View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10853_1 (Length: 780)
Name: NF10853_1
Description: NF10853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10853_1 |
 | |
|
| [»] scaffold0692 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 40)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 255 - 615
Target Start/End: Complemental strand, 10605571 - 10605211
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
|||||||| |||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
10605571 |
taagctctttagtaacatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctac |
10605472 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
|||||| |||||||| | ||| ||| |||||||||||||||||||||||||| || ||| || ||||||||||| ||||| ||||||||||||| |
|
|
| T |
10605471 |
ccttggaataagattcgtatggtttccattttctattgctacttctacatctcttgttacaaggtgtgggtccaaaatctctttaatattatcaggaaat |
10605372 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||| ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10605371 |
gaagttgcaacaaagttatgcagattttgaccatcttgaaaaacttcatcagtgggtctcctaccagtaagtatttccaacatcaggattccaaagctat |
10605272 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaag |
615 |
Q |
| |
|
||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
10605271 |
acatgtcaccacatatagacacttcagaacccattccatactctgaaacatgtagaaaaag |
10605211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 239 - 615
Target Start/End: Original strand, 10746406 - 10746773
Alignment:
| Q |
239 |
gcctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaa |
338 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10746406 |
gcctttctgattatgttgagctctctagtgacatccacagtattcattctttcttttggtgattcaattgtacaaataagtccaatcctaaaaagtgaaa |
10746505 |
T |
|
| Q |
339 |
ctaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtttt |
438 |
Q |
| |
|
|||| ||||| | |||| ||||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||| | ||||||| || || | |
|
|
| T |
10746506 |
ctaaacactcttttacagttggaataagattctcattgtttccatcttctactgc---------atctcttgatagaagatgcgggtccaagatatttat |
10746596 |
T |
|
| Q |
439 |
aagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacata |
538 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||||||| |||| |
|
|
| T |
10746597 |
aagattatcaggaaacgatattgcaacaaagttatgcagattttgaccatcttcaaaaacttcatcagtgggtcttctaccagtaagcatttccagcata |
10746696 |
T |
|
| Q |
539 |
aggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaag |
615 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
10746697 |
aggattccaaagctatacatatcaccatatgtggacacttcagaacccattccatactctaaaacatgtagcaaaag |
10746773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 239 - 608
Target Start/End: Complemental strand, 10581830 - 10581461
Alignment:
| Q |
239 |
gcctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaa |
338 |
Q |
| |
|
|||||||||||||| ||||||||| || |||||| ||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10581830 |
gcctttctgattatactaagctctatacatacatcctcaatattcagtctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaa |
10581731 |
T |
|
| Q |
339 |
ctaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtttt |
438 |
Q |
| |
|
|||||||||||| | || |||| ||||||||||| |||| ||||||| ||| |||||||| | || ||||||| |||| || |||||||||| | || |
|
|
| T |
10581730 |
ctaagcactcctttgcagctggaataagattctcaagatttccatcttccatttctacttctgcgtcccttgataaaagatgtgggtccaaaattttctt |
10581631 |
T |
|
| Q |
439 |
aagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacata |
538 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | || || |||||||||||||||||| |||||||||||| |
|
|
| T |
10581630 |
aagattagcaggaaatgatattgcaacaaagttatgcagattttgaccatcttcaaaagcgtgatcagtgggtcttctaccggtaagcatttccaacata |
10581531 |
T |
|
| Q |
539 |
aggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
||||||||||||||||||||||||||||| | || |||||| ||||||| |||||||||||| |||||| |
|
|
| T |
10581530 |
aggattccaaagctatacatgtcaccacatgcagatacttcagaacccatcccatactctaaagcatgta |
10581461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 239 - 617
Target Start/End: Complemental strand, 10565838 - 10565460
Alignment:
| Q |
239 |
gcctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaa |
338 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| || |||| || ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10565838 |
gcctttctgattatactaagctctctacatacaacctcaatgttgattctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaa |
10565739 |
T |
|
| Q |
339 |
ctaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtttt |
438 |
Q |
| |
|
|||||||||||| | || |||| ||||||||||| |||| |||||| ||| | |||||| |||| |||||| |||| || ||||||||||| | || |
|
|
| T |
10565738 |
ctaagcactcctttgcaggtggaataagattctcatgatttccatctttcatttcaacttctgcatccattgataaaagatgtgggtccaaaatcttctt |
10565639 |
T |
|
| Q |
439 |
aagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacata |
538 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | || || |||||||||||||||||| |||||||||||| |
|
|
| T |
10565638 |
aagattaccaggaaatgatattgcaacaaagttatgcagattttgaccatcttcaaaagcgtgatcagtgggtcttctaccggtaagcatttccaacata |
10565539 |
T |
|
| Q |
539 |
aggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaagtt |
617 |
Q |
| |
|
| |||||||||||||||||| |||||||| ||||| |||||| |||||| ||||||||||||||||||| ||||||| |
|
|
| T |
10565538 |
aagattccaaagctatacatatcaccacatgtggatacttcagcacccatcccatactctaaaacatgtaacaaaagtt |
10565460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 255 - 615
Target Start/End: Complemental strand, 10612529 - 10612169
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10612529 |
taagttctctagtaacatccacaatattcattctttctttgggtgattccattgaacaaagaagtccaatcctaaaaagtgaaactaagcactcctttaa |
10612430 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
||||||| |||||||||||| ||| |||||| |||| |||||||| ||| | |||| | |||| || ||||||| ||| || |||||||| ||||||| |
|
|
| T |
10612429 |
acttggaataagattctcactctttccatcttgtatttctacttctgcatattttgacacaagatgtgggtccaagatctttataagattagcaggaaac |
10612330 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||| | |||| || |||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10612329 |
agtgttgcaacaaagttatgtagattttgatcatcttcaaatgcctcatcagtgggtcttctaccggtaagcatttccaacataaggattccaaagctat |
10612230 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaag |
615 |
Q |
| |
|
|||| |||||||| ||||| |||||| |||||| |||||||||||||||||||| ||||| |
|
|
| T |
10612229 |
acatatcaccacatgtggatacttcagcacccatcccatactctaaaacatgtagcaaaag |
10612169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 239 - 620
Target Start/End: Original strand, 10739800 - 10740181
Alignment:
| Q |
239 |
gcctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaa |
338 |
Q |
| |
|
||||||| |||| || |||||||| | | ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
10739800 |
gcctttcggattgtgttaagctcttgattaacatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaa |
10739899 |
T |
|
| Q |
339 |
ctaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtttt |
438 |
Q |
| |
|
||||| | |||||||| | ||| ||| || | | ||| |||||| ||||| ||||||||||||||||| | |||| || ||||||||||| | | |
|
|
| T |
10739900 |
ctaaggattcctctaccccaggaactagaatcgctcggtttccatcttgtattgttacttctacatctcttgcttcaagatgtgggtccaaaatctctat |
10739999 |
T |
|
| Q |
439 |
aagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacata |
538 |
Q |
| |
|
|| ||| ||||||| ||| |||| ||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||||| |
|
|
| T |
10740000 |
aatgttaccaggaaacgaagttgctacaaagttatgtagattttgaccatcttgaaaaacttcatcagtgggtcttctaccggtaagtatttccaacata |
10740099 |
T |
|
| Q |
539 |
aggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaagttgtt |
620 |
Q |
| |
|
||||||||||||||||||||||||||| | || ||||||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
10740100 |
aggattccaaagctatacatgtcaccagatgttgacacttcagaacccattccatactctaaaacatgcagcaaaagttgtt |
10740181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 241 - 615
Target Start/End: Original strand, 10716365 - 10716727
Alignment:
| Q |
241 |
ctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaact |
340 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||| ||||| |||||| |
|
|
| T |
10716365 |
ctttctgattatgttgagctctctagtgacatccataatattcattctttctatcggtgattccattgtacaaacaagtccaatcctgaaaagagaaact |
10716464 |
T |
|
| Q |
341 |
aagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaa |
440 |
Q |
| |
|
||||| || | ||| ||| |||||||||| | |||| || ||||| |||||||||||| |||| || | ||||||||| || ||| |
|
|
| T |
10716465 |
aagcattcatttaccgcaggaataagattctc-------tatgcttccat-----cttctgcatctcttgatacaagatgtggatccaaaatctttataa |
10716552 |
T |
|
| Q |
441 |
gattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataag |
540 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||| |
|
|
| T |
10716553 |
gattgtcaggaaatgaagatgcaacaaagttatgcagattttgaccatcttgaaaaaattcatcagtgggtcttctaccggtaagcatttccaacataag |
10716652 |
T |
|
| Q |
541 |
gattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaag |
615 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10716653 |
gattccaaagctatacatgtcaccacatgtggacacttcagaacccattccatactctgaaacatgtagcaaaag |
10716727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 255 - 608
Target Start/End: Original strand, 10762231 - 10762584
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
10762231 |
taagctcttgagtaacatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctac |
10762330 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
| || | ||||| || | | ||| |||||| | ||| ||||||||||||||||| | |||| || |||||||||| | ||| ||| |||||||| |
|
|
| T |
10762331 |
ccctgcaataagaatcgctcggtttccatcttgttttgttacttctacatctcttgcttcaagatgtgggtccaaaatatctataatgttaccaggaaat |
10762430 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
10762431 |
gaagctgctacaaagttatgcagattttgaccatcttgaaaaacttcatcagtgggtcttctaccagtaagtattttcaacataaggactccaaagctat |
10762530 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
||||||||||| | || ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10762531 |
acatgtcaccagatgttgacacttcagaacccattccatactctaaaacatgta |
10762584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 11048013 - 11048244
Alignment:
| Q |
8 |
acatcatcacacataatttaatgttgcaaaccaaattcattgaacacactcatacacgcttccagctagacacttcttctcccacaaatgaccttataaa |
107 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048013 |
acataatcacacataatttaatcttgcaaaccaaattcattgaacacactcatacacgcttccagctagacacttcttctcccacaaatgaccttataaa |
11048112 |
T |
|
| Q |
108 |
tttagt----------------gtgaacacctgaaattcaaatcaagaggaagctcgttattgcctttgtattttgtaggttaggaattttgatatgcaa |
191 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11048113 |
tttagttcaattacttatgagtgtgaacacctgaaattcaaatcaagaggaagcttgttattgcctttgtattttgtaggttagaaattttgatatgcaa |
11048212 |
T |
|
| Q |
192 |
tcaattaatgaggagaaaaagtgtcaagtatc |
223 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |
|
|
| T |
11048213 |
tcaattaatgaggagaaaaagtgttaagtatc |
11048244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 444 - 621
Target Start/End: Original strand, 11048241 - 11048418
Alignment:
| Q |
444 |
tatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggat |
543 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11048241 |
tatcaggaagtgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcatgggtgggtcttctaccggtaagcatttccaacataaggat |
11048340 |
T |
|
| Q |
544 |
tccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgtagaaaaagttgttg |
621 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048341 |
tccaaagctatacatgtcaccacacgtggacacttcagaacccattccatactctaaaacatgtagaaaaagttgttg |
11048418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 625 - 774
Target Start/End: Original strand, 11048548 - 11048697
Alignment:
| Q |
625 |
caattgtactagtattgccatcggtggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgc |
724 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048548 |
caattgtactagtattgccatcggtggctgagacaagttttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttgg |
11048647 |
T |
|
| Q |
725 |
ctttagatcacaatgaataatcaattgctcacattcttgatgcagataat |
774 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048648 |
ctttagatcacaatgaataatcaattgctcacattcttgatgcagataat |
11048697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 281 - 602
Target Start/End: Original strand, 10651619 - 10651940
Alignment:
| Q |
281 |
ttcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctacacttggattaagattctcacaatttt |
380 |
Q |
| |
|
|||||||||||||||||||||| || || |||| |||||||||||| |||||||||||||| |||| ||||||| ||||| | | ||| |||| ||| |
|
|
| T |
10651619 |
ttcattctttcttttggtgatttcactgaacaagcaagtccaatcctgaaaagtgaaactaaacacttctctacagttggagtgaaatttccacagtttc |
10651718 |
T |
|
| Q |
381 |
catcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaatgaaattgcaacaaagttatgcagatt |
480 |
Q |
| |
|
| ||||||||| || ||||| ||| ||||| || |||| || | ||||||||| | ||| ||||| ||||||||||||| ||||||| |||||| ||| |
|
|
| T |
10651719 |
cttcttctatttcttcttcttcatttcttggtacaagatgtggatccaaaatctgtataatattattaggaaatgaaattccaacaaacatatgcaaatt |
10651818 |
T |
|
| Q |
481 |
ttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctatacatgtcaccacacgtggacacttca |
580 |
Q |
| |
|
|||||| |||||||| | | ||| | |||||||| |||||||| |||||||||||||| | || |||||||||||||||||| | ||||| | |||| |
|
|
| T |
10651819 |
ttgaccttcttcaaacattccatctgttggtcttcttccggtaagcatttccaacataagcaccccgaagctatacatgtcaccatatgtggatatttca |
10651918 |
T |
|
| Q |
581 |
aaacccattccatactctaaaa |
602 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10651919 |
gaacccattccatactctaaaa |
10651940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 246 - 599
Target Start/End: Complemental strand, 7193834 - 7193481
Alignment:
| Q |
246 |
tgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagca |
345 |
Q |
| |
|
|||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| ||| |
|
|
| T |
7193834 |
tgattatgcttaagtctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgca |
7193735 |
T |
|
| Q |
346 |
ctcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagatta |
445 |
Q |
| |
|
|| ||||||| ||||| | | ||| ||| ||| |||||||||||| | |||||| || ||||| || |||| | |||||||||| | |||||||| |
|
|
| T |
7193734 |
cttctctacatttggagtgaaatttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagatta |
7193635 |
T |
|
| Q |
446 |
tcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattc |
545 |
Q |
| |
|
| ||| || |||||| ||||||| || | ||||||||||||| ||||| | ||||| | ||||| || ||||||||||||||||||| ||| || | |
|
|
| T |
7193634 |
ttaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcc |
7193535 |
T |
|
| Q |
546 |
caaagctatacatgtcaccacacgtggacacttcaaaacccattccatactcta |
599 |
Q |
| |
|
| ||||||||||| |||||| | || || |||||| ||||||||||||| |||| |
|
|
| T |
7193534 |
cgaagctatacatatcaccatatgtagatacttcagaacccattccatattcta |
7193481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 237 - 602
Target Start/End: Original strand, 10659458 - 10659823
Alignment:
| Q |
237 |
atgcctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtga |
336 |
Q |
| |
|
|||||||| |||||||||| | |||||| |||||||| || ||||||||||||||||||||||||| || || ||| ||||||||||| ||||||||| |
|
|
| T |
10659458 |
atgcctttttgattatgcttaactctctggtgacatcaactatattcattctttcttttggtgatttcactgaacatgcaagtccaatccgaaaaagtga |
10659557 |
T |
|
| Q |
337 |
aactaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtt |
436 |
Q |
| |
|
||||||||||| |||||| ||||| | ||| ||| ||| | ||||||||| ||||| ||| ||||| || |||| || ||||||||||| | |
|
|
| T |
10659558 |
aactaagcacttctctacgattggagggaaatttccactctttccttcttctattttggcttcttcatttcttggtacaagatgtgggtccaaaatctgt |
10659657 |
T |
|
| Q |
437 |
ttaagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaaca |
536 |
Q |
| |
|
|| ||||| |||||||||||| ||||||| |||||||||||||||| |||||||| | ||||| | |||||||| |||||||| |||||||||| |
|
|
| T |
10659658 |
aaaatattatttggaaatgaaatttcaacaaatatatgcagattttgaccctcttcaaacatttcatccgttggtcttcttccggtaagcatttccaaca |
10659757 |
T |
|
| Q |
537 |
taaggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaa |
602 |
Q |
| |
|
||| | || |||||||||||||||||| ||||| | ||| ||||||||||||||||||||| |
|
|
| T |
10659758 |
gaagcaccccgaagctatacatgtcaccatgtgtggatatctcagaacccattccatactctaaaa |
10659823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 257 - 605
Target Start/End: Original strand, 9835721 - 9836069
Alignment:
| Q |
257 |
agctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctacac |
356 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||| | || |||| |
|
|
| T |
9835721 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaactgaaactaagcaattctttacag |
9835820 |
T |
|
| Q |
357 |
ttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaatga |
456 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||| ||||| ||||||||| || || | || ||||||||||| | ||||||| ||| ||||| |
|
|
| T |
9835821 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggtccaaaatctgtgaaagattaccagctaatga |
9835920 |
T |
|
| Q |
457 |
aattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctatac |
556 |
Q |
| |
|
| || || |||| || | |||||||||||||| ||||| ||||| | |||||||| || |||| |||||||||| || || |||||||||||| |
|
|
| T |
9835921 |
actttcagcaaacgtacgtagattttgaccatcctcaaatctttcatctgtaggtcttcttccagtaatcatttccaacacgagcatcccaaagctatac |
9836020 |
T |
|
| Q |
557 |
atgtcaccacacgtggacacttcaaaacccattccatactctaaaacat |
605 |
Q |
| |
|
||||||||| | || || ||||| |||||||||||||||||||||||| |
|
|
| T |
9836021 |
atgtcaccatatgttgatgcttcagaacccattccatactctaaaacat |
9836069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 653 - 774
Target Start/End: Original strand, 10216668 - 10216789
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||| | |||| |||||||||||||||||| ||||||||||||| || || ||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
10216668 |
tgagacaaatgttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatcacaatgaataatcaattgc |
10216767 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
10216768 |
tcacattcttgatgcagataat |
10216789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 257 - 565
Target Start/End: Original strand, 9827352 - 9827660
Alignment:
| Q |
257 |
agctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctacac |
356 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||| | || |||| |
|
|
| T |
9827352 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaactgaaactaagcaattctttacag |
9827451 |
T |
|
| Q |
357 |
ttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaatga |
456 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||| ||||| ||||||||| || || | || ||| ||||||| | ||||||||||| ||||| |
|
|
| T |
9827452 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggttcaaaatctgtgaaagattatcagctaatga |
9827551 |
T |
|
| Q |
457 |
aattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctatac |
556 |
Q |
| |
|
| || || |||| || | |||||||||||||| ||||| ||||| | |||||||| || |||| |||||||||| || || |||||||||||| |
|
|
| T |
9827552 |
actttcagcaaacgtacgtagattttgaccatcctcaaatctttcatctgtaggtcttcttccagtaatcatttccaacacgagcatcccaaagctatac |
9827651 |
T |
|
| Q |
557 |
atgtcacca |
565 |
Q |
| |
|
||||||||| |
|
|
| T |
9827652 |
atgtcacca |
9827660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 282 - 599
Target Start/End: Original strand, 10587895 - 10588194
Alignment:
| Q |
282 |
tcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctacacttggattaagattctcacaattttc |
381 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||||||| ||| | |||| ||||||||||| || | | |
|
|
| T |
10587895 |
tcattctttcttttggtgattccattgaacaagcaagtccaatccttagaagtgaaactaagcacttctccttagctggaataagattctcattatgtcc |
10587994 |
T |
|
| Q |
382 |
atcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaatgaaattgcaacaaagttatgcagattt |
481 |
Q |
| |
|
||||||||||| || |||| || ||||||||||| | |||||||||| |||||||| || ||||||| |||| |||||| |
|
|
| T |
10587995 |
atcttctattgaaac------------------aagatgtgggtccaaaatctgtataagattatcttgaaatgaactttcaacaaacatatgtagattt |
10588076 |
T |
|
| Q |
482 |
tgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctatacatgtcaccacacgtggacacttcaa |
581 |
Q |
| |
|
|||||||||||||| | ||||| | ||||||||| ||||| | |||||||||||||| || ||||||||||||||||||||| | ||||| |||||| |
|
|
| T |
10588077 |
tgaccatcttcaaacatttcatctgtgggtcttcttccggtgatcatttccaacataagcatcccaaagctatacatgtcaccagatgtggatacttcag |
10588176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 625 - 774
Target Start/End: Original strand, 10746906 - 10747055
Alignment:
| Q |
625 |
caattgtactagtattgccatcggtggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgc |
724 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||| || | |||||| ||||| |||| |
|
|
| T |
10746906 |
caattgtactagtattgccactagtggctgagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttgg |
10747005 |
T |
|
| Q |
725 |
ctttagatcacaatgaataatcaattgctcacattcttgatgcagataat |
774 |
Q |
| |
|
||| |||||||| ||||| | ||||||||||||||||| || ||||||| |
|
|
| T |
10747006 |
cttgagatcacagtgaatgactaattgctcacattcttggtgaagataat |
10747055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 649 - 766
Target Start/End: Original strand, 10652117 - 10652234
Alignment:
| Q |
649 |
tggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaa |
748 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||| |||||||||||||||| | |||||| |||||||||| |||||||||||||||||| | | |
|
|
| T |
10652117 |
tggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgc |
10652216 |
T |
|
| Q |
749 |
ttgctcacattcttgatg |
766 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
10652217 |
ttgctcacattcatgatg |
10652234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 649 - 766
Target Start/End: Original strand, 10660000 - 10660117
Alignment:
| Q |
649 |
tggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaa |
748 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| |||||||||| |||||||||||||||||| | | |
|
|
| T |
10660000 |
tggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattacttggctttagatcacaatgaatgaccgc |
10660099 |
T |
|
| Q |
749 |
ttgctcacattcttgatg |
766 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
10660100 |
ttgctcacattcgtgatg |
10660117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 652 - 760
Target Start/End: Complemental strand, 7193296 - 7193188
Alignment:
| Q |
652 |
ctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattg |
751 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| ||||| |||| |||||||||||||||||| ||| |||| |
|
|
| T |
7193296 |
ctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttagatcacaatgaatgatcgattg |
7193197 |
T |
|
| Q |
752 |
ctcacattc |
760 |
Q |
| |
|
||||||||| |
|
|
| T |
7193196 |
ctcacattc |
7193188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 649 - 774
Target Start/End: Original strand, 10740614 - 10740739
Alignment:
| Q |
649 |
tggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaa |
748 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| ||||||||||||||||| | ||| |
|
|
| T |
10740614 |
tggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaa |
10740713 |
T |
|
| Q |
749 |
ttgctcacattcttgatgcagataat |
774 |
Q |
| |
|
||| ||||||||||| || ||||||| |
|
|
| T |
10740714 |
ttgttcacattcttggtgaagataat |
10740739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 240 - 602
Target Start/End: Complemental strand, 10559732 - 10559370
Alignment:
| Q |
240 |
cctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaac |
339 |
Q |
| |
|
|||||||||| ||| | || |||||||||||||||| ||||||||||||| | |||| ||||||| | ||| ||||||||||||||| |||||||| |
|
|
| T |
10559732 |
cctttctgatcatgtttagttctctagtgacatccaatatattcattctttgtgttggcgattccaccgaacatgcaagtccaatcctaaagagtgaaac |
10559633 |
T |
|
| Q |
340 |
taagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgtttta |
439 |
Q |
| |
|
|||| | | | || || | ||||||||| || ||||||||||||| |||| | ||||||| || || | || ||||||||||| || |
|
|
| T |
10559632 |
taaggatttatgtattaatgaaataagattcttcttgcttctatcttctattgctgcttcctcttctcttggtacaatatgtgggtccaaaatctgcata |
10559533 |
T |
|
| Q |
440 |
agattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataa |
539 |
Q |
| |
|
| ||||| |||||||||| || ||||| | ||||||||||||||||||| ||| | ||||| || |||||||| || |||| |||||||| |||| |
|
|
| T |
10559532 |
acattattaggaaatgaattttcaacatacaaatgcagattttgaccatctaaaaacatttcatcagttggtcttcttcctgtaatcatttccaatataa |
10559433 |
T |
|
| Q |
540 |
ggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaa |
602 |
Q |
| |
|
| || ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
10559432 |
gcatcccaaagctatacatgtcaccatgtgtggaaacttcagaacccattccatactctaaaa |
10559370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 654 - 774
Target Start/End: Original strand, 10716860 - 10716980
Alignment:
| Q |
654 |
gagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgct |
753 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||| ||||||||||||| || | |||||| ||||| |||| ||| |||||||||||||| || ||||| | |
|
|
| T |
10716860 |
gagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgtt |
10716959 |
T |
|
| Q |
754 |
cacattcttgatgcagataat |
774 |
Q |
| |
|
|||||||||| || ||||||| |
|
|
| T |
10716960 |
cacattcttggtgaagataat |
10716980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 654 - 774
Target Start/End: Complemental strand, 10605041 - 10604921
Alignment:
| Q |
654 |
gagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgct |
753 |
Q |
| |
|
||||| ||| |||| |||||||||||||||||| |||||||||| || || | ||| || ||||| |||| |||||||||||||||||| | ||||||| |
|
|
| T |
10605041 |
gagaccagtcttgctatgccaaaatcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgct |
10604942 |
T |
|
| Q |
754 |
cacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
10604941 |
cacattcttgatgaagataat |
10604921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 651 - 774
Target Start/End: Complemental strand, 10565319 - 10565196
Alignment:
| Q |
651 |
gctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaatt |
750 |
Q |
| |
|
|||||||| ||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| | ||| |||| |||||||||||||||||| | ||||| |
|
|
| T |
10565319 |
gctgagacgagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatgaatgaccaatt |
10565220 |
T |
|
| Q |
751 |
gctcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| ||| ||||||| |
|
|
| T |
10565219 |
cttcacattctctatgaagataat |
10565196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 652 - 774
Target Start/End: Original strand, 10588348 - 10588470
Alignment:
| Q |
652 |
ctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattg |
751 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||| ||||||||||||| |||| |||||| || || |||| ||||| ||||||||||| | || || |
|
|
| T |
10588348 |
ctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctg |
10588447 |
T |
|
| Q |
752 |
ctcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| ||||| ||||||| |
|
|
| T |
10588448 |
ctcacattcatgatgaagataat |
10588470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 672 - 774
Target Start/End: Original strand, 10763071 - 10763173
Alignment:
| Q |
672 |
ccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgctcacattcttgatgcagat |
771 |
Q |
| |
|
||||||||||||||| ||||||||||||| || | |||||| ||||| |||| ||||||||||||||||| | |||||||||||||||| |||| |||| |
|
|
| T |
10763071 |
ccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagat |
10763170 |
T |
|
| Q |
772 |
aat |
774 |
Q |
| |
|
||| |
|
|
| T |
10763171 |
aat |
10763173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 19605243 - 19605604
Alignment:
| Q |
241 |
ctttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaact |
340 |
Q |
| |
|
||||||||||||| | |||||||||||| |||| | ||||||||||||||||| || |||||||| | ||| ||||||||||||||||| ||||| |
|
|
| T |
19605243 |
ctttctgattatgtttagctctctagtggcatcttctatattcattctttctttgggagattccatcgaacaggcaagtccaatcctaaaaatggaaaca |
19605342 |
T |
|
| Q |
341 |
aagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaa |
440 |
Q |
| |
|
||||| | || | ||| | |||||| | | || |||| ||||||| | ||||| || |||||| || || || ||||||||||| | ||| |
|
|
| T |
19605343 |
aagcatttatccatcgttgaaataagatgccgattgcttccatcatctattgttgcttcttcaactcttggtacaatacacgggtccaaaatcttcataa |
19605442 |
T |
|
| Q |
441 |
gattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataag |
540 |
Q |
| |
|
|||||||||||||||||| ||||| | | ||||||||||||||||| ||| | |||| | |||||||| || ||||| |||||||| ||||| |
|
|
| T |
19605443 |
tgttatcaggaaatgaaatttcaacatacaaacgcagattttgaccatctgtaaacatgtcatccgtcggtcttcttcccgtaagcatttccaatataag |
19605542 |
T |
|
| Q |
541 |
gattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaa |
602 |
Q |
| |
|
|| |||||||||||||| |||||| ||||| |||||| ||| ||||||||||||||||| |
|
|
| T |
19605543 |
catcccaaagctatacatatcaccatgtgtggaaacttcagaactcattccatactctaaaa |
19605604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 653 - 774
Target Start/End: Complemental strand, 10559192 - 10559071
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||| ||| |||| |||||||||||||||||| ||||||| |||| || | || ||| ||||| |||| ||||||||||||||||| | ||||||| |
|
|
| T |
10559192 |
tgagacgagtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgc |
10559093 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| |||| ||||||| |
|
|
| T |
10559092 |
tcacattctcgatgaagataat |
10559071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 657 - 766
Target Start/End: Original strand, 19605788 - 19605897
Alignment:
| Q |
657 |
acaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgctcac |
756 |
Q |
| |
|
|||||| |||| |||||||||||||||||| | ||||| || ||||||| || ||| ||||| |||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
19605788 |
acaagtcttgctatgccaaaatcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcac |
19605887 |
T |
|
| Q |
757 |
attcttgatg |
766 |
Q |
| |
|
|||| ||||| |
|
|
| T |
19605888 |
attcatgatg |
19605897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 10760796 - 10760892
Alignment:
| Q |
322 |
aatcctaaaaagtgaaactaagcactcctctacacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataaga |
418 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| |||||||| || ||| |||||| |||| |||||| |||||||||||||| |||| |
|
|
| T |
10760796 |
aatcctaaacagtgaaactaagcacttctctacacttggaataagattcccattgtttccatcttgtatttctacttttacatctcttgatacaaga |
10760892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 649 - 774
Target Start/End: Complemental strand, 10612004 - 10611879
Alignment:
| Q |
649 |
tggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaa |
748 |
Q |
| |
|
|||| ||||||||| |||| |||||||||||||||||| | |||||||| || || | ||| || ||||| |||| ||||| ||||||||||| | ||| |
|
|
| T |
10612004 |
tggccgagacaagtcttgctatgccaaaatcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatcacaatgaaggaccaa |
10611905 |
T |
|
| Q |
749 |
ttgctcacattcttgatgcagataat |
774 |
Q |
| |
|
|||||||||||| | ||| ||||||| |
|
|
| T |
10611904 |
ttgctcacattcattatgaagataat |
10611879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 602
Target Start/End: Complemental strand, 9825604 - 9825523
Alignment:
| Q |
521 |
gtaagaatttccaacataaggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaa |
602 |
Q |
| |
|
||||| |||||||| ||| | |||||||||||||||||||||||| | ||||| |||| | || |||||||||||||||||| |
|
|
| T |
9825604 |
gtaagcatttccaatataggaattccaaagctatacatgtcaccataagtggaaactttagaatccattccatactctaaaa |
9825523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 355
Target Start/End: Complemental strand, 10551606 - 10551520
Alignment:
| Q |
269 |
acatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctaca |
355 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||| || |||| |||| ||||||||| |||||||| ||| || | ||||||| |
|
|
| T |
10551606 |
acatcaaccatattcattctttcttttggtgattccactgaacaagaaagtgcaatcctaagaagtgaaagtaaacatttctctaca |
10551520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 10551336 - 10551280
Alignment:
| Q |
542 |
attccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactct |
598 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
10551336 |
attccaaagctatacatgtcaccttcagttgacacctcaaaacccattccatactct |
10551280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 760
Target Start/End: Original strand, 9836243 - 9836354
Alignment:
| Q |
649 |
tggctgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaa |
748 |
Q |
| |
|
||||||||| |||| |||| ||||||||||||||||| |||||||||||| || | ||||| | || |||| ||| | |||||||||||| | || |
|
|
| T |
9836243 |
tggctgagataagtcttgctatgccaaaatcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttgatatcacaatgaatgaccac |
9836342 |
T |
|
| Q |
749 |
ttgctcacattc |
760 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9836343 |
ttgctcacattc |
9836354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 10566012 - 10565949
Alignment:
| Q |
119 |
cacctgaaattcaaatcaagaggaagctcgttattgcctttgtattttgtaggttaggaatttt |
182 |
Q |
| |
|
||||||||||||||||||||| ||| | ||||| || ||||||||||||| ||||||||||| |
|
|
| T |
10566012 |
cacctgaaattcaaatcaagaagaaatccattattaccattgtattttgtagtttaggaatttt |
10565949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 9849623 - 9849680
Alignment:
| Q |
242 |
tttctgattatgctaagctctctagtgacatccacaatattcattctttcttttggtg |
299 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
9849623 |
tttctgattatgtttagctctctagtgacatccattgtattcattcttgctttcggtg |
9849680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 255 - 608
Target Start/End: Complemental strand, 12958876 - 12958523
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12958876 |
taagctctctagtgacatcgacaatattcattctttcttttggtgattccaatgaacataaaagtccaatcctaaaaagtgaaactaagcactcctctac |
12958777 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
| ||||| ||||| ||||| |||| |||||||| ||||| | ||| || |||||| || |||| || | ||||| ||| || | ||||||||||||||| |
|
|
| T |
12958776 |
agttggaataagaatctcatgatttccatcttctcttgctccatcttcagctcttggtaaaagatgtggatccaacatctttattagattatcaggaaat |
12958677 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
12958676 |
gaatttgtaacaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctat |
12958577 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
12958576 |
acatgtcaccacatgtggatacttctgaacccatcccatactctaaaacatgta |
12958523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 608
Target Start/End: Complemental strand, 12907988 - 12907635
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||| |||||||| || ||| | |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12907988 |
taagctctctattgacatctacaatattcattctttcttttgttgattccaatgaacataaaagtccaatcctaaaaagtgaagttaagcactcctctac |
12907889 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
| ||||| ||||| ||||| | || ||||||||||| || ||||| || |||||| || |||| || | ||||||||| || ||||||||||||||||| |
|
|
| T |
12907888 |
atttggaataagaatctcatgaattccatcttctattcctccttcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcaggaaat |
12907789 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
12907788 |
gaaattgtaacaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctat |
12907689 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||| ||||||||||||| ||||| |
|
|
| T |
12907688 |
acatgtcaccacaagtggatacttctgaacccaccccatactctaaaatatgta |
12907635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 255 - 606
Target Start/End: Complemental strand, 12933077 - 12932726
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||| ||||||||| ||||||||| ||||| || |||| |
|
|
| T |
12933077 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaacaaagcaatcttctat |
12932978 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
| ||||| || || ||||| |||| |||||||||||||| ||||| || |||||| || |||| || | ||||||||| || ||||||||||||||||| |
|
|
| T |
12932977 |
agttggaatatgaatctcatgatttccatcttctattgctccttcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcaggaaat |
12932878 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
12932877 |
gaaattgtaacaaagttatgcagattttgaccatcttcaaaaagttcatcggtgggtcttctaccagtaagcatttccagcataaggattccaaagctat |
12932778 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatg |
606 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
12932777 |
acatgtcaccacatgtggaaacttctgaacccatcccatactctaaaacatg |
12932726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 255 - 608
Target Start/End: Complemental strand, 12900371 - 12900015
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||| ||||||||| |||||||||||||||||| |||| |
|
|
| T |
12900371 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaactaagcactcttctat |
12900272 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctact---tctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcagga |
451 |
Q |
| |
|
| ||||| || || ||||| |||| |||||||||||||| || ||| || |||||| || |||| || | ||||||||| || |||||||||||||| |
|
|
| T |
12900271 |
agttggaatatgaatctcatgatttccatcttctattgctcctaattcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcagga |
12900172 |
T |
|
| Q |
452 |
aatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagc |
551 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
12900171 |
aatgaaattgtaacaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagc |
12900072 |
T |
|
| Q |
552 |
tatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
|||||||||||||||| ||||| ||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
12900071 |
tatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaatatgta |
12900015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 255 - 608
Target Start/End: Complemental strand, 12949417 - 12949078
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtg-aaactaagcactcctcta |
353 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||| |||||||||||||||||| | ||||| ||||||| |||| |
|
|
| T |
12949417 |
taagctctctagtgacatccacaatattcattctttcatttgatgattccaatgaacaaaaaagtccaatcctaaaaaggggaaactgagcactcttcta |
12949318 |
T |
|
| Q |
354 |
cacttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaa |
453 |
Q |
| |
|
| ||||| ||||| ||||| |||| ||||||| | |||||| || |||| || | ||||||||| || | ||||| ||||| |
|
|
| T |
12949317 |
tagttggaataagaatctcatgatttccatcttc---------------agctcttggtaaaagatgtggatccaaaatctttacgaaattattgggaaa |
12949233 |
T |
|
| Q |
454 |
tgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagcta |
553 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
12949232 |
tgaaattttaacaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagcta |
12949133 |
T |
|
| Q |
554 |
tacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
12949132 |
tacatgtcaccacaagtggatacttccgaacccatcccatactctaaaacatgta |
12949078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 653 - 774
Target Start/End: Complemental strand, 12899860 - 12899739
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| ||||| ||||||||||| | |||||| |
|
|
| T |
12899860 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatcacaatgaaagactaattgc |
12899761 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| |||| ||||||| |
|
|
| T |
12899760 |
tcacattctcgatgaagataat |
12899739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 653 - 766
Target Start/End: Complemental strand, 12932569 - 12932456
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| |||||||||||||||| || || ||| |
|
|
| T |
12932569 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgc |
12932470 |
T |
|
| Q |
753 |
tcacattcttgatg |
766 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
12932469 |
tcacattctcgatg |
12932456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 653 - 774
Target Start/End: Complemental strand, 12948934 - 12948813
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| |||||||||||||||| | |||||| |
|
|
| T |
12948934 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggactaattgc |
12948835 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||| | |||| ||||||| |
|
|
| T |
12948834 |
tcacattatcgatgaagataat |
12948813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 653 - 774
Target Start/End: Complemental strand, 12907480 - 12907359
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| | ||||||||||||| || | |||||| ||||| |||| |||||||||||||| | || || ||| |
|
|
| T |
12907480 |
tgagacaagtcttgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatggaggattaactgc |
12907381 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| |||| ||||||| |
|
|
| T |
12907380 |
tcacattctcgatgaagataat |
12907359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 653 - 774
Target Start/End: Complemental strand, 12958368 - 12958247
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| || ||||||||||||||| ||||||||||||| | | |||||| ||||| |||| |||||||||||| |||| || || ||| |
|
|
| T |
12958368 |
tgagacaagtcttgctattccaaaatcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatcacagtgaaggattaactgc |
12958269 |
T |
|
| Q |
753 |
tcacattcttgatgcagataat |
774 |
Q |
| |
|
||||||||| |||| ||||||| |
|
|
| T |
12958268 |
tcacattctcgatgaagataat |
12958247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 174; Significance: 3e-93; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 255 - 608
Target Start/End: Original strand, 17922808 - 17923161
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17922808 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccaatgaacaaaaaagtccaatcctaaaaagggaaactaagcactcctctac |
17922907 |
T |
|
| Q |
355 |
acttggattaagattctcacaattttcatcttctattgctacttctacatctcttgatataagacgtcggtccaaaatcgttttaagattatcaggaaat |
454 |
Q |
| |
|
| ||||| |||| ||||| |||| |||||||| |||| | ||| || |||||| || |||| || | ||||||||| || ||||||| ||||||| |
|
|
| T |
17922908 |
agttggaagaagaatctcatgatttccatcttctcgtgctccatcttcagctcttggtaaaagatgtggatccaaaatctttataagattgcaaggaaat |
17923007 |
T |
|
| Q |
455 |
gaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaagaatttccaacataaggattccaaagctat |
554 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||| ||||| ||||| | ||||||||| |||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
17923008 |
gaaattgtaacaaagttatgtagattttgaccgtctttaaaaagttcatcggtgggtcttcttccggtaagcatttccagcataaggattccaaagctat |
17923107 |
T |
|
| Q |
555 |
acatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
||||||||||| | ||||| ||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
17923108 |
acatgtcaccataagtggatacttctgaacccatcccatactctaaaatatgta |
17923161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 653 - 766
Target Start/End: Original strand, 17923322 - 17923435
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| |||||||||||||||| || || ||| |
|
|
| T |
17923322 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgc |
17923421 |
T |
|
| Q |
753 |
tcacattcttgatg |
766 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
17923422 |
tcacattctcgatg |
17923435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 128; Significance: 9e-66; HSPs: 2)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 425 - 608
Target Start/End: Complemental strand, 7921 - 7738
Alignment:
| Q |
425 |
tccaaaatcgttttaagattatcaggaaatgaaattgcaacaaagttatgcagattttgaccatcttcaaaaacttcattagcgggtcttctaccggtaa |
524 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||| |
|
|
| T |
7921 |
tccaaaatctttataagattatcaggaaatgaaattgtaacaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaa |
7822 |
T |
|
| Q |
525 |
gaatttccaacataaggattccaaagctatacatgtcaccacacgtggacacttcaaaacccattccatactctaaaacatgta |
608 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
7821 |
gcatttccagcataaggattccaaagctatacatgtcaccacatgtggatacttcttaacccatcccatactctaaaacatgta |
7738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 653 - 766
Target Start/End: Complemental strand, 7583 - 7470
Alignment:
| Q |
653 |
tgagacaagttttgcaatgccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaataatcaattgc |
752 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||||||||||| || | |||||| ||||| |||| ||||||||||||||||| || |||||| |
|
|
| T |
7583 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaagtattaattgc |
7484 |
T |
|
| Q |
753 |
tcacattcttgatg |
766 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
7483 |
tcacattctcgatg |
7470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 31466548 - 31466648
Alignment:
| Q |
255 |
taagctctctagtgacatccacaatattcattctttcttttggtgattccattgtacaaataagtccaatcctaaaaagtgaaactaagcactcctctac |
354 |
Q |
| |
|
||||||||||| |||| || || ||| |||| |||||||||||||||||||||| |||| |||| |||| ||||||||||||| ||| || | |||||| |
|
|
| T |
31466548 |
taagctctctaatgacttcaaccatactcatcctttcttttggtgattccattgaacaaccaagtgcaatactaaaaagtgaaattaaacatttctctac |
31466647 |
T |
|
| Q |
355 |
a |
355 |
Q |
| |
|
| |
|
|
| T |
31466648 |
a |
31466648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 671 - 741
Target Start/End: Original strand, 39875829 - 39875899
Alignment:
| Q |
671 |
gccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaa |
741 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| |||||| ||||| |||| |||| ||||||||||| |
|
|
| T |
39875829 |
gccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39875899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 671 - 741
Target Start/End: Original strand, 39883952 - 39884022
Alignment:
| Q |
671 |
gccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaa |
741 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| |||||| ||||| |||| |||| ||||||||||| |
|
|
| T |
39883952 |
gccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39884022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 671 - 741
Target Start/End: Original strand, 39890906 - 39890976
Alignment:
| Q |
671 |
gccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaa |
741 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || | |||||| ||||| |||| |||| ||||||||||| |
|
|
| T |
39890906 |
gccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatgaa |
39890976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 742
Target Start/End: Complemental strand, 28605894 - 28605824
Alignment:
| Q |
672 |
ccaaaatcactcacaagagcaaccatgtcgtcgttaagaagaacattacttgcctttagatcacaatgaat |
742 |
Q |
| |
|
||||||||||||||| ||||||||||||| | | |||||||| ||| |||| ||||| |||||||||||| |
|
|
| T |
28605894 |
ccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatgaat |
28605824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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