View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_154 (Length: 314)
Name: NF10855A_low_154
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_154 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 12 - 296
Target Start/End: Original strand, 49086300 - 49086584
Alignment:
| Q |
12 |
atgaaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgttg |
111 |
Q |
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| T |
49086300 |
atgaaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgttg |
49086399 |
T |
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| Q |
112 |
tgggatctgtcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaattttcattgaatgcagaaactgt |
211 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
49086400 |
tgggatctggcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaattttcattgcatgcagaaactgt |
49086499 |
T |
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| Q |
212 |
tggttttataagtctataagtttatccaaatgtcggtgaaacgactcgatctaagccacgtctccttcattccattgtcccttct |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
49086500 |
tggttttataagtctataagtttatccaaatgtcggtgaaacgacccgatctaagccacgtctccttcattccattgtcccttct |
49086584 |
T |
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