View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10853_11 (Length: 319)
Name: NF10853_11
Description: NF10853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10853_11 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 68 - 313
Target Start/End: Complemental strand, 22809335 - 22809086
Alignment:
| Q |
68 |
gtcttgttatgacgtttatctgcctaggaaaatgtcttgttacgacgtctatctgcctaggaaaagcaagacttgaacacgcaagtgtcaaccatatat- |
166 |
Q |
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| T |
22809335 |
gtcttgttatgacgtttatctgcctaggaaaatgtcttgttacgacgtctatctgcctaggaaaaacaagacttgaacacgcaagtgtcaaccatatata |
22809236 |
T |
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| Q |
167 |
---gtatccatataatttttggatttgagattcgaacaccgaccaccacaaagaaaaaagataatattttatatgaatgatatacggcatttgcagaggg |
263 |
Q |
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| T |
22809235 |
tatgtatccaaataatttttggatttgaggttcgaacaccaaccatcataaaaaaaaaacataatattttatatgaatgatatacggcatctgcagaggg |
22809136 |
T |
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| Q |
264 |
tgttaaattaccactcttcatgaatatccctttaatccatttcatctcac |
313 |
Q |
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| T |
22809135 |
tgttaaattaccactcttcatgaatatccctttaatccatttcatttcac |
22809086 |
T |
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