202)||(34712241-34712313)
chr6 (132-202)||(34706720-34706791)
chr6 (155-202)||(1127839-1127886)
chr6 (153-202)||(31379482-31379531)
chr6 (131-191)||(29978232-29978291)
chr6 (132-191)||(29451242-29451300)
chr6 (130-191)||(21878474-21878535)
chr6 (132-191)||(20897948-20898007)
chr6 (132-191)||(23402138-23402197)
[»] chr7 (13 HSPs)
chr7 (132-202)||(6097336-6097407)
chr7 (132-202)||(34557006-34557076)
chr7 (134-202)||(19434495-19434564)
chr7 (132-202)||(20402389-20402460)
chr7 (155-202)||(32805562-32805609)
chr7 (129-202)||(13106430-13106504)
chr7 (135-199)||(30924109-30924174)
chr7 (128-202)||(38128287-38128362)
chr7 (123-202)||(45842889-45842968)
chr7 (133-191)||(28587911-28587968)
chr7 (132-191)||(18485961-18486020)
chr7 (132-172)||(27456258-27456298)
chr7 (132-191)||(34606261-34606320)
[»] chr8 (21 HSPs)
chr8 (129-202)||(18955690-18955764)
chr8 (130-202)||(29566698-29566771)
chr8 (129-202)||(40267918-40267992)
chr8 (129-202)||(39751587-39751661)
chr8 (156-202)||(24261390-24261436)
chr8 (133-202)||(43714304-43714373)
chr8 (123-202)||(42655392-42655472)
chr8 (132-186)||(2490320-2490375)
chr8 (163-202)||(39206217-39206256)
chr8 (158-202)||(37479594-37479638)
chr8 (130-191)||(37373204-37373264)
chr8 (132-191)||(4537871-4537930)
chr8 (132-191)||(27988626-27988685)
chr8 (132-191)||(28045928-28045987)
chr8 (121-191)||(30675699-30675769)
chr8 (132-181)||(5725596-5725646)
chr8 (126-171)||(16394207-16394253)
chr8 (133-191)||(16888671-16888728)
chr8 (133-191)||(21595848-21595905)
chr8 (137-203)||(33899125-33899190)
chr8 (132-191)||(168466-168525)
[»] chr4 (14 HSPs)
chr4 (132-202)||(55594131-55594201)
chr4 (132-202)||(10110117-10110188)
chr4 (135-202)||(34151124-34151191)
chr4 (135-202)||(16572603-16572671)
chr4 (134-202)||(22225861-22225930)
chr4 (132-201)||(37402870-37402939)
chr4 (132-203)||(11893516-11893588)
chr4 (132-202)||(292114-292185)
chr4 (155-202)||(28120022-28120069)
chr4 (171-202)||(6493815-6493846)
chr4 (129-191)||(32217042-32217104)
chr4 (132-172)||(24679787-24679827)
chr4 (131-191)||(28755620-28755679)
chr4 (132-191)||(43944507-43944566)
[»] chr5 (16 HSPs)
chr5 (129-202)||(39234828-39234901)
chr5 (131-202)||(40608651-40608723)
chr5 (132-202)||(16972176-16972247)
chr5 (132-202)||(21944976-21945047)
chr5 (124-202)||(32188106-32188184)
chr5 (119-202)||(14214165-14214249)
chr5 (134-202)||(1383390-1383457)
chr5 (159-203)||(30889545-30889589)
chr5 (155-202)||(31467743-31467790)
chr5 (131-191)||(34650960-34651019)
chr5 (129-191)||(10069966-10070028)
chr5 (132-191)||(31909632-31909690)
chr5 (164-202)||(14349592-14349630)
chr5 (132-191)||(13661808-13661867)
chr5 (131-191)||(21547521-21547580)
chr5 (132-191)||(35132522-35132581)
[»] chr2 (13 HSPs)
chr2 (133-201)||(29771417-29771486)
chr2 (131-202)||(15135836-15135907)
chr2 (134-202)||(26269987-26270054)
chr2 (132-202)||(5282369-5282440)
chr2 (120-202)||(44854298-44854379)
chr2 (132-202)||(45261903-45261978)
chr2 (155-202)||(44854456-44854502)
chr2 (129-202)||(31782681-31782755)
chr2 (129-202)||(28012070-28012143)
chr2 (132-172)||(22887750-22887791)
chr2 (131-191)||(44587901-44587961)
chr2 (132-191)||(561645-561704)
chr2 (132-191)||(26891790-26891849)
[»] scaffold0001 (1 HSPs)
scaffold0001 (134-203)||(509104-509173)
[»] chr3 (11 HSPs)
chr3 (160-199)||(53163792-53163831)
chr3 (130-191)||(4168181-4168242)
chr3 (132-190)||(34300741-34300800)
chr3 (121-191)||(39074408-39074478)
chr3 (163-202)||(51665831-51665870)
chr3 (131-179)||(27994438-27994487)
chr3 (123-167)||(43786862-43786907)
chr3 (132-191)||(272220-272279)
chr3 (132-191)||(41304005-41304064)
chr3 (132-191)||(49893331-49893390)
chr3 (129-180)||(51819012-51819064)
[»] scaffold0264 (1 HSPs)
scaffold0264 (132-191)||(22961-23020)
[»] scaffold0045 (1 HSPs)
scaffold0045 (128-191)||(50544-50607)


Alignment Details
Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 23953819 - 23953690
Alignment:
Q  3 agtaatatggtaaagtcaagtcaattaaagattcgttttgtgtaaggaggaagcaaaattaatgtatttaattgatgagtag-aatattcaaactcatgt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23953819 agtaatatggtaaagtcaagtcaattgaagattcgttttgtgtaaggaggaagcaaaattaatgtatttaattgatgagtagaaatattcaaactcatgt 23953720  T
Q  102 aagatgttgagagagccaatattattatat 131  Q
    ||||||||||||||||||||||||||||||    
T  23953719 aagatgttgagagagccaatattattatat 23953690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 38595945 - 38595868
Alignment:
Q  126 ttatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38595945 ttatatgggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattg 38595868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 52702333 - 52702261
Alignment:
Q  131 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52702333 tgggaaatgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattg 52702261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 28726092 - 28726021
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  28726092 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattg 28726021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 5694311 - 5694380
Alignment:
Q  122 attattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  5694311 attattttatgggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaaagggaaattatat 5694380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 30664354 - 30664283
Alignment:
Q  131 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||| | ||||||||||||||||||||    
T  30664354 tgggaaatgctaaccg-tgcctccggggcattggttaaggataataaaaaagaaaattatatgttaattattg 30664283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 10679534 - 10679580
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10679534 gggcactggtta-ggataataaaaagggaaattatatgttaattattg 10679580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 17333469 - 17333409
Alignment:
Q  130 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||||| |||| ||||||||||||||||||| || |||| |||||||||||    
T  17333469 atgggaaatgctaaccggtgcccccgggcactggttaaggat-atgaaaaaggaaattatat 17333409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 24178651 - 24178590
Alignment:
Q  130 atgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||||||||| || ||||||||||||||||| || |||| |||||||||||    
T  24178651 atgggaaatgctaaccgatgcccccggggcactggttaaggat-atgaaaaaggaaattatat 24178590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 18043162 - 18043221
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||||||| |||||||||||    
T  18043162 gggaaatgctaaccggtgcctccggggcactggttaagggt-ataaaaaaggaaattatat 18043221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 27457137 - 27457069
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaatta 199  Q
    |||||||||||| || |||| ||||| ||  |||||| |||||||||||| ||||||||||||||||||    
T  27457137 gggaaatgctaatcggtgcccccggggcaagggttaaagataataaaaagtgaaattatatgttaatta 27457069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 29657771 - 29657830
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||||||| |||||||||||    
T  29657771 gggaaatgctaaccggtgcccccggggcactggttaaggat-ataaaaaaggaaattatat 29657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 29210413 - 29210472
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||    
T  29210413 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatat 29210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 29683195 - 29683255
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||| ||||  ||||| |||||||||||    
T  29683195 gggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatat 29683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 34712313 - 34712241
Alignment:
Q  131 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34712313 tgggaaatgctaaccggtgcctccggggcactggttaaggataataaaaagggaaattatatgttaattattg 34712241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 34706720 - 34706791
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||| | ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  34706720 gggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagggaaattatatgttaattattg 34706791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 1127839 - 1127886
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1127839 gggcaccggttaaggataataaaaagggaaattatatgttaattattg 1127886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 31379531 - 31379482
Alignment:
Q  153 ccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  31379531 ccgggtaccggttaaggataataaaaagggaaattatatattaattattg 31379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 29978232 - 29978291
Alignment:
Q  131 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| ||||||||| |||| ||||||||| || |||| |||||||||||    
T  29978232 tgggaaatgctaaccggtgcctccggacactagttaaggat-atgaaaaaggaaattatat 29978291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 29451300 - 29451242
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||| | ||||||||||||| |||||||||| || |||| |||||||||||    
T  29451300 gggaaatgctaactggtgcctccgggcaccggttaaggat-atgaaaaaggaaattatat 29451242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 21878535 - 21878474
Alignment:
Q  130 atgggaaatgctaaccgatgcct-ccgggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| || |||| |||||||||||    
T  21878535 atgggaaatgctaaccggtgcctcccgggcacgggttaaggat-atgaaaaaggaaattatat 21878474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 20897948 - 20898007
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| || ||||||||||||||||| || |||| |||||||||||    
T  20897948 gggaaatgctaaccggtgcccccagggcactggttaaggat-atgaaaaaggaaattatat 20898007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 23402138 - 23402197
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||| | |||||||||| |||||||||||||| || |||| |||||||||||    
T  23402138 gggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatat 23402197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 9e-26; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 6097336 - 6097407
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6097336 gggaaatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattg 6097407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 34557076 - 34557006
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||| | |||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34557076 gggaaatgctaactggtgccccggggcattggttaaggataataaaaagggaaattatatgttaattattg 34557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 19434495 - 19434564
Alignment:
Q  134 gaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19434495 gaaatgttaaccggtgcctccggggcactgattaaggataataaaaagggaaattatatgttaattattg 19434564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 20402389 - 20402460
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| || | ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  20402389 gggaaatgctaaccggtgtccccgggacattggttaaggataataaaaagggaaattatatgttaattattg 20402460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 32805562 - 32805609
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32805562 gggcactggttaaggataataaaaagggaaattatatgttaattattg 32805609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 13106504 - 13106430
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccgggcactggttaagga-taataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||| ||||  |||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  13106504 tatgggaaatgctaaccggtgccctcgggcactggttaaagaataataaaaagggaaattatttgttaattattg 13106430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 30924174 - 30924109
Alignment:
Q  135 aaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaatta 199  Q
    |||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  30924174 aaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaatta 30924109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 38128287 - 38128362
Alignment:
Q  128 atatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||| | ||| || |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  38128287 atatgggaaaggttaatcggtgcccccgggacaccggttaaggataataaaaaggaaaattatatgttaattattg 38128362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 45842968 - 45842889
Alignment:
Q  123 ttattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||  ||||||||||||||| |||    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  45842968 ttattattagggaaatgctaaccggtgctctggggcactggttagggataataaaaaagaaaattatatgttaattattg 45842889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 28587911 - 28587968
Alignment:
Q  133 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||| |||| |||| |||||||||||||| || |||| |||||||||||    
T  28587911 ggaaatgctaaccggtgcccccggacactggttaaggat-atgaaaaaggaaattatat 28587968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 18485961 - 18486020
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| ||||||||||||||| | |||| |||||||||||    
T  18485961 gggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaa-ggaaattatat 18486020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 27456298 - 27456258
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggata 172  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  27456298 gggaaatgctaactggtgcccccgggcactggttaaggata 27456258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 34606261 - 34606320
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||| | |||||||||| |||||||||||||| || |||| |||||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatat 34606320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 18955690 - 18955764
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  18955690 tatgggaaatgctaaccgatgcccccgtggcactggttaatgataataaaaagggaaattatatgttaattattg 18955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 29566698 - 29566771
Alignment:
Q  130 atgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  29566698 atgggaaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattattg 29566771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 40267918 - 40267992
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  40267918 tatgggaaatgctaaccaatgtccccggagcactggttaaggataataaaaagggaaattataggttaattattg 40267992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 39751661 - 39751587
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||    
T  39751661 tatgggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattg 39751587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 24261390 - 24261436
Alignment:
Q  156 ggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24261390 ggcactggttaaggataataaaaagagaaattatatgttaattattg 24261436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 43714373 - 43714304
Alignment:
Q  133 ggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||| |||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  43714373 ggaaacgctaaccggtgcccccggggcactggtta-ggataataaaaagggaaattatatgttaattattg 43714304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 42655472 - 42655392
Alignment:
Q  123 ttattatatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||| | ||||||||||||  | ||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||    
T  42655472 ttattaaaagggaaatgctaagtggtgcctccggagcacttgttaaggataatgaaaaggtaaattatatgttaattattg 42655392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 2490375 - 2490320
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaat 186  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  2490375 gggaaatgctaaccggtgcctccggggcacaggttaaggataataaaaagggaaat 2490320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 39206217 - 39206256
Alignment:
Q  163 gttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39206217 gttaaggataataaaaagggaaattatatgttaattattg 39206256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 37479594 - 37479638
Alignment:
Q  158 cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  37479594 cactgattaaggataataaaaaaggaaattatatgttaattattg 37479638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 37373204 - 37373264
Alignment:
Q  130 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||||| |||| |||| |||||||||||||| || |||| |||||||||||    
T  37373204 atgggaaatgctaaccggtgcccccggacactggttaaggat-atgaaaaaggaaattatat 37373264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 4537930 - 4537871
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||    
T  4537930 gggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaataggaaattatat 4537871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 27988685 - 27988626
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||    
T  27988685 gggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatat 27988626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 28045987 - 28045928
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||    
T  28045987 gggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatat 28045928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 30675769 - 30675699
Alignment:
Q  121 tattattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||| |||||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||    
T  30675769 tattattttatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatat 30675699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 5725646 - 5725596
Alignment:
Q  132 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagg 181  Q
    ||||||||||||||| ||||||||| | ||||||||| |||||||||||||    
T  5725646 gggaaatgctaaccggtgcctccggtgaactggttaaagataataaaaagg 5725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 16394253 - 16394207
Alignment:
Q  126 ttatatgggaaatgctaaccgatgcctcc-gggcactggttaaggat 171  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||    
T  16394253 ttatatgggaaatgctaaccggtgcccccggggcactggttaaggat 16394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 16888728 - 16888671
Alignment:
Q  133 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||| |||| |||||||| |||||||||| || |||| |||||||||||    
T  16888728 ggaaatgctaaccggtgcccccgggcacaggttaaggat-atgaaaaaggaaattatat 16888671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 21595848 - 21595905
Alignment:
Q  133 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||| |||| ||||||||||||||||| | || |||| |||||||||||    
T  21595848 ggaaatgctaaccggtgcccccgggcactggttaagggt-atgaaaaaggaaattatat 21595905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 33899190 - 33899125
Alignment:
Q  137 atgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattga 203  Q
    |||||||||| |||| | |||||||||||||| || ||||||| |||||||||||  ||||||||||    
T  33899190 atgctaaccggtgcc-cggggcactggttaagaatgataaaaaaggaaattatataataattattga 33899125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 168466 - 168525
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||    
T  168466 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatat 168525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 55594131 - 55594201
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  55594131 gggaaatgctaaccggtgcctcggggcactggttaaggataataaaaaggaaaattatatgttaattattg 55594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 10110188 - 10110117
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  10110188 gggaaatgctaaccggtgcctccgggacactgattaaggataataaaaagggaaattatatgttaattattg 10110117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 34151124 - 34151191
Alignment:
Q  135 aaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34151124 aaatgctaaccgatgccccggggcactggttaaggataataaaaaggaaaattatatgttaattattg 34151191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 16572671 - 16572603
Alignment:
Q  135 aaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  16572671 aaatgctaaccggtgcctccgaggcactggttaaggataataaaaagagaaattatatgttaattattg 16572603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 22225930 - 22225861
Alignment:
Q  134 gaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22225930 gaaatgctaaccggtgcccccgggacactggttaaggataataaaaagggaaactatatgttaattattg 22225861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 37402939 - 37402870
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattatt 201  Q
    ||||||||||||||| |||  |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  37402939 gggaaatgctaaccggtgctcccggacactggttacggataataaaaagggaaattatatgttaattatt 37402870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 11893588 - 11893516
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattga 203  Q
    ||||||||||||| | |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11893588 gggaaatgctaacaggtgcccccagggcactgtttaaggataataaaaagggaaattatatgttaattattga 11893516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 292114 - 292185
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||| | ||| ||| |||||||||||||||||||  ||||||||||||||||||||    
T  292114 gggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagaaaaattatatgttaattattg 292185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 28120069 - 28120022
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  28120069 gggcaccggttaaggataataaaaagagaaattatatgttaattattg 28120022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 6493846 - 6493815
Alignment:
Q  171 taataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||||||||||||    
T  6493846 taataaaaagggaaattatatgttaattattg 6493815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 32217042 - 32217104
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| | |||| ||||| |||||||||||||| ||||||| |||||||||||    
T  32217042 tatgggaaatgctaactggtgcccccggggcactggttaaggat-ataaaaaaggaaattatat 32217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 24679827 - 24679787
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggata 172  Q
    ||||||||||||||| || ||| ||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtctcggggcactggttaaggata 24679787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 28755620 - 28755679
Alignment:
Q  131 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| || | | ||||||||||||||||| || |||| |||||||||||    
T  28755620 tgggaaatgctaaccggtgtcccagggcactggttaaggat-atgaaaaaggaaattatat 28755679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 43944507 - 43944566
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||    
T  43944507 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatat 43944566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 39234828 - 39234901
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||| |||  | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  39234828 tatgggaaatgctaaccggtgctccggggcacgggttaaggataataaaaagggaaattatatgttaattattg 39234901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 40608723 - 40608651
Alignment:
Q  131 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40608723 tgggaaatgctaaccggtgctcccgggacactggttaaggataataaaaagggaaattatatgttaattattg 40608651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 16972176 - 16972247
Alignment:
Q  132 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  16972176 gggaaatgctaaccgatgcccccggagcactggttaaggataataaaaagaaaaattatatgttaattattg 16972247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 21945047 - 21944976
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  21945047 gggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatatattaattattg 21944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 32188184 - 32188106
Alignment:
Q  124 tattatatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||    
T  32188184 tattttatgggaaatgctaaccgatgcctccgaggcactggttaa-gataataaaaagaaaaattatatgttaattattg 32188106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 14214249 - 14214165
Alignment:
Q  119 aatattattatatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||| ||| |||||||| |||||| |||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  14214249 aatattataataagggaaatgttaaccggtgctcccgaggcacaggttaaggataataaaaagggaaattatatgttaattattg 14214165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 1383457 - 1383390
Alignment:
Q  134 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||| || | ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1383457 gaaatgctaaccggtgtc-ccgggtactggttaaggataataagaagggaaattatatgttaattattg 1383390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 30889589 - 30889545
Alignment:
Q  159 actggttaaggataataaaaagggaaattatatgttaattattga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30889589 actggttaaggataataaaaagggaaattatatgttaattattga 30889545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 31467743 - 31467790
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31467743 gggcaccggttaaggataataaaaagggaaattatatgttaattattg 31467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 34651019 - 34650960
Alignment:
Q  131 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| |||| ||||||||||||||||| | || |||| |||||||||||    
T  34651019 tgggaaatgctaaccggtgcccccgggcactggttaagggt-atgaaaaaggaaattatat 34650960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 10069966 - 10070028
Alignment:
Q  129 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||||| |||| || ||||||||||||||||| || |||| |||||||||||    
T  10069966 tatgggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatat 10070028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 31909632 - 31909690
Alignment:
Q  132 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||| |||||| |||||||||  ||||||||||||| || ||||||||||||||||    
T  31909632 gggaaatgttaaccggtgcctccggatactggttaaggat-attaaaagggaaattatat 31909690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 14349592 - 14349630
Alignment:
Q  164 ttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  14349592 ttaaggataataaaaagataaattatatgttaattattg 14349630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 13661808 - 13661867
Alignment:
Q  132 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| |||| ||||||||||||||| || |||| |||||||||||    
T  13661808 gggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatat 13661867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 21547580 - 21547521
Alignment:
Q  131 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| || | |||||||  |||||||||| ||||||| |||||||||||    
T  21547580 tgggaaatgctaaccggtgtccccgggcatcggttaaggat-ataaaaaaggaaattatat 21547521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 35132522 - 35132581
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||    
T  35132522 gggaaatgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatat 35132581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 29771417 - 29771486
Alignment:
Q  133 ggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattatt 201  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattatt 29771486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 15135907 - 15135836
Alignment:
Q  131 tgggaaatgctaaccgatgcctccgggc-actggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  15135907 tgggaaatgctaaccaatgcctccggggtactg-ttaaggataataaaaagggaaattatatgttaattattg 15135836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 26269987 - 26270054
Alignment:
Q  134 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26269987 gaaatgctaaccggtgcccccgggcactggtta-ggataataaaaagagaaattatatgttaattattg 26270054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 5282440 - 5282369
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  5282440 gggaaatactaatcgatgcctccgggacactgattaaggataataaaaggggaaattatatgttaattattg 5282369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 44854298 - 44854379
Alignment:
Q  120 atattattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||| | |||||||||||||||| |||| |||||  |||||||||||||||||||| ||||||||||| ||||||||||    
T  44854298 atattattttttgggaaatgctaaccggtgcccccgggtcctggttaaggataataaaaa-ggaaattatatattaattattg 44854379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 45261903 - 45261978
Alignment:
Q  132 gggaaatgctaaccgatgcctcc--gggcactggttaaggataataaaaagggaa---attatatgttaattattg 202  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  45261903 gggaaatgctaaccggtgccccccagggcactggttaaggataataaaaagggaaattattatatgttaattattg 45261978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 44854502 - 44854456
Alignment:
Q  155 gggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44854502 gggcactggttaaggataataaaaa-ggaaattatatgttaattattg 44854456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 31782755 - 31782681
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||| |||||||||||| || | ||||| ||| | ||||||||||||||||| |||||||||| ||||||||||    
T  31782755 tatggaaaatgctaaccggtgtccccggggcacggattaaggataataaaaagagaaattatatattaattattg 31782681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 28012143 - 28012070
Alignment:
Q  129 tatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattg 202  Q
    ||||||||||| |||||| |||| | ||  |||||||||||||| |||||||| |||||||||  |||||||||    
T  28012143 tatgggaaatgataaccggtgccccgggatactggttaaggatattaaaaaggaaaattatatagtaattattg 28012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 22887750 - 22887791
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggata 172  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  22887750 gggaaatgctaaccgatgcctccggggcagtggttaaggata 22887791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 44587901 - 44587961
Alignment:
Q  131 tgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||||||| |||| || |||||| |||||||||| ||||||| |||||||||||    
T  44587901 tgggaaatgctaaccggtgcccccggggcaccggttaaggat-ataaaaaaggaaattatat 44587961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 561704 - 561645
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||    
T  561704 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatat 561645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 26891849 - 26891790
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| ||||| |||||||| ||||||| |||||||||||    
T  26891849 gggaaatgctaaccggtgcccccgggacactgattaaggat-ataaaaaaggaaattatat 26891790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 509173 - 509104
Alignment:
Q  134 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattga 203  Q
    ||||||||||||| |||| ||||  | | ||||||||||||||||| |||||||||||||||||||||||    
T  509173 gaaatgctaaccggtgcccccggatattagttaaggataataaaaatggaaattatatgttaattattga 509104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 53163792 - 53163831
Alignment:
Q  160 ctggttaaggataataaaaagggaaattatatgttaatta 199  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  53163792 ctggttaaggataataaatagggaaattatatgttaatta 53163831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 4168181 - 4168242
Alignment:
Q  130 atgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| |||||||||||    
T  4168181 atgggaaatgctaaccggtgcctccggggaactggttaaggat-ataaaaaaggaaattatat 4168242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 34300800 - 34300741
Alignment:
Q  132 gggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattata 190  Q
    |||||||| ||||||||| ||||  ||||||||||||||||||||||||  |||||||||    
T  34300800 gggaaatgttaaccgatgtctccaaggcactggttaaggataataaaaaatgaaattata 34300741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 39074408 - 39074478
Alignment:
Q  121 tattattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||| ||||||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||    
T  39074408 tattataatatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatat 39074478  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 51665870 - 51665831
Alignment:
Q  163 gttaaggataataaaaagggaaattatatgttaattattg 202  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  51665870 gttaaggataataaaaagagaaattatatattaattattg 51665831  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 27994487 - 27994438
Alignment:
Q  131 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaa 179  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  27994487 tgggaaatgttaaccgatgcccccggggcactggttaaggatactaaaaa 27994438  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 43786862 - 43786907
Alignment:
Q  123 ttattatatgggaaatgctaaccgatgcctcc-gggcactggttaa 167  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||    
T  43786862 ttattttatgggaaatgctaaccggtgcctccggggcactggttaa 43786907  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 272220 - 272279
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||    
T  272220 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatat 272279  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 41304005 - 41304064
Alignment:
Q  132 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| ||||||| ||||| ||||||||||| || |||| |||||||||||    
T  41304005 gggaaatgctaaccggtgcctccggggcagtggttaaggat-atgaaaaaggaaattatat 41304064  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 49893331 - 49893390
Alignment:
Q  132 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||    
T  49893331 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatat 49893390  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 51819064 - 51819012
Alignment:
Q  129 tatgggaaatgctaaccgatgcctc-cgggcactggttaaggataataaaaag 180  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||| |||||||    
T  51819064 tatgggaaatgctaactgatgcctctggggcactgattaaggatactaaaaag 51819012  T

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Target: scaffold0264 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 22961 - 23020
Alignment:
Q  132 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatat 191  Q
    ||||||||||||||| |||| |||| ||||||||||||||| || |||| |||||||||||    
T  22961 gggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatat 23020  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 50544 - 50607
Alignment:
Q  128 atatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 191  Q
    |||||||||||| |||||| ||||||| ||||||||||||| ||| || |||| |||||||||||    
T  50544 atatgggaaatgttaaccggtgcctccggggcactggttaaagat-atgaaaaaggaaattatat 50607  T

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