View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10853_10 (Length: 324)
Name: NF10853_10
Description: NF10853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10853_10 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 40284760 - 40285055
Alignment:
| Q |
27 |
acctcaccctttacctggctttgtattctctttggtgtgatcaaactttctaaaaaccatattaggtacaaggatggagcaatagacgaacattacctat |
126 |
Q |
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| T |
40284760 |
acctcaccctttacctggctttgtattctctttggtgtgatcaaactttctaaaaaccatgtaaggtacaaggatggagcaatagacgaacattacctat |
40284859 |
T |
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| Q |
127 |
gatcttgacctaaaaacgcagatgacatgcttatctta--------------------aatataaaacattttctgtcaccatgcttgcaacaaatagca |
206 |
Q |
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| T |
40284860 |
gatcttgacctaaaaacgcagatgacatgcttatcttatcttatcttagagtccaataaatataaaacattttctgtcaccatgcttgcaacaaatagca |
40284959 |
T |
|
| Q |
207 |
agttaaccaagttacaatttaaaaaatattcaaactccttcctaaagaatataggcataagcacaaaaaatggccaaaaataaatttgctgatgat |
302 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
40284960 |
agttaaccaagttacaatttaaaaaatattcaatctccttcctaaagaatataggcataagcacaaaaaatgtccaaaaataaatttgctgatgat |
40285055 |
T |
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