View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_123 (Length: 343)
Name: NF10855A_low_123
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_123 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 21 - 328
Target Start/End: Complemental strand, 27101342 - 27101035
Alignment:
| Q |
21 |
gatgatacatcaaatatgaaggtagagatcatatatcctctgagaatattacaaaataacttttatatgtatatatattataggaaaatactaccaacac |
120 |
Q |
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| T |
27101342 |
gatgatacatcaaatatgaaggtagagatcatatatcctctgagaatattacaaaataacttttatatgtatatatattatagaaaaatactaccaacac |
27101243 |
T |
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| Q |
121 |
actttttgacacacttaaaatttatgtggtcctatcaaaattaaacggagaccacattttgtgttgggactaaaatagtaggattaacttgaattacaag |
220 |
Q |
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| T |
27101242 |
attttttgacacacttaaaatttacgtggtcctatcaaaattaaacggagaccacattttgtgttaggactaaaatagtaggattaacttgaattacaag |
27101143 |
T |
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| Q |
221 |
taatagcnnnnnnngagtctaaacattgtatcctaaaaacattactatagaattaccttttaaactgtatatcctataacagccaatactactgtactgc |
320 |
Q |
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| T |
27101142 |
taatagctttttttgagtctaaacattgtatcctaaaaacattactatagaattaccttttaaactgtatatcctataacagccaatactactgtactgc |
27101043 |
T |
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| Q |
321 |
ctgtcaat |
328 |
Q |
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| T |
27101042 |
ctgtcaat |
27101035 |
T |
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