View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10855A_low_20 (Length: 461)

Name: NF10855A_low_20
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10855A_low_20
NF10855A_low_20
[»] chr2 (66 HSPs)
chr2 (154-456)||(41569122-41569411)
chr2 (14-129)||(41569469-41569585)
chr2 (154-278)||(18176996-18177120)
chr2 (154-281)||(29051543-29051668)
chr2 (154-281)||(433906-434033)
chr2 (168-281)||(7552625-7552740)
chr2 (154-277)||(42223844-42223967)
chr2 (154-281)||(31389603-31389730)
chr2 (175-281)||(670360-670466)
chr2 (154-280)||(4952369-4952495)
chr2 (191-281)||(17779475-17779565)
chr2 (154-278)||(4758530-4758654)
chr2 (164-282)||(2464137-2464254)
chr2 (168-277)||(28679387-28679495)
chr2 (154-277)||(35705550-35705672)
chr2 (156-227)||(37257508-37257579)
chr2 (155-281)||(29879899-29880025)
chr2 (175-280)||(5027233-5027338)
chr2 (154-281)||(42678805-42678933)
chr2 (154-249)||(26738801-26738895)
chr2 (166-277)||(6941011-6941118)
chr2 (166-270)||(5200125-5200228)
chr2 (154-281)||(6170686-6170813)
chr2 (154-281)||(6998956-6999083)
chr2 (154-281)||(40936952-40937079)
chr2 (164-281)||(32869892-32870009)
chr2 (154-281)||(2221049-2221176)
chr2 (168-278)||(4753231-4753340)
chr2 (154-227)||(39213712-39213785)
chr2 (154-286)||(10711780-10711912)
chr2 (154-281)||(23352795-23352920)
chr2 (154-277)||(7574491-7574614)
chr2 (154-275)||(9377512-9377633)
chr2 (167-232)||(20911870-20911935)
chr2 (154-211)||(28245784-28245841)
chr2 (15-68)||(41588523-41588576)
chr2 (154-281)||(42866806-42866933)
chr2 (168-275)||(11384908-11385016)
chr2 (154-282)||(29712034-29712161)
chr2 (154-277)||(5054664-5054787)
chr2 (154-277)||(9634328-9634451)
chr2 (154-281)||(13765456-13765583)
chr2 (167-281)||(18876808-18876923)
chr2 (154-281)||(34119540-34119667)
chr2 (154-283)||(13347700-13347830)
chr2 (166-280)||(37105706-37105820)
chr2 (154-227)||(25881600-25881673)
chr2 (154-227)||(35589329-35589402)
chr2 (154-191)||(36802952-36802989)
chr2 (154-210)||(42532697-42532754)
chr2 (154-239)||(44711919-44712004)
chr2 (154-278)||(36211951-36212074)
chr2 (168-278)||(7648460-7648570)
chr2 (154-281)||(15269917-15270044)
chr2 (155-202)||(26277152-26277199)
chr2 (164-239)||(28244171-28244245)
chr2 (234-277)||(29684552-29684595)
chr2 (168-278)||(2563774-2563884)
chr2 (154-204)||(4139272-4139322)
chr2 (154-188)||(38560734-38560768)
chr2 (154-211)||(42372535-42372593)
chr2 (166-227)||(17999620-17999680)
chr2 (154-211)||(18723650-18723707)
chr2 (154-223)||(39449323-39449392)
chr2 (167-203)||(13711332-13711368)
chr2 (154-209)||(40700251-40700307)
[»] chr7 (62 HSPs)
chr7 (154-284)||(29162861-29162991)
chr7 (154-281)||(32815224-32815351)
chr7 (154-282)||(39231615-39231743)
chr7 (154-278)||(13162975-13163099)
chr7 (154-281)||(37808652-37808779)
chr7 (154-281)||(19785967-19786094)
chr7 (154-281)||(38779632-38779759)
chr7 (154-281)||(40353320-40353447)
chr7 (154-289)||(47078132-47078266)
chr7 (167-284)||(41402577-41402694)
chr7 (154-281)||(21023005-21023132)
chr7 (154-281)||(41666810-41666937)
chr7 (167-279)||(13906347-13906459)
chr7 (159-277)||(29002669-29002785)
chr7 (155-278)||(39137209-39137332)
chr7 (168-281)||(26041208-26041320)
chr7 (155-232)||(39332042-39332119)
chr7 (154-282)||(23048287-23048414)
chr7 (154-280)||(10055521-10055647)
chr7 (155-281)||(28036801-28036927)
chr7 (185-278)||(46773555-46773648)
chr7 (157-281)||(39823868-39823991)
chr7 (159-281)||(4713634-4713757)
chr7 (154-281)||(13729782-13729909)
chr7 (154-281)||(44494986-44495112)
chr7 (155-275)||(27163554-27163673)
chr7 (154-281)||(7817693-7817819)
chr7 (154-281)||(47495026-47495154)
chr7 (154-281)||(11352862-11352989)
chr7 (155-277)||(3062387-3062509)
chr7 (154-284)||(33180595-33180725)
chr7 (154-283)||(21822485-21822614)
chr7 (172-281)||(41026132-41026228)
chr7 (154-227)||(44184501-44184574)
chr7 (179-272)||(46148073-46148165)
chr7 (154-274)||(46532558-46532679)
chr7 (154-277)||(35452464-35452588)
chr7 (159-239)||(35588821-35588901)
chr7 (154-281)||(43573431-43573558)
chr7 (154-281)||(36019473-36019591)
chr7 (154-284)||(41893971-41894101)
chr7 (155-270)||(16980354-16980468)
chr7 (154-224)||(11564949-11565018)
chr7 (154-227)||(18111553-18111627)
chr7 (154-188)||(20482583-20482617)
chr7 (154-211)||(21559854-21559911)
chr7 (154-283)||(41399049-41399178)
chr7 (168-271)||(46829549-46829653)
chr7 (159-227)||(12645852-12645920)
chr7 (154-276)||(41018719-41018842)
chr7 (170-276)||(6109863-6109970)
chr7 (154-281)||(41458652-41458779)
chr7 (155-241)||(31844533-31844619)
chr7 (252-282)||(34757357-34757387)
chr7 (154-203)||(35600727-35600777)
chr7 (154-227)||(39029914-39029988)
chr7 (154-188)||(40231687-40231721)
chr7 (154-223)||(3343276-3343345)
chr7 (164-277)||(25067289-25067402)
chr7 (167-216)||(46653040-46653089)
chr7 (169-276)||(4225823-4225931)
chr7 (169-276)||(46725676-46725784)
[»] chr4 (75 HSPs)
chr4 (154-281)||(41486031-41486158)
chr4 (154-282)||(30079902-30080030)
chr4 (154-284)||(14451449-14451579)
chr4 (154-283)||(21260354-21260483)
chr4 (154-282)||(33899213-33899341)
chr4 (155-283)||(51746277-51746405)
chr4 (154-281)||(5932046-5932172)
chr4 (154-281)||(9118752-9118879)
chr4 (155-281)||(42959328-42959455)
chr4 (154-281)||(6141666-6141793)
chr4 (154-281)||(51194325-51194452)
chr4 (164-283)||(53152207-53152326)
chr4 (164-281)||(12112693-12112810)
chr4 (154-277)||(624203-624327)
chr4 (154-281)||(47965795-47965920)
chr4 (179-282)||(50272960-50273063)
chr4 (167-284)||(17475946-17476062)
chr4 (154-278)||(25317957-25318080)
chr4 (154-277)||(31076110-31076232)
chr4 (154-260)||(36111304-36111411)
chr4 (154-281)||(37066044-37066170)
chr4 (154-278)||(26206868-26206992)
chr4 (154-278)||(41082374-41082497)
chr4 (168-281)||(35820241-35820354)
chr4 (154-281)||(54669472-54669598)
chr4 (154-277)||(439152-439275)
chr4 (166-281)||(2256219-2256333)
chr4 (164-281)||(23822136-23822250)
chr4 (168-277)||(48536366-48536477)
chr4 (154-281)||(39344868-39344995)
chr4 (154-283)||(28657327-28657456)
chr4 (168-277)||(13389342-13389453)
chr4 (164-282)||(43326230-43326350)
chr4 (154-283)||(41389759-41389887)
chr4 (154-281)||(2999168-2999295)
chr4 (154-281)||(22819705-22819832)
chr4 (168-283)||(33860716-33860832)
chr4 (154-280)||(26718424-26718550)
chr4 (154-280)||(26731052-26731178)
chr4 (154-283)||(47099078-47099205)
chr4 (168-281)||(12799784-12799897)
chr4 (154-223)||(14010064-14010133)
chr4 (154-227)||(28458319-28458392)
chr4 (154-219)||(30169970-30170035)
chr4 (154-227)||(46405916-46405989)
chr4 (154-227)||(49896608-49896681)
chr4 (154-282)||(13086078-13086206)
chr4 (154-277)||(38715303-38715427)
chr4 (154-282)||(43769767-43769895)
chr4 (169-276)||(54802568-54802676)
chr4 (154-277)||(55601600-55601716)
chr4 (156-227)||(27326694-27326765)
chr4 (154-280)||(13139204-13139329)
chr4 (168-284)||(42815474-42815591)
chr4 (154-232)||(48335610-48335688)
chr4 (154-224)||(51573577-51573647)
chr4 (155-188)||(13263378-13263411)
chr4 (154-227)||(31657702-31657775)
chr4 (154-277)||(18882867-18882990)
chr4 (154-280)||(45143562-45143686)
chr4 (154-280)||(45152331-45152455)
chr4 (167-277)||(53647316-53647427)
chr4 (164-210)||(6494852-6494898)
chr4 (167-281)||(12138922-12139036)
chr4 (154-188)||(21617239-21617273)
chr4 (168-281)||(42667275-42667389)
chr4 (154-224)||(45851816-45851885)
chr4 (154-278)||(53405719-53405845)
chr4 (155-211)||(34995377-34995434)
chr4 (168-275)||(37514025-37514133)
chr4 (154-223)||(38338868-38338937)
chr4 (252-281)||(40609769-40609798)
chr4 (168-277)||(56271430-56271539)
chr4 (246-278)||(6494535-6494567)
chr4 (155-211)||(49768276-49768332)
[»] chr3 (65 HSPs)
chr3 (154-281)||(44677372-44677499)
chr3 (154-283)||(37508384-37508513)
chr3 (154-281)||(10206861-10206988)
chr3 (154-282)||(390865-390993)
chr3 (154-278)||(28419105-28419229)
chr3 (154-278)||(32767732-32767856)
chr3 (155-286)||(36121878-36122009)
chr3 (154-281)||(39670985-39671112)
chr3 (154-275)||(39020052-39020174)
chr3 (155-287)||(54195396-54195529)
chr3 (154-281)||(33375916-33376048)
chr3 (154-281)||(11633669-11633796)
chr3 (154-281)||(43905029-43905156)
chr3 (154-284)||(22371247-22371377)
chr3 (159-273)||(30909090-30909204)
chr3 (154-277)||(49363143-49363266)
chr3 (167-281)||(54773641-54773755)
chr3 (154-284)||(54027998-54028128)
chr3 (175-277)||(55013079-55013181)
chr3 (164-281)||(29633960-29634077)
chr3 (154-278)||(46982794-46982918)
chr3 (154-277)||(49417631-49417753)
chr3 (154-283)||(26996372-26996500)
chr3 (177-281)||(35201428-35201531)
chr3 (154-284)||(51973253-51973383)
chr3 (154-227)||(8821686-8821759)
chr3 (168-281)||(21195779-21195891)
chr3 (154-281)||(37927092-37927220)
chr3 (164-275)||(13934497-13934607)
chr3 (154-281)||(55400055-55400182)
chr3 (154-283)||(24095292-24095421)
chr3 (154-282)||(49761363-49761491)
chr3 (154-219)||(46984582-46984647)
chr3 (154-281)||(24482851-24482978)
chr3 (154-281)||(51465802-51465929)
chr3 (154-227)||(39697164-39697237)
chr3 (154-227)||(39907488-39907561)
chr3 (168-281)||(49167821-49167933)
chr3 (154-227)||(52937239-52937312)
chr3 (154-282)||(21196180-21196308)
chr3 (154-227)||(46253678-46253751)
chr3 (154-211)||(50638309-50638366)
chr3 (155-283)||(3281602-3281730)
chr3 (154-277)||(8846547-8846671)
chr3 (154-273)||(24645412-24645531)
chr3 (154-277)||(46019518-46019641)
chr3 (154-281)||(46852020-46852147)
chr3 (154-281)||(50206858-50206985)
chr3 (167-281)||(6999239-6999353)
chr3 (168-281)||(9158760-9158874)
chr3 (157-227)||(24480393-24480463)
chr3 (154-203)||(37035491-37035541)
chr3 (154-278)||(20080129-20080253)
chr3 (154-284)||(36412179-36412310)
chr3 (154-210)||(52485528-52485585)
chr3 (154-209)||(23770705-23770758)
chr3 (154-282)||(34057840-34057968)
chr3 (154-281)||(3953363-3953490)
chr3 (154-280)||(51343464-51343591)
chr3 (168-218)||(9753409-9753459)
chr3 (235-277)||(30862965-30863007)
chr3 (154-224)||(31376711-31376780)
chr3 (168-275)||(29573249-29573357)
chr3 (154-210)||(44813406-44813463)
chr3 (159-211)||(54694071-54694123)
[»] chr5 (47 HSPs)
chr5 (154-283)||(5042304-5042433)
chr5 (154-281)||(35098893-35099020)
chr5 (164-281)||(2688874-2688991)
chr5 (154-278)||(8267711-8267835)
chr5 (154-281)||(16437452-16437580)
chr5 (154-281)||(4430824-4430951)
chr5 (164-283)||(33620674-33620793)
chr5 (154-283)||(21064112-21064241)
chr5 (154-280)||(6930948-6931074)
chr5 (167-283)||(23126227-23126342)
chr5 (154-281)||(37700516-37700642)
chr5 (154-277)||(5821503-5821627)
chr5 (154-277)||(2224846-2224970)
chr5 (154-232)||(18842258-18842336)
chr5 (168-282)||(39088756-39088869)
chr5 (154-281)||(43441794-43441921)
chr5 (164-273)||(15267850-15267959)
chr5 (154-283)||(39628845-39628974)
chr5 (168-277)||(42267416-42267524)
chr5 (154-281)||(41175594-41175721)
chr5 (154-283)||(8675319-8675448)
chr5 (154-278)||(9226357-9226481)
chr5 (168-277)||(17402814-17402922)
chr5 (154-278)||(15952936-15953060)
chr5 (154-281)||(10649491-10649618)
chr5 (154-281)||(189591-189718)
chr5 (165-278)||(41724256-41724370)
chr5 (154-284)||(43213944-43214074)
chr5 (154-227)||(9581635-9581708)
chr5 (154-227)||(19839928-19840001)
chr5 (205-273)||(9977212-9977280)
chr5 (154-281)||(19481070-19481197)
chr5 (154-277)||(38704089-38704212)
chr5 (154-280)||(3640086-3640212)
chr5 (168-284)||(6940034-6940151)
chr5 (154-284)||(34124677-34124807)
chr5 (154-227)||(20770187-20770260)
chr5 (154-283)||(32912094-32912223)
chr5 (154-238)||(18397096-18397180)
chr5 (154-221)||(6517768-6517835)
chr5 (154-227)||(1839287-1839360)
chr5 (154-227)||(15478714-15478787)
chr5 (154-210)||(43196584-43196640)
chr5 (168-281)||(9939319-9939433)
chr5 (168-281)||(18695388-18695502)
chr5 (155-189)||(6292178-6292212)
chr5 (154-188)||(21136319-21136353)
[»] chr1 (75 HSPs)
chr1 (154-283)||(20565004-20565133)
chr1 (154-284)||(3603167-3603297)
chr1 (154-275)||(756912-757033)
chr1 (154-278)||(33024462-33024586)
chr1 (154-278)||(38303579-38303703)
chr1 (154-281)||(1852839-1852966)
chr1 (154-281)||(7128174-7128301)
chr1 (154-281)||(8411606-8411733)
chr1 (154-281)||(26837508-26837635)
chr1 (154-275)||(3024644-3024765)
chr1 (155-283)||(26585765-26585893)
chr1 (154-282)||(46082008-46082136)
chr1 (154-281)||(902694-902821)
chr1 (154-281)||(4514342-4514469)
chr1 (154-281)||(9008281-9008408)
chr1 (154-282)||(51191844-51191972)
chr1 (154-282)||(36779156-36779284)
chr1 (154-281)||(21340578-21340704)
chr1 (154-289)||(47214264-47214398)
chr1 (154-277)||(51286260-51286382)
chr1 (154-282)||(34008236-34008363)
chr1 (154-281)||(16986994-16987120)
chr1 (154-278)||(1790564-1790688)
chr1 (154-274)||(36673627-36673746)
chr1 (164-284)||(37178769-37178890)
chr1 (154-250)||(46172326-46172422)
chr1 (154-281)||(50781458-50781585)
chr1 (154-276)||(44632584-44632705)
chr1 (154-283)||(52362538-52362667)
chr1 (154-218)||(21486268-21486332)
chr1 (154-281)||(50328029-50328156)
chr1 (154-284)||(13489718-13489848)
chr1 (154-281)||(40316832-40316959)
chr1 (215-277)||(36494568-36494630)
chr1 (154-227)||(32319252-32319324)
chr1 (164-281)||(50881998-50882115)
chr1 (154-282)||(10889933-10890061)
chr1 (154-281)||(32914960-32915087)
chr1 (154-289)||(34254231-34254366)
chr1 (154-276)||(41507087-41507210)
chr1 (164-273)||(24673132-24673240)
chr1 (167-283)||(48326037-48326152)
chr1 (154-281)||(50824797-50824924)
chr1 (155-282)||(8447793-8447920)
chr1 (154-280)||(33358047-33358174)
chr1 (154-281)||(36577300-36577427)
chr1 (154-200)||(29586049-29586095)
chr1 (164-277)||(38713636-38713749)
chr1 (154-282)||(8200131-8200259)
chr1 (154-227)||(34040440-34040515)
chr1 (154-278)||(52714792-52714916)
chr1 (164-278)||(35539164-35539278)
chr1 (154-281)||(46543331-46543457)
chr1 (154-281)||(47721465-47721592)
chr1 (154-281)||(47728457-47728584)
chr1 (154-224)||(48220089-48220159)
chr1 (155-280)||(50433826-50433952)
chr1 (154-227)||(15015454-15015527)
chr1 (154-227)||(19969504-19969577)
chr1 (154-283)||(35136900-35137029)
chr1 (156-227)||(3226002-3226073)
chr1 (243-282)||(29586978-29587017)
chr1 (254-284)||(21486218-21486248)
chr1 (154-224)||(44789089-44789158)
chr1 (154-224)||(46911349-46911418)
chr1 (154-203)||(49660235-49660285)
chr1 (154-187)||(33054070-33054103)
chr1 (154-227)||(37588618-37588690)
chr1 (155-188)||(48624933-48624966)
chr1 (154-211)||(49241463-49241520)
chr1 (169-210)||(50242382-50242423)
chr1 (256-284)||(21093243-21093271)
chr1 (168-282)||(46281506-46281621)
chr1 (154-281)||(47215617-47215744)
chr1 (154-217)||(48261195-48261259)
[»] chr8 (56 HSPs)
chr8 (154-281)||(1633778-1633905)
chr8 (154-282)||(7955894-7956022)
chr8 (154-281)||(16966841-16966968)
chr8 (154-281)||(36110194-36110321)
chr8 (168-281)||(32843830-32843943)
chr8 (154-281)||(11017861-11017988)
chr8 (154-275)||(11657895-11658015)
chr8 (154-281)||(30135902-30136030)
chr8 (154-281)||(7478836-7478962)
chr8 (154-284)||(1871500-1871629)
chr8 (154-284)||(7586048-7586177)
chr8 (154-280)||(37783860-37783986)
chr8 (154-248)||(45529167-45529261)
chr8 (156-281)||(13971182-13971303)
chr8 (174-281)||(34591340-34591447)
chr8 (154-277)||(35564345-35564468)
chr8 (154-281)||(40739801-40739927)
chr8 (154-284)||(7592905-7593036)
chr8 (155-281)||(32847574-32847701)
chr8 (154-281)||(33589119-33589245)
chr8 (154-277)||(41521024-41521147)
chr8 (154-278)||(36531651-36531774)
chr8 (154-283)||(2733044-2733173)
chr8 (154-283)||(6968119-6968248)
chr8 (154-281)||(30439394-30439521)
chr8 (154-278)||(38234063-38234191)
chr8 (154-227)||(41159831-41159904)
chr8 (154-281)||(16872044-16872171)
chr8 (212-278)||(29867191-29867257)
chr8 (154-284)||(31597004-31597134)
chr8 (155-280)||(42110071-42110196)
chr8 (200-277)||(18651463-18651539)
chr8 (154-277)||(4994437-4994561)
chr8 (154-281)||(6991695-6991823)
chr8 (156-281)||(39493814-39493940)
chr8 (154-281)||(9208122-9208248)
chr8 (154-281)||(12707205-12707333)
chr8 (154-281)||(36885376-36885502)
chr8 (169-275)||(888150-888257)
chr8 (155-216)||(1366657-1366718)
chr8 (168-283)||(10644687-10644803)
chr8 (168-248)||(8645234-8645314)
chr8 (154-198)||(36568014-36568058)
chr8 (155-277)||(38708186-38708310)
chr8 (154-188)||(9549180-9549214)
chr8 (154-227)||(16327093-16327167)
chr8 (154-188)||(16613690-16613724)
chr8 (154-276)||(23792983-23793105)
chr8 (154-224)||(29991468-29991537)
chr8 (154-188)||(34718171-34718205)
chr8 (154-211)||(7472984-7473041)
chr8 (172-241)||(39543451-39543520)
chr8 (154-210)||(5277663-5277719)
chr8 (255-283)||(5864350-5864378)
chr8 (167-278)||(14707234-14707345)
chr8 (155-223)||(29028907-29028975)
[»] scaffold0471 (1 HSPs)
scaffold0471 (154-281)||(63-190)
[»] chr6 (33 HSPs)
chr6 (154-281)||(3610849-3610976)
chr6 (167-280)||(14986633-14986746)
chr6 (154-278)||(34504076-34504200)
chr6 (154-277)||(2075343-2075466)
chr6 (154-281)||(11547417-11547544)
chr6 (167-281)||(5327479-5327593)
chr6 (154-277)||(2777209-2777331)
chr6 (166-277)||(30036686-30036797)
chr6 (154-276)||(335119-335239)
chr6 (154-277)||(22341067-22341189)
chr6 (154-277)||(30152422-30152545)
chr6 (154-281)||(35213449-35213576)
chr6 (154-278)||(3199016-3199139)
chr6 (154-232)||(4820307-4820387)
chr6 (154-278)||(13658888-13659011)
chr6 (154-283)||(13143268-13143397)
chr6 (154-281)||(754326-754453)
chr6 (155-246)||(14693175-14693266)
chr6 (154-281)||(18141189-18141316)
chr6 (167-281)||(32459404-32459518)
chr6 (154-227)||(14699606-14699679)
chr6 (168-281)||(23628429-23628545)
chr6 (154-277)||(20822761-20822883)
chr6 (168-278)||(1369430-1369540)
chr6 (154-283)||(2688950-2689079)
chr6 (154-282)||(28041700-28041829)
chr6 (154-281)||(6531068-6531198)
chr6 (154-273)||(26832702-26832821)
chr6 (154-277)||(32046754-32046877)
chr6 (154-203)||(10335606-10335656)
chr6 (154-224)||(33421816-33421885)
chr6 (154-211)||(24842424-24842480)
chr6 (165-273)||(2943501-2943609)
[»] scaffold0449 (1 HSPs)
scaffold0449 (155-283)||(9260-9388)
[»] scaffold0687 (1 HSPs)
scaffold0687 (154-284)||(2253-2384)
[»] scaffold0014 (1 HSPs)
scaffold0014 (154-278)||(122887-123009)
[»] scaffold0136 (1 HSPs)
scaffold0136 (154-281)||(38481-38608)
[»] scaffold0532 (1 HSPs)
scaffold0532 (154-281)||(11020-11147)
[»] scaffold0010 (1 HSPs)
scaffold0010 (154-276)||(134195-134318)
[»] scaffold0321 (1 HSPs)
scaffold0321 (154-232)||(19692-19770)
[»] scaffold1956 (1 HSPs)
scaffold1956 (154-227)||(825-899)
[»] scaffold0204 (1 HSPs)
scaffold0204 (154-232)||(23132-23210)
[»] scaffold0141 (1 HSPs)
scaffold0141 (159-281)||(11993-12115)
[»] scaffold0416 (1 HSPs)
scaffold0416 (154-203)||(6914-6963)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 154 - 456
Target Start/End: Complemental strand, 41569411 - 41569122
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||| | |     
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaataagttatcat 41569312  T
Q  254 caaattggttgttcaaataacactcctcattcaattcaatatctactactcaatcatcgaataatcgtgtcaaagaagtaatcttaaatcttttgctcat 353  Q
    |||||||||||||||||||| |||| ||      |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  41569311 caaattggttgttcaaataatactcatc-----tttcaatatctactactcaatcat---ataatcgtgtcaaagaagtaatcttaaatcttttgctcat 41569220  T
Q  354 ttgacaacactttgcatatggactcaataaatcattatcataaattacaacatatattattggctattgctgcactgcaataaacaaaaaacttcatcct 453  Q
    ||||||||     |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41569219 ttgacaac-----gcatatggactcaaaaaatcattatcataaactacaacatatattattggctattgctgcactgcaataaacaaaaaacttcatcct 41569125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 41569585 - 41569469
Alignment:
Q  14 gaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaat 112  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41569585 gaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaat 41569486  T
Q  113 ttaattaaggtccattt 129  Q
    |||||||||||||||||    
T  41569485 ttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 18176996 - 18177120
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||| ||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcac 18177095  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| |||||||||||||||||    
T  18177096 caaattgattgttcaaataacactc 18177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 29051668 - 29051543
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||| | ||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttatcac 29051571  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  29051570 caaattggttgttcaaataacactcctc 29051543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 433906 - 434033
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 434005  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
     |||||| ||||||||||||||||||||    
T  434006 aaaattgattgttcaaataacactcctc 434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 7552625 - 7552740
Alignment:
Q  168 tttttactttatctctctattactatggt--ttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||| |||||||||||| |||| ||||||||| ||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaaataaattgtcaccaaattgattgt 7552724  T
Q  266 tcaaataacactcctc 281  Q
    ||||||||||||||||    
T  7552725 tcaaataacactcctc 7552740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 42223967 - 42223844
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||| ||||||| ||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| || | ||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgttaaataaattatcac 42223868  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||||||||||||||||||||    
T  42223867 caaattggttgttcaaataacact 42223844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 31389603 - 31389730
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| ||||||| || |||||  ||||||||||||| |||||| ||||||||||||||||  |||  |||||||||||||||| |     
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaagttatggttgtcaaataagttgtcat 31389702  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  31389703 caaattggttgttcaaataacactcctc 31389730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 670466 - 670360
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataac 274  Q
    |||||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||  |||||||||||||||| | |||||||||||||||||||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataac 670367  T
Q  275 actcctc 281  Q
    |||||||    
T  670366 actcctc 670360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 4952495 - 4952369
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||| ||||| || |||||||| || | |     
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaataaattatcat 4952396  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    ||||||| ||||| |||||||||||||    
T  4952395 caaattgattgtttaaataacactcct 4952369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 17779475 - 17779565
Alignment:
Q  191 tatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacactcctc 281  Q
    ||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacacccctc 17779565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 4758654 - 4758530
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| |||  ||| ||| |||||||| || | ||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaaataaattatcac 4758555  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| ||||| |||||||||||    
T  4758554 caaattgattgttgaaataacactc 4758530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 2464254 - 2464137
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||| |||||||||||||||| ||||| |||||||| |||||| || |||||||||||||  |||  |||||||||||||| | | ||||||||||    
T  2464254 ttatttttaactttatctctctattgctatg-tttccgtgtcaatactacctttttctttgtaagttatggttgtcaaataagttttcatcaaattggtt 2464156  T
Q  264 gttcaaataacactcctca 282  Q
    ||| |||||||||||||||    
T  2464155 gtttaaataacactcctca 2464137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 28679387 - 28679495
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||| ||||| || |||||| ||||||| |||| |||  |||  |||||||||||||||| ||||||||||||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactacttttt-ctttataaattatggttgtcaaataagttgtgaccaaattggttgttc 28679485  T
Q  268 aaataacact 277  Q
    ||||||||||    
T  28679486 aaataacact 28679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 35705550 - 35705672
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||| |||||| || |||||||||||||  |||  |||| |||||| |||| ||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaaattatggttgttaaataaattgtcac 35705648  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||| ||||||||||||||||    
T  35705649 caaattgattgttcaaataacact 35705672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 37257508 - 37257579
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgtaa 37257579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 29879899 - 29880025
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||| |||||| ||||||| |||| |||  |||  |||||||||||||| | | |    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttcctttataagttatggttgtcaaataagttttcatc 29879998  T
Q  255 aaattggttgttcaaataacactcctc 281  Q
    ||||| ||||||||||||||| |||||    
T  29879999 aaattagttgttcaaataacaatcctc 29880025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 5027233 - 5027338
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataac 274  Q
    |||||||||||||| ||||||||| ||||||||||| | |||||||||||||| ||||| || |||||||| || | | ||||||| ||||| |||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaataaattatcatcaaattgattgtttaaataac 5027332  T
Q  275 actcct 280  Q
    ||||||    
T  5027333 actcct 5027338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 42678805 - 42678933
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaatatataattgtcaaataagttgt-t 251  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||  |||  |||||| | || ||||      
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaattatggttgtcaca-aaattgtca 42678903  T
Q  252 accaaattggttgttcaaataacactcctc 281  Q
    ||||| ||| ||||||||||||||||||||    
T  42678904 accaatttgattgttcaaataacactcctc 42678933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 26738895 - 26738801
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttg 249  Q
    |||||| || |||||||||| |||||||||||||| |||||||||| |||||||||  || ||||||||||||| |||| ||||||||||||||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaaataagttg 26738801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 277
Target Start/End: Original strand, 6941011 - 6941118
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||||||     ||||  ||| ||||||||||||||| | | ||||||||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactactttttc----gtaaattatgattgtcaaataagttatcatcaaattggttgt 6941106  T
Q  266 tcaaataacact 277  Q
    ||||||||||||    
T  6941107 tcaaataacact 6941118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 5200228 - 5200125
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| || |||||||||||||  |||  |||||||||||||||| ||||||||  ||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttgtcaccaaattaattgt 5200130  T
Q  266 tcaaa 270  Q
    |||||    
T  5200129 tcaaa 5200125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 6170686 - 6170813
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||| ||| |||  |||  |||||  | ||||||| |     
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaattttttttttataaattatggttgtcctaaaagttgtcaa 6170785  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  6170786 ccaaatggttgttcaaataacactcctc 6170813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 6999083 - 6998956
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| |||  |||  |||||  | ||||||| |     
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtcctaaaagttgtcaa 6998984  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||| ||||||||||||||    
T  6998983 ccaaatggttgtttaaataacactcctc 6998956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 40937079 - 40936952
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||  |||  |||||| |||| |||| |     
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataaattgtcag 40936980  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || ||||| |||||||||||||||||    
T  40936979 ctaaatggttattcaaataacactcctc 40936952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 32869892 - 32870009
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||| |||| || |||||| ||||| ||||||| ||||||||||||||  |||  |||||  | || |||| | | || |||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcccaaaaattgtcaaccaaatggtt 32869991  T
Q  264 gttcaaataacactcctc 281  Q
    ||||||||||||||||||    
T  32869992 gttcaaataacactcctc 32870009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 2221049 - 2221176
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||||||| ||||||   ||||||||| |||  |||  || ||| ||||||||| |     
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttataaattatggttatcacataagttgtcaa 2221148  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||| |  ||||||||||||||||||||    
T  2221149 caaaattattgttcaaataacactcctc 2221176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 4753231 - 4753340
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||| |||||||||||||| ||||| |||||||| |||||| || ||||||||| |||  |||  |||||||||||||||| |  ||||| ||||||     
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactac-tttttctttataaattatggttgtcaaataagttgtcattaaattagttgttt 4753329  T
Q  268 aaataacactc 278  Q
    |||||||||||    
T  4753330 aaataacactc 4753340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39213785 - 39213712
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| ||||| |||||||  |||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaa 39213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 286
Target Start/End: Original strand, 10711780 - 10711912
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||  ||||||||||||||  ||| |||||   | ||||| | |     
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgtttcaaaagttatcaa 10711879  T
Q  254 caaattggttgttcaaataacactcctcattca 286  Q
    | || | ||||||||||||||||||||| ||||    
T  10711880 ccaaatagttgttcaaataacactcctcgttca 10711912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 23352920 - 23352795
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||  ||| || |||||| ||||| |||||    |||||||||||||  |||  |||||  ||||||||| |     
T  23352920 catactcacattattttttactttatctct--attgctttggttttcgtgcaaatacatactttttctttgtaaattatggttgtcccataagttgtcaa 23352823  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  23352822 ccaaatggttgttcaaataacactcctc 23352795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 7574491 - 7574614
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||| ||||||  ||||||| ||||||  |||| ||||   | || |||| |     
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgttccaaaaattgtcaa 7574590  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || |||||||||||||||||||    
T  7574591 ccaaatggttgttcaaataacact 7574614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 9377512 - 9377633
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   |||||||||||||  ||| | ||||  ||||||||| |     
T  9377512 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaaattatgactgtctcataagttgtcaa 9377611  T
Q  254 caaattggttgttcaaataaca 275  Q
    | || |||||||||||||||||    
T  9377612 ctaaatggttgttcaaataaca 9377633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||| ||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 28245784 - 28245841
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacc 28245841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  15 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 68  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 42866806 - 42866933
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtaatatataattgtcaaataagttgt-t 251  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| |||| |||| |||||||||||||  ||| |||||||  ||||||||      
T  42866806 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccac-tttttctttgtaaattatgattgtcacgtaagttgtcg 42866904  T
Q  252 accaaattggttgttcaaataacactcctc 281  Q
    | |||| |||||||| ||||||||||||||    
T  42866905 atcaaa-tggttgttaaaataacactcctc 42866933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 11385016 - 11384908
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta-ccaaattggttgtt 266  Q
    |||||||||||||||||||||  | ||||||||||   | |||    ||||||||||||| |||| |||||||  |||||||| | ||||||||||||||    
T  11385016 tttttactttatctctctattgttttggtttccgtataattacttaatttttctttgtaaaatatgattgtcacgtaagttgtcaaccaaattggttgtt 11384917  T
Q  267 caaataaca 275  Q
    |||||||||    
T  11384916 caaataaca 11384908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 29712034 - 29712161
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||   ||| ||||||   |||||||||||||  |||  ||||||  ||||||   ||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaattatggttgtcatgtaagtttcaac 29712133  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||| ||||||||||||||||| ||||||    
T  29712134 caaa-tggttgttcaaataacagtcctca 29712161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 5054664 - 5054787
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||  |||  |||||| ||||||||| |     
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattattgttgtcacataagttgtcaa 5054763  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || | ||| |||||||||||||    
T  5054764 ccaaatagttattcaaataacact 5054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 9634451 - 9634328
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||||  |||  ||||  || ||||||| |     
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaattatggttgttcaaaaagttgtcaa 9634352  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || || ||||||||||||||||    
T  9634351 ccaaatgattgttcaaataacact 9634328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 13765456 - 13765583
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| |||||||||||||| || ||| || |||||| ||||| |||||||  ||||| |||||||  |||  |||||  | ||||||| |     
T  13765456 catactcatgttactttttactttatctttcgattgctttggttttcgtgcaaataccaactttttatttgtaaattatggttgtcccaaaagttgtcaa 13765555  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  13765556 ccaaatggttgttcaaataacactcctc 13765583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 18876923 - 18876808
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    |||||||||||||||||||||| || |||||||||||| ||||||   ||||||||| |||  |||  |||||| | |||||||  || |||||  ||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaattatggttgtcacacaagttgtcaactaaattaattgt 18876824  T
Q  266 tcaaataacactcctc 281  Q
    ||||||| ||||||||    
T  18876823 tcaaatatcactcctc 18876808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 34119667 - 34119540
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||  |||||    |||||||||||||  ||| | ||||  ||||||||| |     
T  34119667 catactcacattattttttactttatctctctattgttttgattttcgtgtgaatacttactttttctttgtaaattatgagtgtctcataagttgtcaa 34119568  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || ||||||||||||| |||||||||    
T  34119567 ccaaatggttgttcaaattacactcctc 34119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 13347830 - 13347700
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| | |||| |||| ||| |||||||  |||  |||||  | || |||| |    
T  13347830 catactcacattactttttactttatctctctattgctttggttttcgtgcaattaccaacttatttttttgtaaattatggttgtcccaaaaattgtca 13347731  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
     | || |||||||||||||||||||| ||||    
T  13347730 accaaatggttgttcaaataacactcatcat 13347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 280
Target Start/End: Original strand, 37105706 - 37105820
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    |||||||||||||||| |||||| || | |||| |||||  ||||||  |||||||||||||  |||  |||||| | ||||||| | | || | |||||    
T  37105706 attttttactttatctttctattgctttcgttttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatagttgt 37105805  T
Q  266 tcaaataacactcct 280  Q
    |||||||||||||||    
T  37105806 tcaaataacactcct 37105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 25881600 - 25881673
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| |||   ||||||  ||||||||||||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaa 25881673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35589402 - 35589329
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaa 35589329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  154 catactcactttattttttactttatctctctattact 191  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 44712004 - 44711919
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtc 239  Q
    |||||||||  |||||||||||||||||||||||| || || ||| ||||| ||||||  || ||||||| |||  ||||||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 36212074 - 36211951
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| ||||||||||||||||||| || ||| ||||| ||||     ||||||||| |||  ||| ||||||| |||| || | |     
T  36212074 catactcacattattttt-actttatctctctattactttgattttcgtgcaaatatttactttttctttataaattatgattgtcacataatttatcaa 36211976  T
Q  254 caaattggttgttcaaataacactc 278  Q
    | || ||||||||||||||||||||    
T  36211975 ccaaatggttgttcaaataacactc 36211951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 7648460 - 7648570
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgtt 266  Q
    |||||||||||||||||||||  | ||||||  |||| |||||  | |||||||||||||  ||| |||||   ||||||| |  |||||||||||||||    
T  7648460 tttttactttatctctctattgttttggtttttgtgcaaatacttc-tttttctttgtaaattatgattgttgcataagttatcaaccaaattggttgtt 7648558  T
Q  267 caaataacactc 278  Q
    ||||||||||||    
T  7648559 caaataacactc 7648570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 15269917 - 15270044
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||  |||  || ||| | ||||| | |     
T  15269917 catattcacattactttttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattatggttatcataaaagttatcaa 15270016  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || ||| |||||||||||||||||||    
T  15270017 ccaaatggatgttcaaataacactcctc 15270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 26277152 - 26277199
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgt 202  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  26277152 atactcacattattttttactttatctctctattgctttagtttccgt 26277199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 28244245 - 28244171
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtc 239  Q
    ||||||||||||||||||||||||| || || ||| |||| |||||||  ||||||||||| ||  ||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 29684595 - 29684552
Alignment:
Q  234 attgtcaaataagttgttaccaaattggttgttcaaataacact 277  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||    
T  29684595 attgtcaaataagttgtcatcaaattgattgttcaaataacact 29684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 2563774 - 2563884
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||||||||||| ||||||  | |||||| ||||| |||||||  ||||||||| |||  ||| ||||||  | ||||||| | | || || ||||||    
T  2563774 tttttactttatctttctattgttttggttttcgtgcaaataccaactttttctttataaattatgattgtcctaaaagttgtcaaccaaatgattgttc 2563873  T
Q  268 aaataacactc 278  Q
    |||||||||||    
T  2563874 aaataacactc 2563884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 4139322 - 4139272
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgc 204  Q
    ||||||||| ||| ||||||| |||||||||||||||| |||||| |||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttttcgtgc 4139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 42372535 - 42372593
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  42372535 catactcacattatttttttactttatctctctattcctttgatttccgtgcaaatacc 42372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 17999680 - 17999620
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||||||||||||| || ||| |||||||||| ||  |||||||||||||    
T  17999680 attttttattttatctctctattactttgattttcgtgccaata-catatttttctttgtaa 17999620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 18723650 - 18723707
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| |||||||||||||||||||| |||| || || ||| ||||| ||||||    
T  18723650 catactcacattattttttactttatctctttattgctttgattttcgtgcaaatacc 18723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 39449323 - 39449392
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||    
T  39449323 catactcagattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttcttt 39449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 13711368 - 13711332
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtg 203  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtg 13711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 40700251 - 40700307
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||| |||||    
T  40700251 catactcacattatatttttactttatctctctattactttgattttcgtgtcaata 40700307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 4e-51; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 29162991 - 29162861
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttgtcac 29162892  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    ||||||||||||||||||||||||| |||||    
T  29162891 caaattggttgttcaaataacactcatcatt 29162861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 32815224 - 32815351
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 32815323  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  32815324 caaattggttgttcaaataacactcctc 32815351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 39231743 - 39231615
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttgtcac 39231644  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||||| ||||||||||||||||||||||    
T  39231643 caaattagttgttcaaataacactcctca 39231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 13162975 - 13163099
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 13163074  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| |||||||||||||||||    
T  13163075 caaattgattgttcaaataacactc 13163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 37808779 - 37808652
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| ||||  |||||||||| ||||| ||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaatacgttgtcac 37808680  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  37808679 caaattggttgttcaaataacactcctc 37808652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 19786094 - 19785967
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||| |     
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcat 19785995  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  19785994 caaattgattgttcaaataacactcctc 19785967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 38779759 - 38779632
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||| |     
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcat 38779660  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||||||  | |||||||||||||||||    
T  38779659 caaattgactattcaaataacactcctc 38779632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 40353320 - 40353447
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  || ||||||||||| | ||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttttcaaataagttatcac 40353419  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | ||||| |||||||||||| |||||||    
T  40353420 ctaattgattgttcaaataatactcctc 40353447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 47078266 - 47078132
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||  | |  |||||||||||||||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaatattac-tttttctttgtaaattttggttgtcaaataagttgttac 47078168  T
Q  254 caaattggttgttcaaataacactcctcattcaatt 289  Q
     ||||||||||||||||||||||| ||| |||||||    
T  47078167 aaaattggttgttcaaataacactactctttcaatt 47078132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 41402577 - 41402694
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||| |||||||| ||||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgtcaccaaattagttgtt 41402676  T
Q  267 caaataacactcctcatt 284  Q
    ||||||||||| ||||||    
T  41402677 caaataacacttctcatt 41402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 21023132 - 21023005
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| ||||  ||||||||||| |||| |     
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaataaattgtcat 21023033  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  21023032 caaattgattgttcaaataacactcctc 21023005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 41666937 - 41666810
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||| ||||  ||||||||||| || | ||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaaataaattatcac 41666838  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  41666837 caaattggttgttcaaataacactcctc 41666810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 13906459 - 13906347
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| || | ||||||||  |||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataaattatcaccaaattaattgtt 13906360  T
Q  267 caaataacactcc 279  Q
    ||||||| |||||    
T  13906359 caaataagactcc 13906347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 29002669 - 29002785
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaat 258  Q
    |||| ||| ||||||||||||||||  | |  |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||| |||||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataagctgtcaccaaat 29002766  T
Q  259 tggttgttcaaataacact 277  Q
    |||||||||||||||||||    
T  29002767 tggttgttcaaataacact 29002785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 278
Target Start/End: Original strand, 39137209 - 39137332
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||  |||  |||||||||||||| | | |    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaagttatggttgtcaaataagttatcatc 39137308  T
Q  255 aaattggttgttcaaataacactc 278  Q
    ||||||||||||||||||||||||    
T  39137309 aaattggttgttcaaataacactc 39137332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 26041320 - 26041208
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| ||||||| ||||||||  |||  |||||||||||||||| ||||||||| ||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactacttttt-ctttgtaaattatggttgtcaaataagttgtcaccaaattgattgttc 26041222  T
Q  268 aaataacactcctc 281  Q
    |||||| |||||||    
T  26041221 aaataatactcctc 26041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 39332042 - 39332119
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 23048414 - 23048287
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||  |||| ||||||||  | |||||| | ||| ||||| ||||||| ||||||||  |||  |||| ||||||||||| ||    
T  23048414 catactcacattattttttatattatatctctattgttttggttttcatgcaaatactacttttt-ctttgtaaattatggttgtaaaataagttgtcac 23048316  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||||||||||||||||||||||||||||    
T  23048315 caaattggttgttcaaataacactcctca 23048287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 10055647 - 10055521
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  || | |||||||  |||||||||||||  |||| |||||  ||||||||| |     
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtcccataagttgtcaa 10055548  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || |||||||| |||||||||||||    
T  10055547 ccaaatggttgtttaaataacactcct 10055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 28036801 - 28036927
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| | |    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaac 28036900  T
Q  255 aaattggttgttcaaataacactcctc 281  Q
     || ||||||||||| |||||||||||    
T  28036901 caaatggttgttcaattaacactcctc 28036927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 46773648 - 46773555
Alignment:
Q  185 tattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacactc 278  Q
    |||| ||||||||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||| || |||||| ||||| |||||| ||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaaataagttgtcacgaaattgattgttgaaataagactc 46773555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 281
Target Start/End: Original strand, 39823868 - 39823991
Alignment:
Q  157 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaa 256  Q
    |||||| |||||||||||||||||| ||||||  |||  |||||||| |||||| |||||| |||||||||  |||  ||||||||||||||| ||||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactactttt-tctttgtaaattatggttgtcaaataagttgctaccaa 39823966  T
Q  257 attggttgttcaaataacactcctc 281  Q
    |||  || ||||||||||| |||||    
T  39823967 attaattattcaaataacaatcctc 39823991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 4713634 - 4713757
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaa 257  Q
    |||| |||||||||||||||||||||||||    |||||||| ||| ||||||   |||||||||||||  |||  |||||| |||||||||  ||||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaattatggttgtcacataagttgtcaaccaaa 4713733  T
Q  258 ttggttgttcaaataacactcctc 281  Q
    |||||| |||||||||||||||||    
T  4713734 ttggttattcaaataacactcctc 4713757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 13729782 - 13729909
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| ||||| ||||||| ||||||||||||||  |||  |||||  | ||||||| |     
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcccaaaagttgtcaa 13729881  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||| | ||||||||||||||    
T  13729882 ccaaatggttgctgaaataacactcctc 13729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 44495112 - 44494986
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| ||||||| |||||||| ||||||||||  ||||||||| | ||||| |||| |||  |||  |||||||||||||| | |     
T  44495112 catactcacattatttttcactttatttctctattgctatggtttcaatgccaatactaattttt-ctttataaattatggttgtcaaataagttatcat 44495014  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||||||||| ||||||||||| |||||    
T  44495013 caaattggttcttcaaataacattcctc 44494986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 27163673 - 27163554
Alignment:
Q  155 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||| ||||||||| |||||||||||  | | ||||  ||||| ||||||||||| |||||||||||||| ||||  ||||||||||| |||| ||    
T  27163673 atactcacattatttttttactttatctct--actgctattatttccatgccaataccatttttttctttgtaaaatatggttgtcaaataaattgtcac 27163576  T
Q  254 caaattggttgttcaaataaca 275  Q
    ||||||| ||||| ||||||||    
T  27163575 caaattgattgtttaaataaca 27163554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 7817693 - 7817819
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||||||| ||||||||||||||||| || || ||| ||||| |||| |||| |||||||||||||  |||  |||||| ||||||||| |    
T  7817693 catactcacattatttt-tactttatctctctattgctttgattttcgtgcaaatatccac-tttttctttgtaaattatggttgtcacataagttgtca 7817790  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
     | || |||||||||||||||||||||||    
T  7817791 accaaatggttgttcaaataacactcctc 7817819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 47495026 - 47495154
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| |||||||||||||||||||||||||  | |  |||| |||| ||||||  | |||| |||||||  ||||||| ||| |||||||||  |    
T  47495026 catactcacattattttttactttatctctctattgttttaatttctgtgcaaatacctatcttttatttgtaaattataattatcatataagttgtgaa 47495125  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    | |||||| ||||||||||||||||||||    
T  47495126 ctaaattgattgttcaaataacactcctc 47495154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 11352989 - 11352862
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||  |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaattatggttgtcccaaaagttgtcaa 11352890  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  11352889 ccaaatggttgttcaaataacactcctc 11352862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 3062387 - 3062509
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||  ||||||||||||||  |||  ||||||  |||||||| | |    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaattatggttgtcatgtaagttgtcaac 3062486  T
Q  255 aaattggttgttcaaataacact 277  Q
     || |||||||||||||||||||    
T  3062487 caaatggttgttcaaataacact 3062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 33180725 - 33180595
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||| |||||    ||| ||||| |||  ||| ||||||  ||||||||| |     
T  33180725 catactcacattattttttactttatctctctattgttttggttttcgtgcaaatacataatttctctttataaattatcattgtctcataagttgtcaa 33180626  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    | || ||||||||||||||| ||||||||||    
T  33180625 ccaaatggttgttcaaataatactcctcatt 33180595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 21822614 - 21822485
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| ||||  ||||||| ||||||||||||||  |||  ||||   | ||||||| |     
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaattatggttgttttaaaagttgtcaa 21822515  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || ||||||||||||||||||| |||||    
T  21822514 ctaaatggttgttcaaataacacttctcat 21822485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 41026132 - 41026228
Alignment:
Q  172 tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaat 271  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||             ||||||| |||| |||||||| |||||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgt-------------caaataaattgtcaccaaattagttgttcaaat 41026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 44184574 - 44184501
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaa 44184501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 46148073 - 46148165
Alignment:
Q  179 tctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaata 272  Q
    ||||||||||  |||| ||||||||||||||| | |||||||||| |||  |||  |||||||||||||||| | |||||||||||||||||||    
T  46148073 tctctctattgttatgatttccgtgccaatacta-ttttttctttataaattatggttgtcaaataagttgtcatcaaattggttgttcaaata 46148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 46532558 - 46532679
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||  ||||||   ||||||||| |||  |||  |||||| | |||||||  |    
T  46532558 catactcacattattttttactttatctctctattgttttggttttcgtgtaaatacctaatttttctttataaattatggttgtcacaaaagttgtcaa 46532657  T
Q  253 ccaaattggttgttcaaataac 274  Q
    ||||||||||||||||||||||    
T  46532658 ccaaattggttgttcaaataac 46532679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 35452588 - 35452464
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||||||| ||||||   ||||||||| |||  |||  |||||| | |||||||  |    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaattatggttgtcacacaagttgtcaa 35452489  T
Q  253 ccaaattggttgttcaaataacact 277  Q
    ||| |||| ||||||||||||||||    
T  35452488 ccagattgattgttcaaataacact 35452464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35588901 - 35588821
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtc 239  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||  ||||||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 43573558 - 43573431
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| |||  |||  |||||  | || |||| |     
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtctcaaaaattgtcaa 43573459  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || || ||||||||||||||||||||    
T  43573458 ccaaatgattgttcaaataacactcctc 43573431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 36019473 - 36019591
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||| ||| |||||||    ||||||||||||  |||  |||||||||||||||        
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaaataagttg---- 36019567  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
        ||||||||||||||||||||||||    
T  36019568 ----ttggttgttcaaataacactcctc 36019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 41893971 - 41894101
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||| ||  | |||||| |||||  ||||||  |||| ||||||||  |||  |||||| | || |||| |     
T  41893971 catactcacattactttttactttatctctctgttgttttggttttcgtgcatataccaacttttcctttgtaaattatggttgtcacaaaaattgtcaa 41894070  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    | || ||||||||||||||||||||||||||    
T  41894071 ctaaatggttgttcaaataacactcctcatt 41894101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 16980354 - 16980468
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| || || ||||||| ||||||||||||||  ||| ||||||  | ||||||| | |    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaaattatgattgtctcaaaagttgtcaac 16980452  T
Q  255 aaattggttgttcaaa 270  Q
     || ||||||||||||    
T  16980453 taaatggttgttcaaa 16980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 11564949 - 11565018
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  11564949 catactcacattattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 11565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 18111627 - 18111553
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  ||||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaa 18111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 20482583 - 20482617
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    |||||||||||||||||||||||||||||||||||    
T  20482583 catactcactttattttttactttatctctctatt 20482617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 21559854 - 21559911
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  21559854 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacc 21559911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 41399178 - 41399049
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  |||||||||||||||||||||||||  | |||||| ||||  |||||   ||||||||||||||  | |  ||||||||||| || | |     
T  41399178 catactcatattattttttactttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaaattttggttgtcaaataaattataaa 41399079  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
      || |||||||| ||||||||||||||||    
T  41399078 ttaaatggttgtttaaataacactcctcat 41399049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 46829549 - 46829653
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||| ||| |||  |||||||||||||||| || |||| |||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaaataagttgtctatcaaa-tggttgt 46829647  T
Q  266 tcaaat 271  Q
    ||||||    
T  46829648 tcaaat 46829653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 12645920 - 12645852
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaa 12645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 41018719 - 41018842
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgtt 251  Q
    ||||||||| |||| |||||||||| ||||||||||||| ||||||  |||  |||||| | ||||||||||| ||| ||| ||||||| | |||||||     
T  41018719 catactcacattatatttttactttctctctctattactttggtttttgtgttaatacctc-tttttctttgtaaatttatgattgtcataaaagttgtc 41018817  T
Q  252 accaaattggttgttcaaataacac 276  Q
    ||| || | ||| ||||||||||||    
T  41018818 acctaaatagttattcaaataacac 41018842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 276
Target Start/End: Complemental strand, 6109970 - 6109863
Alignment:
Q  170 tttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgttaccaaattggttgttca 268  Q
    |||||||||||||||||||  | |||||| |||| ||||||    ||||||||||| ||| ||| |||||| |||||||||| | |||| || |||||||    
T  6109970 tttactttatctctctattgttttggttttcgtgtcaatacataatttttctttgtaaatctatgattgtccaataagttgtcaacaaaatgattgttca 6109871  T
Q  269 aataacac 276  Q
    ||| ||||    
T  6109870 aatcacac 6109863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 41458652 - 41458779
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||| ||| ||||  | || |||  |||| ||||||   ||||||||| |||  |||  ||||||  |||||||| |     
T  41458652 catactcacattattttttactttatttctatattgttttgatttttgtgcaaatacctactttttctttataaattatggttgtcatgtaagttgtcaa 41458751  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  41458752 ccaaatggttgttcaaataacactcctc 41458779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 31844619 - 31844533
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaa 241  Q
    |||||||| |||||||||||||||||||||||||  | ||||||  || | ||||||   |||||||||||||  |||| |||||||    
T  31844619 atactcacattattttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtcaa 31844533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 34757387 - 34757357
Alignment:
Q  252 accaaattggttgttcaaataacactcctca 282  Q
    |||||||||||||||||||||||||||||||    
T  34757387 accaaattggttgttcaaataacactcctca 34757357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 35600727 - 35600777
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  35600727 catactcacattatttttttactttttctctctattactttggtttccgtg 35600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 39029914 - 39029988
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| | |||||||||   |||||| |||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgtaa 39029988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 3343345 - 3343276
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||| |||  |||||||||    
T  3343345 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatcccaactttttcttt 3343276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 25067289 - 25067402
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||||||||  | |||||| | ||| |||||   ||||||||||||||  |||  || ||| |||| |||| | | || |||||    
T  25067289 ttattttttactttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaattatggttatcatataaattgtcaaccaaatggtt 25067388  T
Q  264 gttcaaataacact 277  Q
    ||| ||||||||||    
T  25067389 gtttaaataacact 25067402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 46653089 - 46653040
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttt 216  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||| |||||    
T  46653089 ttttttattttatctctttattgctatggtttccgtgtcaatactacttt 46653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 4225823 - 4225931
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaata-tataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||  | |||||| |||| |||||||   ||||||||| ||| | |||  |||||||||||||||| ||| ||    ||||||    
T  4225823 ttttactttatctctctattgttttggttttcgtgtcaatacctactttttctttataaaactatggttgtcaaataagttgtcacctaaaaaattgttc 4225922  T
Q  268 aaataacac 276  Q
    |||||||||    
T  4225923 aaataacac 4225931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 46725676 - 46725784
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||| ||||||| |||||||| || |||||    |||||||||||| ||| || | |||||  ||||||||| | |||| | ||| |||    
T  46725676 ttttactttatctctttattactttggtttccttgtcaatatttattttttctttgtaaatctaaagttgtctcataagttgtcaacaaaatagttattc 46725775  T
Q  268 aaataacac 276  Q
    |||||||||    
T  46725776 aaataacac 46725784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 41486158 - 41486031
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 41486059  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  41486058 caaattggttgttcaaataacactcctc 41486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 30079902 - 30080030
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |||  |||||||||||||| | ||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttttcac 30080001  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||||||||||||||||||||||||||||    
T  30080002 caaattggttgttcaaataacactcctca 30080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 14451449 - 14451579
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 14451548  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||||||||||||||||||||||||||||    
T  14451549 caaattggttgttcaaataacactcctcatt 14451579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 21260354 - 21260483
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |||| ||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaataaattgtcac 21260453  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    ||||||||||||||||| ||||||||||||    
T  21260454 caaattggttgttcaaaaaacactcctcat 21260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 33899341 - 33899213
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||| ||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcac 33899242  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||||||||||||||||||||||| ||||    
T  33899241 caaattggttgttcaaataacacttctca 33899213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 51746277 - 51746405
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||| |||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgtcacc 51746376  T
Q  255 aaattggttgttcaaataacactcctcat 283  Q
    |||||  ||||||||||||||||||||||    
T  51746377 aaattaattgttcaaataacactcctcat 51746405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 5932172 - 5932046
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||| ||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcac 5932074  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  5932073 caaattggttgttcaaataacactcctc 5932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 9118879 - 9118752
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||| ||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcac 9118780  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  9118779 caaattggttgttcaaataacactcctc 9118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 42959328 - 42959455
Alignment:
Q  155 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| | ||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttatcac 42959427  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
     |||||||||||||||||||||||||||    
T  42959428 taaattggttgttcaaataacactcctc 42959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 6141793 - 6141666
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| | |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaaataaatagtcac 6141694  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
     |||||||||||||||||||||||||||    
T  6141693 taaattggttgttcaaataacactcctc 6141666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 51194325 - 51194452
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | | |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||| |     
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcat 51194424  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  51194425 caaattggttgttcaaataacactcctc 51194452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 53152326 - 53152207
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggtt 53152227  T
Q  264 gttcaaataacactcctcat 283  Q
    ||||||||||||||||||||    
T  53152226 gttcaaataacactcctcat 53152207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 12112693 - 12112810
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggtt 12112792  T
Q  264 gttcaaataacactcctc 281  Q
    ||||||||| ||||||||    
T  12112793 gttcaaatatcactcctc 12112810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 624327 - 624203
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || ||||  |||||||||||||||| |    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaaatatggttgtcaaataagttgtca 624228  T
Q  253 ccaaattggttgttcaaataacact 277  Q
    ||||||| |||||||||||||||||    
T  624227 ccaaattagttgttcaaataacact 624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 47965795 - 47965920
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 47965892  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  47965893 caaattggttgttcaaataacactcctc 47965920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 50273063 - 50272960
Alignment:
Q  179 tctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacactc 278  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||| ||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataatactc 50272964  T
Q  279 ctca 282  Q
    ||||    
T  50272963 ctca 50272960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 17475946 - 17476062
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||  ||| ||||||||||||||||| ||||||||| |||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactactttt-tctttgtaaattatgattgtcaaataagttgtcaccaaattgattgtt 17476044  T
Q  267 caaataacactcctcatt 284  Q
    ||||||||||||||||||    
T  17476045 caaataacactcctcatt 17476062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 25318080 - 25317957
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| | ||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttatcac 25317982  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  25317981 caaattggttgttcaaataacactc 25317957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 31076110 - 31076232
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||  |||  |||||||||||||||| ||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttgtcac 31076208  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||||||||| ||||||||||    
T  31076209 caaattggttgtttaaataacact 31076232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 36111411 - 36111304
Alignment:
Q  154 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtca 36111312  T
Q  253 ccaaattg 260  Q
    ||||||||    
T  36111311 ccaaattg 36111304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 37066044 - 37066170
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| || |||||||| ||||  | | ||||||||||||||||| ||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactac-tttttcttagtaaattttgattgtcaaataagttgtcac 37066142  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  37066143 caaattggttgttcaaataacactcctc 37066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 26206992 - 26206868
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||| |||||||||||||||||||||  ||||||||| ||| || |||||||||||||||||||| ||||  |||||||||||||||| ||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaaataagttgtcac 26206893  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||| ||||||||||||||||||    
T  26206892 caaattagttgttcaaataacactc 26206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 41082374 - 41082497
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||| |||||| |||||||||  ||||||||||||||||||||  |     
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactactttt-tctttgtaaattataattgtcaaataagttgccat 41082472  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  41082473 caaattggttgttcaaataacactc 41082497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 35820241 - 35820354
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||  |||| |||||||||||||| | ||||||||  ||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaaataagttatcaccaaattaattgttc 35820340  T
Q  268 aaataacactcctc 281  Q
    ||||||||||||||    
T  35820341 aaataacactcctc 35820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 54669598 - 54669472
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||| |||||||||||||||| ||| |||||||||| |||||| ||||||| ||||||||  |||  |||||||||||||||| |     
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactacttttt-ctttgtaaattatggttgtcaaataagttgtcat 54669500  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  54669499 caaattggttgttcaaataacactcctc 54669472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 439275 - 439152
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||| || ||||| ||||| ||||| | | |||||||||||||||||||||| ||||  ||||||||||| || | ||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatatggttgtcaaataaattatcac 439176  T
Q  254 caaattggttgttcaaataacact 277  Q
    |||||| |||||||||||||||||    
T  439175 caaattagttgttcaaataacact 439152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 2256333 - 2256219
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    ||||||||||||||||||||||| ||||| |||||||  |||||| |||||||  |||||||  ||| ||||| ||||||||||| |||||||| |||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactactttttg-tttgtaaattatgattgtaaaataagttgtcaccaaattagttgt 2256235  T
Q  266 tcaaataacactcctc 281  Q
    ||||||||||||||||    
T  2256234 tcaaataacactcctc 2256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 23822250 - 23822136
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    ||||||||||||||||||||  |||  | ||||||||||||||||| ||||||||||||  ||| ||||  |||||||||||||||| ||||||||||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttctta-taaaatatggttgtcaaataagttgtcaccaaattggtt 23822154  T
Q  264 gttcaaataacactcctc 281  Q
    ||||||||||||| ||||    
T  23822153 gttcaaataacacccctc 23822136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 48536366 - 48536477
Alignment:
Q  168 tttttactttatctc--tctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||| | |||||||||||||  |||| |||||||||||| || | |||||||| |||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaaataaattatcaccaaattagttgt 48536465  T
Q  266 tcaaataacact 277  Q
    ||||||||||||    
T  48536466 tcaaataacact 48536477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 39344995 - 39344868
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||||  ||| ||||||  | ||||| | |     
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtctcaaaagttatcaa 39344896  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  39344895 ccaaatggttgttcaaataacactcctc 39344868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 28657456 - 28657327
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||    ||||||||||||  |||  |||||| | |||||||  |    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaattatggttgtcaca-aagttgtcaa 28657358  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
    ||||||| ||||||||||||||||| |||||    
T  28657357 ccaaattcgttgttcaaataacacttctcat 28657327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 13389453 - 13389342
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccact--tttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    ||||||||||||||||||||| ||||| |||||||  |||||  |||  ||||||||| |||  |||  |||||||||||||||| ||||||||| ||||    
T  13389453 tttttactttatctctctattgctatgatttccgtatcaataatactattttttctttataaattatggttgtcaaataagttgtgaccaaattgattgt 13389354  T
Q  266 tcaaataacact 277  Q
    ||||||||||||    
T  13389353 tcaaataacact 13389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 43326350 - 43326230
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaat-accac-ttttttctttgtaatatataattgtcaaataagttgttaccaaattgg 261  Q
    ||||||||||||||||||||||||| ||||  ||||| |  |||| || || |||||| |||||||  ||||||||||||||||||| | |||||||||     
T  43326350 ttattttttactttatctctctattgctataatttccatatcaataactactttttttttttgtaaattataattgtcaaataagttatcaccaaattgt 43326251  T
Q  262 ttgttcaaataacactcctca 282  Q
    || ||||||||||||||||||    
T  43326250 ttattcaaataacactcctca 43326230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 41389887 - 41389759
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||||||||| ||||||| || |||| ||||| |||  |||||||||| ||||||| ||||||||  |||  |||| |||||||| || ||    
T  41389887 catactcaaattatttttttctttatcactttattgctatgatttttgtgccaatactacttttt-ctttgtaaattatggttgtaaaataagtagtcac 41389789  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
     ||||||||||||||||||||||| |||||    
T  41389788 gaaattggttgttcaaataacacttctcat 41389759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 2999168 - 2999295
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaa 2999267  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
      || |||||||||||||||||||||||    
T  2999268 ttaaatggttgttcaaataacactcctc 2999295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 22819705 - 22819832
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 22819804  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  22819805 ccaaatggttgttcaaataacactcctc 22819832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 33860716 - 33860832
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgtt 266  Q
    |||||||||||||||||||||  | |||||||||||| |||||    |||||||||||||  |||  ||||||  ||||||||  | |||||||||||||    
T  33860716 tttttactttatctctctattgttttggtttccgtgcaaatacttactttttctttgtaaattatcgttgtcacgtaagttgtcaatcaaattggttgtt 33860815  T
Q  267 caaataacactcctcat 283  Q
    ||||||| |||||||||    
T  33860816 caaataatactcctcat 33860832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 26718424 - 26718550
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||  ||| ||||||  | || || | |     
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtcccaaaaattatcaa 26718523  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || ||||| ||||||||||||||||    
T  26718524 ccaaatggttattcaaataacactcct 26718550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 26731052 - 26731178
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||  ||| ||||||  | || || | |     
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtcccaaaaattatcaa 26731151  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || ||||| ||||||||||||||||    
T  26731152 ccaaatggttattcaaataacactcct 26731178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 47099078 - 47099205
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||  ||||| ||||| | | ||||||||||||  |||  |||||  | ||||| | |     
T  47099078 catactcacattactttttactttatctctctattgctttggtt--cgtgcaaatactaatattttctttgtaaattatggttgtcccaaaagttatcaa 47099175  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || |||||||||||||||||||||||||    
T  47099176 ccaaatggttgttcaaataacactcctcat 47099205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 12799784 - 12799897
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||| ||||| |||||| | || || ||| ||||  ||||||  ||||||||||||||  ||| ||||||| ||||||||||| | || |||||||||    
T  12799784 tttttattttatttctctaatgctttgattttcgtgtaaatacctattttttctttgtaaattatgattgtcacataagttgttaaccaaatggttgttc 12799883  T
Q  268 aaataacactcctc 281  Q
    |||||||| |||||    
T  12799884 aaataacattcctc 12799897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 14010133 - 14010064
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| ||||| ||||||| ||||||||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttcttt 14010064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 28458392 - 28458319
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaa 28458319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 30170035 - 30169970
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| | | ||||||| ||| ||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttttcataccaatactactctttt 30169970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 46405989 - 46405916
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 46405916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 49896681 - 49896608
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||||  |||||||||||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaa 49896608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 13086078 - 13086206
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||| |||     
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttattaa 13086177  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
      ||  |||||||||||||||||||||||    
T  13086178 tcaaacggttgttcaaataacactcctca 13086206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 38715303 - 38715427
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| | |||||||| ||| |||||||||| || |||||||||||| |||| |    |||||||| |||  |||| |||||| | |||||||  |    
T  38715303 catactcacataattttttattttttctctctattgctttggtttccgtgcaaataactaccttttctttataaattatagttgtcacacaagttgtcaa 38715402  T
Q  253 ccaaattggttgttcaaataacact 277  Q
    |||||||| ||||||||||||||||    
T  38715403 ccaaattgattgttcaaataacact 38715427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 43769767 - 43769895
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||| ||||  | |  ||| ||||| ||||||   |||||||||||||  |||  |||||  ||||||| | |     
T  43769767 catactcacattattttttactttatctctttattgttttaattttcgtgcaaatacccactttttctttgtaaattatggttgtcgcataagttatcaa 43769866  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    |||| | ||||||||||||||||||||||    
T  43769867 caaaatagttgttcaaataacactcctca 43769895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 54802676 - 54802568
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaata-tataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||||||||||||||||| || |  ||| |||| |||||||  |||||||||| ||| | |||| |||||||||||||||| ||| ||   |||||||    
T  54802676 ttttactttatctctctattgctttaattttcgtgtcaatacctattttttctttataaaactatagttgtcaaataagttgtcacccaaaaagttgttc 54802577  T
Q  268 aaataacac 276  Q
    |||||||||    
T  54802576 aaataacac 54802568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 55601716 - 55601600
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||       ||||| ||||||| ||||||||  | |  |||||||||||||||| ||    
T  55601716 catactcacattatattttactatatctctctattgctatggtttt------aatactacttttt-ctttgtaaattttggttgtcaaataagttgtcac 55601624  T
Q  254 caaattggttgttcaaataacact 277  Q
     |||||| ||||||||||||||||    
T  55601623 aaaattgattgttcaaataacact 55601600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 27326765 - 27326694
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| ||||| |||||||  |||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgtaa 27326694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 13139204 - 13139329
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| ||||| |||||||  |||||||||||||  |||| ||||| || || || | |     
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtccaa-aaattatcaa 13139302  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || ||||||||||||||||||||||    
T  13139303 ccaaatggttgttcaaataacactcct 13139329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 42815474 - 42815591
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa-tatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| ||||| || |||   |||| |||||||| | |||  |||||||||||||||| || ||||| ||||||    
T  42815474 tttttactttatctctctattgctttgattttcgtgcaaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaat-ggttgt 42815572  T
Q  266 tcaaataacactcctcatt 284  Q
    ||||||||||| |||||||    
T  42815573 tcaaataacacacctcatt 42815591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 48335610 - 48335688
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||| ||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 48335688  T

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Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

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Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 13263411 - 13263378
Alignment:
Q  155 atactcactttattttttactttatctctctatt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  13263411 atactcactttattttttactttatctctctatt 13263378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31657702 - 31657775
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  |||||||  ||||||| |||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaa 31657775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 18882990 - 18882867
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||||  || ||||||||||||||||||||| || || ||| ||| | ||||||  ||||||||||||||  ||| ||| |   | ||||||| |     
T  18882990 catactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaaattatgatttttccaaaagttgtcaa 18882891  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || |||||||||||||||||||    
T  18882890 ccaaatggttgttcaaataacact 18882867  T

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Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 45143686 - 45143562
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  45143686 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 45143589  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || | ||||||||||||||| ||||    
T  45143588 ccaaatagttgttcaaataacaatcct 45143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 45152455 - 45152331
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  45152455 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 45152358  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || | ||||||||||||||| ||||    
T  45152357 ccaaatagttgttcaaataacaatcct 45152331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 53647427 - 53647316
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    |||||||||||||||||||||| || || |||||||   ||||||  | |||||||| |||  |||  |||||| |||||||||  ||||||||| ||||    
T  53647427 ttttttactttatctctctattgctttgatttccgtataaatacctatcttttctttataaattatggttgtcacataagttgtcaaccaaattgattgt 53647328  T
Q  266 tcaaataacact 277  Q
    ||||||| ||||    
T  53647327 tcaaatatcact 53647316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 6494898 - 6494852
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtcaatac 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 12138922 - 12139036
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||||||||||||||| || |||  |||| ||||||   |||||||||||||  |||  |||| | ||||||| | |   || ||||||||    
T  12138922 ttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaaattatggttgttacataagttatcaatcaaatggttgtt 12139021  T
Q  267 caaataacactcctc 281  Q
    ||||||||| |||||    
T  12139022 caaataacattcctc 12139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 42667275 - 42667389
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgtt 266  Q
    |||||||||||||||||||||  | |||||||||||  |||||    ||||||||| |||  |||  |||||  |||||||||  ||||||||| |||||    
T  42667275 tttttactttatctctctattgttttggtttccgtgtaaatacttactttttctttataaattatggttgtcgcataagttgtcaaccaaattgattgtt 42667374  T
Q  267 caaataacactcctc 281  Q
     ||||||||||||||    
T  42667375 taaataacactcctc 42667389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 45851816 - 45851885
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | |||||||||||||||||| ||||||| || ||| |||| |||||||  |||||||||||    
T  45851816 catactcacatcattttttactttatctctttattactttgattttcgtg-caatacctattttttctttg 45851885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 53405845 - 53405719
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata-ccacttttttctttgtaatatataattgtcaaataagttgtt- 251  Q
    ||||||||| | ||||||||| ||||||||||||| || || |||| || | |||| | | ||||||||||||||  |||| ||||   ||||||| ||     
T  53405845 catactcacataattttttacattatctctctattgctttgatttctgtacaaatatctatttttttctttgtaaattatagttgttgcataagttatta 53405746  T
Q  252 accaaattggttgttcaaataacactc 278  Q
    |||| |||||| |||||||||||||||    
T  53405745 accatattggtggttcaaataacactc 53405719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 34995377 - 34995434
Alignment:
Q  155 atactcactttat-tttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||| |||||||    
T  34995377 atactcaccttatgtttttactttcactctctattactttggtttccgtgtcaatacc 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 37514133 - 37514025
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||| ||| |||  ||||||||||| || | || |||| |||||||    
T  37514133 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaaataaattctctatcaaa-tggttgt 37514035  T
Q  266 tcaaataaca 275  Q
    ||||||||||    
T  37514034 tcaaataaca 37514025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 38338937 - 38338868
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  38338937 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttcttt 38338868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 40609769 - 40609798
Alignment:
Q  252 accaaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||||    
T  40609769 accaaattggttgttcaaataacactcctc 40609798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 56271430 - 56271539
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||| |||||||||||||| || |||||| ||||| ||||||   |||||||||||||  |||  |||||| | ||||||| |   || ||| |||||    
T  56271430 tttttattttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttgtcaaacaaatggatgttc 56271529  T
Q  268 aaataacact 277  Q
    ||||||||||    
T  56271530 aaataacact 56271539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 6494567 - 6494535
Alignment:
Q  246 gttgttaccaaattggttgttcaaataacactc 278  Q
    ||||| |||||||||||||||||||||||||||    
T  6494567 gttgtcaccaaattggttgttcaaataacactc 6494535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 49768332 - 49768276
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  49768332 atactcatattattttttactttatctctctattgctttgattttcgtgcaaatacc 49768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 44677499 - 44677372
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 44677400  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  44677399 caaattggttgttcaaataacactcctc 44677372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 37508513 - 37508384
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |     
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcat 37508414  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    ||||||||||||||||||||||||||||||    
T  37508413 caaattggttgttcaaataacactcctcat 37508384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 10206988 - 10206861
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 10206889  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  10206888 caaattggttgttcaaataacactcctc 10206861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 390865 - 390993
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| |     
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttgtcat 390964  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    ||| |||||||||||||||||| ||||||    
T  390965 caacttggttgttcaaataacattcctca 390993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 28419229 - 28419105
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||  ||||||| |||||||| ||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttgtcac 28419130  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  28419129 caaattggttgttcaaataacactc 28419105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 32767732 - 32767856
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||  |||  |||||||||||||||| ||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttgtcac 32767831  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| |||||||||||||||||    
T  32767832 caaattgattgttcaaataacactc 32767856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 155 - 286
Target Start/End: Original strand, 36121878 - 36122009
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttgtcacc 36121977  T
Q  255 aaattggttgttcaaataacactcctcattca 286  Q
    ||||||||||||||||||||||||||| ||||    
T  36121978 aaattggttgttcaaataacactcctctttca 36122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 39671112 - 39670985
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||||| ||||  |||||||||||||||| ||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcac 39671013  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  39671012 caaattggttgttcaaataacactcctc 39670985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 39020174 - 39020052
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtc-aaataagttgtta 252  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||| |    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaaataagttgtca 39020075  T
Q  253 ccaaattggttgttcaaataaca 275  Q
     ||||||||||||||||||||||    
T  39020074 tcaaattggttgttcaaataaca 39020052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 287
Target Start/End: Original strand, 54195396 - 54195529
Alignment:
Q  155 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||  |||  |||||||||||||||| ||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttgtcac 54195495  T
Q  254 caaattggttgttcaaataacactcctcattcaa 287  Q
    ||||||||||||||||||||||||||||| ||||    
T  54195496 caaattggttgttcaaataacactcctcaatcaa 54195529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 33375916 - 33376048
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa-----tatataattgtcaaataagtt 248  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||     | ||||||| |||||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaaagtactgtataattttcaaataagtt 33376015  T
Q  249 gttaccaaattggttgttcaaataacactcctc 281  Q
    || ||||||||| ||||||||||||||||||||    
T  33376016 gtcaccaaattgattgttcaaataacactcctc 33376048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 11633669 - 11633796
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||  ||||||||||| || | ||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaaataaattatcac 11633768  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  11633769 caaattggttgttcaaataacactcctc 11633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 43905029 - 43905156
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||| | ||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttttcac 43905128  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
     |||||||||||||||||||||||||||    
T  43905129 taaattggttgttcaaataacactcctc 43905156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 22371247 - 22371377
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||   ||| |||||||||||| |||| ||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaaataaattgtcac 22371346  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||| ||||||||||||||||||||||||    
T  22371347 caaattagttgttcaaataacactcctcatt 22371377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 30909090 - 30909204
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaat 258  Q
    |||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaataagttgtcaccaaat 30909189  T
Q  259 tggttgttcaaataa 273  Q
    | |||||||||||||    
T  30909190 tagttgttcaaataa 30909204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 49363266 - 49363143
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| || |  |    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaaataaattatccc 49363167  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||| ||||||||||||||||    
T  49363166 caaattgattgttcaaataacact 49363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 54773755 - 54773641
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||| |||||||||||| ||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttatt 54773656  T
Q  267 caaataacactcctc 281  Q
    || ||||||||||||    
T  54773655 catataacactcctc 54773641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 54027998 - 54028128
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||  |||  ||||| |||||||||| ||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtccaataagttgtcac 54028097  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
     |||||| || ||||||||||||||||||||    
T  54028098 taaattgattcttcaaataacactcctcatt 54028128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 55013079 - 55013181
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataac 274  Q
    ||||||||| |||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaataaattgtcaccaaattggttgttcaaataac 55013178  T
Q  275 act 277  Q
    |||    
T  55013179 act 55013181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 29634077 - 29633960
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    ||||||||||| |||||||||||||  |||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||| |||| || |||||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaaataaattgtcactaaattggtt 29633978  T
Q  264 gttcaaataacactcctc 281  Q
    ||||||||||||| ||||    
T  29633977 gttcaaataacacccctc 29633960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 46982918 - 46982794
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| ||| |||||||| |||||||| ||||  ||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||| ||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaaataaattgtcac 46982819  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||| ||||||||||||||||||    
T  46982818 caaattagttgttcaaataacactc 46982794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 49417631 - 49417753
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||  | |  |||| ||||||||||| ||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattttggttgttaaataagttgtcac 49417729  T
Q  254 caaattggttgttcaaataacact 277  Q
     |||||||||||||||||||||||    
T  49417730 aaaattggttgttcaaataacact 49417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 26996372 - 26996500
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt-ctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||| |||||||| |||||| |  ||||| ||||  ||||||||||| |||| |    
T  26996372 catactcacattattttttactttatctct--attgctatggtttccgtgtcaataccattttttttcaatgtaaaatatggttgtcaaataaattgtca 26996469  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
    ||||||| |||||||||||||||||||||||    
T  26996470 ccaaatttgttgttcaaataacactcctcat 26996500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 35201531 - 35201428
Alignment:
Q  177 tatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacac 276  Q
    |||||||||||| ||||||||| |||| |||||| ||||||| ||||||||  ||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactacttttt-ctttgtaaattatgattgtcaaataagttgtcaccaaattgattgttcaaataacac 35201433  T
Q  277 tcctc 281  Q
    |||||    
T  35201432 tcctc 35201428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 51973383 - 51973253
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||| ||||||||||||||||  ||||||||   || |||||| | ||||||||||||||  |||  ||||||||||| |||| ||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaaataaattgtcac 51973284  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||| ||||||||||||||||||||||||    
T  51973283 caaattagttgttcaaataacactcctcatt 51973253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 8821686 - 8821759
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgtaa 8821759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 21195891 - 21195779
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| || |||| |||| |||  |||| ||||||||||| |||||| ||||||| ||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactac-ttttcctttataaattatagttgtcaaataaattgttatcaaattgattgttc 21195793  T
Q  268 aaataacactcctc 281  Q
    |||||| |||||||    
T  21195792 aaataatactcctc 21195779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 37927220 - 37927092
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| | ||||||  |||||||||| |||  |||  |||||| | |||||||  |    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttctttataaattatggttgtcacacaagttgtcaa 37927121  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
     ||||||||||||||||||||||||||||    
T  37927120 tcaaattggttgttcaaataacactcctc 37927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 13934607 - 13934497
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||  || |||||||||||||  |||  || |||||||| |||| | ||||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaataatac-tttttctttgtaaattatggttatcaaataaattgtcatcaaattggtt 13934509  T
Q  264 gttcaaataaca 275  Q
    ||||||||||||    
T  13934508 gttcaaataaca 13934497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 55400055 - 55400182
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| |||  |||  |||||  | ||||||| |     
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtcctaaaagttgtcaa 55400154  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  55400155 ccaaatggttgttcaaataacactcctc 55400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 24095421 - 24095292
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| ||||||   |||||||||||||  |||  |||||| | ||||||| |     
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttgtcaa 24095322  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || ||| |||||||||||||||||||||    
T  24095321 ccaaatggatgttcaaataacactcctcat 24095292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 49761363 - 49761491
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  |||| ||||||   ||||||||| |||  ||| |||||||  |||||||| |     
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtcatgtaagttgtcaa 49761462  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    | || || |||||||||||||||||||||    
T  49761463 ctaaatgattgttcaaataacactcctca 49761491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 24482978 - 24482851
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaagttatggttgtcccaaaagttgtaaa 24482879  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  24482878 ccaaatggttgttcaaataacactcctc 24482851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 51465929 - 51465802
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 51465830  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  51465829 ccaaatggttgttcaaataacactcctc 51465802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39697237 - 39697164
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| || ||||||||||||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaa 39697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39907561 - 39907488
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||| || |||||||| |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaa 39907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 49167821 - 49167933
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||| ||||| |  |||||| ||||||| |||| |||  |||  || ||||||||||||| | ||||||||||| ||    
T  49167821 tttttactttatctctctattgctatgatttccatatcaatactacttttt-ctttataaattatggttatcaaataagttgtcatcaaattggttgatc 49167919  T
Q  268 aaataacactcctc 281  Q
    |||||||| |||||    
T  49167920 aaataacattcctc 49167933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 52937239 - 52937312
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||| ||||||||||||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaa 52937312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 21196180 - 21196308
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||||||||||||||||||||||| || ||| ||||| |||||   ||||||||||||||  ||| ||| ||  |||| |||| |     
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaaattatgattatcccataaattgtcaa 21196279  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
      || ||||||||||||||||||| ||||    
T  21196280 tcaaatggttgttcaaataacacttctca 21196308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 46253678 - 46253751
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||   ||||||||||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaa 46253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 3281730 - 3281602
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||| |||||||||||||||| |||| || ||||||  ||   ||||||  ||||||||||||||  |||  ||||||  |||||||  | |    
T  3281730 atactcacattactttttactttatctctttattgctttggtttttgtataaatacctattttttctttgtaaattatggttgtcatgtaagttgacaac 3281631  T
Q  255 aaattggttgttcaaataacactcctcat 283  Q
     || |||||||||||||||||||||||||    
T  3281630 caaatggttgttcaaataacactcctcat 3281602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 8846547 - 8846671
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| ||||||||||||||||||||| |||  | ||||||| || | |||||   |||||||||| |||  ||| ||| ||| |||||||||  |    
T  8846547 catactcacattattttttactttatctctccattgttttggtttctgtacaaatacttattttttctttataaattatgattatcatataagttgtcaa 8846646  T
Q  253 ccaaattggttgttcaaataacact 277  Q
    |||||||| ||||| ||||||||||    
T  8846647 ccaaattgattgttgaaataacact 8846671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 24645412 - 24645531
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||  ||||||||||||||  |||  |||||| | ||||||| |     
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaattatggttgtcataaaagttgtcaa 24645511  T
Q  254 caaattggttgttcaaataa 273  Q
    | || ||| |||||||||||    
T  24645512 ccaagtggatgttcaaataa 24645531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 46019518 - 46019641
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||| | ||||||  | ||||||||||||  |||  ||||   | ||||||| |     
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaaattatggttgttccaaaagttgtcaa 46019617  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || |||||||||||||||||||    
T  46019618 ccaaatggttgttcaaataacact 46019641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 46852147 - 46852020
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| |||||||||||| | ||||||  | |||||| ||||| |||| ||  |||||||||||||  ||| ||||||  | ||||||| |     
T  46852147 catactcatattactttttactttatttgtctattgttttggttttcgtgcaaatatcaactttttctttgtaaattatgattgtcccaaaagttgtcaa 46852048  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  46852047 ccaaatggttgttcaaataacactcctc 46852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 50206985 - 50206858
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||||  |||  |||||  | ||||||| |     
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaattatggttgtcctaaaagttgtcaa 50206886  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || | |||||| ||||||||||||||    
T  50206885 ctaaatagttgtttaaataacactcctc 50206858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 6999239 - 6999353
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||| |||||||| || || ||| ||||| |||||   ||||||| ||||||  |||  |||||  ||||||||| | | || ||||||||    
T  6999239 ttttttactttatttctctattgctttgattttcgtgcaaatacatattttttcattgtaaattatggttgtcccataagttgtcaaccaaatggttgtt 6999338  T
Q  267 caaataacactcctc 281  Q
    |||||||||||||||    
T  6999339 caaataacactcctc 6999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 9158874 - 9158760
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta-ccaaattggttgtt 266  Q
    |||||||||||||| ||||||  | |||||||| ||  |||||    |||||||||||||  |||  |||||| ||||||||| | ||||||| ||||||    
T  9158874 tttttactttatctatctattgttttggtttccatgtaaatacttactttttctttgtaaattatggttgtcacataagttgtcaaccaaattagttgtt 9158775  T
Q  267 caaataacactcctc 281  Q
    |||||||||||||||    
T  9158774 caaataacactcctc 9158760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 24480463 - 24480393
Alignment:
Q  157 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  |||| ||||||   |||||||||||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaa 24480393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 37035541 - 37035491
Alignment:
Q  154 catactcactttatttttt-actttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttccgtg 37035491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 20080129 - 20080253
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||   ||||||||| |||  |||  |||||| | || || |  |    
T  20080129 catactcacattatttt-tactttatctctctattgttttggtttccgtgcaaatacctactttttctttataaattatggttgtcacaaaaattatcaa 20080227  T
Q  253 ccaaattggttgttcaaataacactc 278  Q
    |||||||||||||||||| |||||||    
T  20080228 ccaaattggttgttcaaaaaacactc 20080253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 36412179 - 36412310
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta- 252  Q
    |||| |||| ||||| |||||||||| |||||||| || || ||| ||||| |||||   || |||||||||||  |||  |||||  ||||||||| |     
T  36412179 cataatcacattattatttactttatttctctattgctttgattttcgtgcaaatacatattctttctttgtaaattatggttgtcccataagttgtcaa 36412278  T
Q  253 -ccaaattggttgttcaaataacactcctcatt 284  Q
     |||||| |||||||||||||||||||||||||    
T  36412279 accaaat-ggttgttcaaataacactcctcatt 36412310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 34057968 - 34057840
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||| |||||| || || ||| ||||| | |||||  ||||||||| |||  |||| |||||  | ||||||| |     
T  34057968 catactcacgttactttttactttatctttctattgctttgtttttcgtgcaattaccaactttttctttataaattatagttgtcctaaaagttgtcaa 34057869  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
      || |||||||||||| |||||||||||    
T  34057868 tcaaatggttgttcaaacaacactcctca 34057840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 3953490 - 3953363
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||| |||||||||||| || |||||| | ||| |||| ||  ||||||||| |||  ||| ||||||  | || |||| |     
T  3953490 catactcacattactttttactctatctctctattgctttggttttcatgcaaatatcaactttttctttataaattatgattgtctcaaaaattgtcaa 3953391  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || || ||||||||||||||||||||    
T  3953390 ccaaatgattgttcaaataacactcctc 3953363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 51343464 - 51343591
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    |||||| || |||| ||||| |||||||||||||| || | ||||  || | ||||||  | ||||||||||||  ||||| ||||| |||||||||  |    
T  51343464 catacttacattatcttttaatttatctctctattgctttagtttttgtacaaatacctatattttctttgtaaattataaatgtcacataagttgtcaa 51343563  T
Q  253 ccaaattggttgttcaaataacactcct 280  Q
    | ||||| |||||| |||||||||||||    
T  51343564 ctaaattagttgtttaaataacactcct 51343591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 9753409 - 9753459
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||    
T  9753409 tttttactttatctctctattactttggtttttgtgtcaataccacatttt 9753459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 30863007 - 30862965
Alignment:
Q  235 ttgtcaaataagttgttaccaaattggttgttcaaataacact 277  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||    
T  30863007 ttgtcaaataaattgtcaccaaattgattgttcaaataacact 30862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 31376780 - 31376711
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  31376780 catactcacataattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 31376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 29573357 - 29573249
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   |||| |||||| ||| |||  ||||||||||| |||| || |||| |||||||    
T  29573357 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaa-tggttgt 29573259  T
Q  266 tcaaataaca 275  Q
    ||||||||||    
T  29573258 tcaaataaca 29573249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 44813463 - 44813406
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||| ||||||    
T  44813463 catactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 54694123 - 54694071
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  54694123 tcacgttattttttactttatctctctattgctttgattttcgtgcaaatacc 54694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 5042304 - 5042433
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| | ||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttatcac 5042403  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    ||||||| |||||||||||||||| |||||    
T  5042404 caaattgattgttcaaataacacttctcat 5042433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 35099020 - 35098893
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||| ||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaataagttgtcac 35098921  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  35098920 caaattggttgttcaaataacactcctc 35098893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 2688991 - 2688874
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| |||| ||||||||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataatttgtcaccaaattggtt 2688892  T
Q  264 gttcaaataacactcctc 281  Q
    |||||||||||| |||||    
T  2688891 gttcaaataacaatcctc 2688874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 8267835 - 8267711
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||   || ||||||||||||||||| ||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaataagttgtcac 8267736  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  8267735 caaattggttgttcaaataacactc 8267711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 16437580 - 16437452
Alignment:
Q  154 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |||| |    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataaattgtca 16437481  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    |||||||||||||||||||||||||||||    
T  16437480 ccaaattggttgttcaaataacactcctc 16437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 4430951 - 4430824
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaataagttgtcac 4430852  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||| ||||||||    
T  4430851 caaattggttgttcaaatagcactcctc 4430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 33620674 - 33620793
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||  |||| ||||||||||| || |||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgttaaataagttgtcactaaattggtt 33620773  T
Q  264 gttcaaataacactcctcat 283  Q
    |||||||||||| |||||||    
T  33620774 gttcaaataacattcctcat 33620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 21064241 - 21064112
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||| ||||   ||||||||||||||| ||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatatgggtgtcaaataagttgtcac 21064142  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    ||||||| ||||||||||||||||||||||    
T  21064141 caaattgattgttcaaataacactcctcat 21064112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 6931074 - 6930948
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||| |||| ||||| | ||||||| ||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgttagataagttattac 6930975  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    ||||||  |||||||||||||| ||||    
T  6930974 caaattaattgttcaaataacaatcct 6930948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 23126342 - 23126227
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    |||||||| |||||||||||||  ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||| | |||||| ||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaaataagttgtcatcaaattagttgtt 23126244  T
Q  267 caaataacactcctcat 283  Q
    |||||||||||| ||||    
T  23126243 caaataacactcatcat 23126227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 37700516 - 37700642
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||  |||  |||||||||| ||||| |     
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataggttgtcaa 37700614  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||||| |||||| ||||||||||||||    
T  37700615 caaattagttgtttaaataacactcctc 37700642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 5821627 - 5821503
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaatatataattgtcaaataagttgtta 252  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||  ||| ||| |||||||| |||| |    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaaataaattgtca 5821528  T
Q  253 ccaaattggttgttcaaataacact 277  Q
     ||||||| || |||||||||||||    
T  5821527 tcaaattgattattcaaataacact 5821503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 2224846 - 2224970
Alignment:
Q  154 catactcactttattttt--tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtt 251  Q
    |||||| || ||||||||  |||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||  |||  ||||||||||||||||     
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactactttt-tctttgtaaattatggttgtcaaataagttgtc 2224944  T
Q  252 accaaattggttgttcaaataacact 277  Q
    | ||||||||||||||||||||||||    
T  2224945 atcaaattggttgttcaaataacact 2224970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 18842336 - 18842258
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 39088869 - 39088756
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||||||||||||||||||  |||||||||| || |||||||  |||||||||||||| ||||  |||||||||||||||| || |||||||||||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacct-ttttttctttgtaaaatatcgttgtcaaataagttgtcactaaattggttgttc 39088771  T
Q  268 aaataacactcctca 282  Q
    |||||||||| ||||    
T  39088770 aaataacactactca 39088756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 43441794 - 43441921
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||||  |||  |||||  | ||||||| |     
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcttaaaagttgtcaa 43441893  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  43441894 ccaaatggttgttcaaataacactcctc 43441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 15267850 - 15267959
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||| |||||||||||||||||  |||  || |||||||| || | | ||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaaagtatggttatcaaataaattatcatcaaattggtt 15267949  T
Q  264 gttcaaataa 273  Q
    ||||||||||    
T  15267950 gttcaaataa 15267959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 39628845 - 39628974
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| |||||||| ||||||||| ||||||  ||||||||  |||||||||| | |||||||||| |||  ||| |||||||||||| |||| ||    
T  39628845 catattcacattatttttaactttatctttctattgttatggtttttgtgccaatactatttttttctttataaattatgattgtcaaataaattgtcac 39628944  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
     |||||  ||||||||||||||||||||||    
T  39628945 aaaattatttgttcaaataacactcctcat 39628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 42267416 - 42267524
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    |||||||||||||||||||||  |||| |||||||| |||||| | |||||||||| |||  |||  |||||||||||||||| | ||||||||||||||    
T  42267416 tttttactttatctctctattgttatgatttccgtgtcaatacta-ttttttctttataaattatggttgtcaaataagttgtcatcaaattggttgttc 42267514  T
Q  268 aaataacact 277  Q
    ||||||||||    
T  42267515 aaataacact 42267524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 41175721 - 41175594
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| ||||||   |||||||||||||  |||  |||||| ||||||||| |     
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaa 41175622  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  41175621 ccaaatggttgttcaaataacactcctc 41175594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 8675448 - 8675319
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 8675349  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || |||||||||||||||||||||||||    
T  8675348 ccaaatggttgttcaaataacactcctcat 8675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 9226357 - 9226481
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta- 252  Q
    ||||||||| |||||||| ||||||||||||||||  | || ||||||||| |||||    |||||||||||||  ||||||||||| | ||||||| |     
T  9226357 catactcacattattttt-actttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtcacaaaagttgtcaa 9226455  T
Q  253 ccaaattggttgttcaaataacactc 278  Q
    ||||||||||||||||||||||||||    
T  9226456 ccaaattggttgttcaaataacactc 9226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 17402922 - 17402814
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||| |||||||| |||||  | ||||| |||| |||  |||  | |||||||||||||| ||||||||||||||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtcaatattaattttt-ctttataaattatggtagtcaaataagttgtcaccaaattggttgttc 17402824  T
Q  268 aaataacact 277  Q
    ||||||||||    
T  17402823 aaataacact 17402814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 15953060 - 15952936
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||  |||  |||||| ||||||||| |     
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaa 15952961  T
Q  254 caaattggttgttcaaataacactc 278  Q
    | || ||||||||||||||||||||    
T  15952960 ccaaatggttgttcaaataacactc 15952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 10649491 - 10649618
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||||  |||  |||||| | ||||||| |     
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaa 10649590  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  10649591 ccaaatggttgttcaaataacactcctc 10649618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 189718 - 189591
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||| |||  ||| ||||||  | ||||||| |     
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtcccaaaagttgtcaa 189619  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || || ||||||||||||||||||||    
T  189618 ccaaatgattgttcaaataacactcctc 189591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 41724256 - 41724370
Alignment:
Q  165 tattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggtt 263  Q
    ||||||||||||||| ||||||||| | |||||||||||  ||||||  ||||||||||||||  ||| ||| ||| |||| ||||  | ||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaaattatgattatcacataaattgtcaatcaaattggtt 41724355  T
Q  264 gttcaaataacactc 278  Q
    ||||| |||||||||    
T  41724356 gttcagataacactc 41724370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 43214074 - 43213944
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||  |||||||||| |||  |||| ||||   | ||||||| |     
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgttttaaaagttgtcaa 43213975  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    | || ||||||||||||||||||||||||||    
T  43213974 ccaaatggttgttcaaataacactcctcatt 43213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 9581635 - 9581708
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||   |||||||||||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaa 9581708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19840001 - 19839928
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| |||| || ||||||||||||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaa 19839928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 9977212 - 9977280
Alignment:
Q  205 caataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataa 273  Q
    |||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| ||||||    
T  9977212 caatactacttttttctttgtaaaatatagttgtcaaataaattgtcaccaaattagttgttgaaataa 9977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 19481197 - 19481070
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | ||||| |||||||  |||||||||||||  |||| |||||  | ||||| | |     
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtcccaaaagttatcaa 19481098  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || || ||||||||||||||||||||    
T  19481097 ccaaatgattgttcaaataacactcctc 19481070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 38704212 - 38704089
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | |||||||||     
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgttaa 38704113  T
Q  254 caaattggttgttcaaataacact 277  Q
      || |||||||||||||||||||    
T  38704112 tcaaatggttgttcaaataacact 38704089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 3640212 - 3640086
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||| |||||| || || ||| | ||| ||||||   ||||||||| |||  |||  |||||| ||||||||| |     
T  3640212 catactcacattattttttactttatctttctattgctttgattttcatgcaaatacccactttttctttataaattatggttgtcacataagttgtcaa 3640113  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    | || |||| |||||||||||||||||    
T  3640112 ctaaatggtagttcaaataacactcct 3640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 6940151 - 6940034
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   |||| |||||| ||| |||  |||||||||||||||| || |||| |||||||    
T  6940151 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaa-tggttgt 6940053  T
Q  266 tcaaataacactcctcatt 284  Q
    ||||||||||| |||||||    
T  6940052 tcaaataacacacctcatt 6940034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 34124677 - 34124807
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| ||||  |||||||  |||||||||||||  |||  |||||  | || |||| |     
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaattatggttgtcttaaaaattgtcaa 34124776  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
      || ||||||||||||||||||||||||||    
T  34124777 ttaaatggttgttcaaataacactcctcatt 34124807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 20770187 - 20770260
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaa 20770260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 32912094 - 32912223
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||| | ||||||  | |||||| ||||  |||||||  ||||||||| |||  ||| ||||||  | ||||||| |     
T  32912094 catactcacattactttttactttatttatctattgttttggttttcgtgtaaataccaactttttctttataaattatgattgtcccaaaagttgtcaa 32912193  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || |||||||||||||||||||||||||    
T  32912194 ccaaatggttgttcaaataacactcctcat 32912223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 18397180 - 18397096
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgt 238  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| ||||| ||||||  ||||||||||||||  |||||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 6517768 - 6517835
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttct 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 1839360 - 1839287
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| ||||| |||| |  ||||||||||||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaa 1839287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15478714 - 15478787
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| ||||| |||| ||  |||||||||||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaa 15478787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 43196640 - 43196584
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  43196640 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatac 43196584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 9939433 - 9939319
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   |||| |||||| ||| |||  ||||||||||| |||| || |||| |||||||    
T  9939433 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaa-tggttgt 9939335  T
Q  266 tcaaataacactcctc 281  Q
    ||||||||||| ||||    
T  9939334 tcaaataacacacctc 9939319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 18695388 - 18695502
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| ||||| || |||   |||| |||||| ||| |||  |||||||||||||||| || |||| |||||||    
T  18695388 tttttactttatctctctattgctttgattttcgtgctaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaa-tggttgt 18695486  T
Q  266 tcaaataacactcctc 281  Q
    ||||||||||| ||||    
T  18695487 tcaaataacacacctc 18695502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  155 atactcactttattttttactttatctctctatta 189  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 20565133 - 20565004
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 20565034  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    ||||||||||||||||||||||||||||||    
T  20565033 caaattggttgttcaaataacactcctcat 20565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 3603167 - 3603297
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |     
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcat 3603266  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||||||||||||||||||||||||||||    
T  3603267 caaattggttgttcaaataacactcctcatt 3603297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 756912 - 757033
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||  |||||||||||||||| ||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttgtcac 757011  T
Q  254 caaattggttgttcaaataaca 275  Q
    ||||||||||||||||||||||    
T  757012 caaattggttgttcaaataaca 757033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 33024586 - 33024462
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||| ||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcac 33024487  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| |||||||||||||||||    
T  33024486 caaattgattgttcaaataacactc 33024462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 38303703 - 38303579
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| | ||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttatcac 38303604  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  38303603 caaattggttgttcaaataacactc 38303579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 1852966 - 1852839
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |     
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcat 1852867  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||||||||| |||||||||||||||||    
T  1852866 caaattggttattcaaataacactcctc 1852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 7128174 - 7128301
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 7128273  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  7128274 caaattgattgttcaaataacactcctc 7128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 8411733 - 8411606
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||| ||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgtcac 8411634  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||| ||||    
T  8411633 caaattggttgttcaaataacacacctc 8411606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 26837508 - 26837635
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 26837607  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  26837608 caaattggttgttcaaataacactcctc 26837635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 3024765 - 3024644
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||| ||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaataagttgtcac 3024666  T
Q  254 caaattggttgttcaaataaca 275  Q
    |||||| |||||||||||||||    
T  3024665 caaattagttgttcaaataaca 3024644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 26585893 - 26585765
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||| | |    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcatc 26585794  T
Q  255 aaattggttgttcaaataacactcctcat 283  Q
    |||||||||||||||||||||||||||||    
T  26585793 aaattggttgttcaaataacactcctcat 26585765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 46082136 - 46082008
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| || | ||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaaataaattatcac 46082037  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    ||||||| ||| |||||||||||||||||    
T  46082036 caaattgattgctcaaataacactcctca 46082008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 902694 - 902821
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||| | | |     
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaataagctatcat 902793  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  902794 caaattggttgttcaaataacactcctc 902821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 4514469 - 4514342
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||| ||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgtcac 4514370  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
     |||||| ||||||||||||||||||||    
T  4514369 taaattgattgttcaaataacactcctc 4514342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 9008281 - 9008408
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 9008380  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  9008381 caaattgattgttcaaataacactcctc 9008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 51191844 - 51191972
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||  ||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||| ||||  |||||||||||||||| ||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcac 51191943  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    ||||||||||||||||||||||| |||||    
T  51191944 caaattggttgttcaaataacacccctca 51191972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 36779284 - 36779156
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || ||| ||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||| || | ||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaataaattatcac 36779185  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    ||||||| |||||||||||||||||||||    
T  36779184 caaattgattgttcaaataacactcctca 36779156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 21340578 - 21340704
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| || ||||||| |||||| ||||  |||||||||||||||| ||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaaataagttgtcac 21340676  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  21340677 caaattgattgttcaaataacactcctc 21340704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 47214264 - 47214398
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||||  | |  |||||||||||||||| ||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttgtcac 47214362  T
Q  254 caaattggttgttcaaataacactcctcattcaatt 289  Q
     ||||||||||||||||||||||  ||| |||||||    
T  47214363 aaaattggttgttcaaataacaccactctttcaatt 47214398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 51286382 - 51286260
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||  | |  |||||||||||||||| ||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttgtcac 51286284  T
Q  254 caaattggttgttcaaataacact 277  Q
     |||||||||||||||||||||||    
T  51286283 aaaattggttgttcaaataacact 51286260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 34008236 - 34008363
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||||||  | || |||||||||||||||| ||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaaataagttgtcac 34008334  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
     |||||| |||||||||||||||| ||||    
T  34008335 aaaattgattgttcaaataacactactca 34008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 16986994 - 16987120
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||| || |||||||||||||  | ||||||||||||||||||| ||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaaataagttgtcac 16987092  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||  || |||||||||||||||||    
T  16987093 caaattaattcttcaaataacactcctc 16987120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 1790564 - 1790688
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| ||||||||||||| |||||||  || |||||||||||||||| || |||||||||||||| ||||  |||||||||||||||| ||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaaataagttgtcac 1790663  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||| ||| ||||||||||||||    
T  1790664 caaattagttattcaaataacactc 1790688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 36673746 - 36673627
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||  |||  |||||||||||||| | ||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttatcac 36673648  T
Q  254 caaattggttgttcaaataac 274  Q
    ||||||| |||||||||||||    
T  36673647 caaattgattgttcaaataac 36673627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 284
Target Start/End: Original strand, 37178769 - 37178890
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg-taatatataattgtcaaataagttgttaccaaattggt 262  Q
    |||||||||  |||| |||| |||| |||||||||||||| ||||||||||||||| |||  ||| ||||  |||||||||||||||| ||||||||| |    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttttttttataaaatatggttgtcaaataagttgtcaccaaattgat 37178868  T
Q  263 tgttcaaataacactcctcatt 284  Q
    ||||||||||| ||||||||||    
T  37178869 tgttcaaataaaactcctcatt 37178890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 46172422 - 46172326
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt 250  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||| || || |||| |||||| ||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaaaatttagttgttaaataaattgt 46172326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 50781585 - 50781458
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| |||||||||| |||  ||| ||||||  | ||||||| ||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtcctaaaagttgtcta 50781486  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    ||||| |||||||||||||||||||||||    
T  50781485 ccaaa-tggttgttcaaataacactcctc 50781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 44632584 - 44632705
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||| | ||||||| |||| | || |||||||||||||  |||  || |||||||||| || |     
T  44632584 catactcacattattttttactttatctctctattgctatagattccgtgtcaatgctac-tttttctttgtaaattatggttatcaaataagtcgtcat 44632682  T
Q  254 caaattggttgttcaaataacac 276  Q
    |||||||||||||||||||||||    
T  44632683 caaattggttgttcaaataacac 44632705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 52362538 - 52362667
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| |||  |||  |||||  | ||||||| |     
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaa 52362637  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || |||||||||||||||||||||||||    
T  52362638 ccaaatggttgttcaaataacactcctcat 52362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 21486332 - 21486268
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 50328156 - 50328029
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaa 50328057  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  50328056 ccaaatggttgttcaaataacactcctc 50328029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 13489718 - 13489848
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||  |||||  | ||||||| |     
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccagaagttgtcaa 13489817  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    | || | ||||||||||||||||||||||||    
T  13489818 ccaaatagttgttcaaataacactcctcatt 13489848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 40316959 - 40316832
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||| |||  |||  |||||  | ||||||| |     
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaa 40316860  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  40316859 ccaaatggttgttcaaataacactcctc 40316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 36494568 - 36494630
Alignment:
Q  215 tttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacact 277  Q
    |||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  36494568 tttttctttgtaaattatgattgtcaaataagttgtcaccaaattggttgttcaaataacact 36494630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 32319324 - 32319252
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| || |||||||||||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaa 32319252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 50882115 - 50881998
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||||||||||| || ||| ||||| |||||   |||||||||| |||  ||| ||||||| |||| |||| |   || |||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtcacataaattgtcaatcaaatggtt 50882016  T
Q  264 gttcaaataacactcctc 281  Q
    ||||||||||||||||||    
T  50882015 gttcaaataacactcctc 50881998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 10890061 - 10889933
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||||  |||  |||||| | ||||||| |     
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaa 10889962  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    | || | ||||||||||||||||||||||    
T  10889961 ccaaatagttgttcaaataacactcctca 10889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 32915087 - 32914960
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||||||  |||||||||||||  ||| |||||   | ||||||| |     
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgttccaaaagttgtcaa 32914988  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || | |||||||||||||||||||||    
T  32914987 ccaaatagttgttcaaataacactcctc 32914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 34254366 - 34254231
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||| ||||| |  |||||||||||||  |||| |||||  | ||||| | |     
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtcccaaaagttatcaa 34254267  T
Q  254 caaattggttgttcaaataacactcctcattcaatt 289  Q
    | || || ||||||||||||||||||||||| ||||    
T  34254266 ccaaatgattgttcaaataacactcctcattaaatt 34254231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 41507210 - 41507087
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| |||| || ||||||||||| ||||||| | |||||| | || |||||||   |||||||||||||  |||| |||||||||||||||| |    
T  41507210 catactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaaataagttgtca 41507111  T
Q  253 ccaaattggttgttcaaataacac 276  Q
     | || ||||||||||||||||||    
T  41507110 accaaatggttgttcaaataacac 41507087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 24673132 - 24673240
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||| |||||||||||||| || | ||||||||| |||||| | ||||||||||||||  | |  ||||||||||||||||||  ||||| |||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgtaaatttttgttgtcaaataagttgttataaaattagtt 24673230  T
Q  264 gttcaaataa 273  Q
    ||| ||||||    
T  24673231 gttgaaataa 24673240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 48326037 - 48326152
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    |||||||||||||||||||||| || || ||| ||| | |||||||  |||||||||||||  |||  ||||| || ||||||| | | || ||||||||    
T  48326037 ttttttactttatctctctattgctttgattttcgtacaaataccaactttttctttgtaaattatggttgtccaa-aagttgtcaaccaaatggttgtt 48326135  T
Q  267 caaataacactcctcat 283  Q
    |||||||||||||||||    
T  48326136 caaataacactcctcat 48326152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 50824797 - 50824924
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| | || |||||||   |||||||||||||  |||  ||||   |||||||||  |    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaattatggttgtatcataagttgtcca 50824896  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    ||||| |||||||||||||||||||||||    
T  50824897 ccaaa-tggttgttcaaataacactcctc 50824924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 8447793 - 8447920
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||| | |||||||||||||||||||||||  | | ||||  |||| |||| ||  |||||||||||||  ||| ||||||| ||||||| | | |    
T  8447793 atactcacatcattttttactttatctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaattatgattgtcacataagttatcaac 8447892  T
Q  255 aaattggttgttcaaataacactcctca 282  Q
     || || |||||||||||||||||||||    
T  8447893 taaatgattgttcaaataacactcctca 8447920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 33358174 - 33358047
Alignment:
Q  154 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||||||||| |||||||||||| |||  | || ||| ||||| ||||||   |||||||||||||  |||  |||||| ||||||||| |    
T  33358174 catactcacattatttttttactttatctctcaattgatttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtca 33358075  T
Q  253 ccaaattggttgttcaaataacactcct 280  Q
     | || ||||||||||||||||||||||    
T  33358074 accaaatggttgttcaaataacactcct 33358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 36577427 - 36577300
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  ||||||||| |||  |||  |||||  | ||||||| |     
T  36577427 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaa 36577328  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  36577327 ccaaatggttgttcaaataacactcctc 36577300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 29586049 - 29586095
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttcc 200  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 38713636 - 38713749
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggtt 263  Q
    |||||||||||||||||||| |||| || || ||| ||||| ||||||  |||||||||| |||  ||| ||||||| ||||||||| | | || || ||    
T  38713636 ttattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtcatataagttgtcagctaaatgatt 38713735  T
Q  264 gttcaaataacact 277  Q
     |||||||||||||    
T  38713736 tttcaaataacact 38713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 8200131 - 8200259
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||| ||||| | |||    |||||||||||||  |||  |||||  ||||||||| |     
T  8200131 catactcacattattttttactttatccctctattgctttggttttcgtgcaactacgtactttttctttgtaaattatggttgtcccataagttgtcaa 8200230  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    | ||  || ||||||||||||||||||||    
T  8200231 ccaaaaggctgttcaaataacactcctca 8200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 34040515 - 34040440
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgcca--ataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||||| |  ||||||  |||||||||||||    
T  34040515 catactcacattattttttactttatctctctattactttgattttcgtgcaaatataccaactttttctttgtaa 34040440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 52714916 - 52714792
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | |||||  |||||||||||||  |||  |||||  | ||||||| |     
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaattattgttgtcccaaaagttgtcaa 52714817  T
Q  254 caaattggttgttcaaataacactc 278  Q
      || ||||||||||||||||||||    
T  52714816 tcaaatggttgttcaaataacactc 52714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 35539278 - 35539164
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta-ccaaattggt 262  Q
    |||||||||||||||||||||| ||  | |||||||||||| |||||    |||||||||||||  |||| |||||| | ||||||| | |||||||  |    
T  35539278 ttattttttactttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtcaca-aagttgtcagccaaattaat 35539180  T
Q  263 tgttcaaataacactc 278  Q
    ||||||||||||||||    
T  35539179 tgttcaaataacactc 35539164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 46543457 - 46543331
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||||  |||||||||||||||||||||||| || |||||| ||||| |||| ||  ||||| ||| |||  ||||||||||  | || || | |     
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaatatcaacttttt-tttttaaattataattgtcccaaaaattatcaa 46543359  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  46543358 ccaaatggttgttcaaataacactcctc 46543331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 47721465 - 47721592
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||||  |||  |||||  |||||||||       
T  47721465 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttgtcca 47721564  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||| ||||||||||||||    
T  47721565 ctaaatggttgtttaaataacactcctc 47721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 47728457 - 47728584
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||||  |||  |||||  |||||||||       
T  47728457 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttgtcca 47728556  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||| ||||||||||||||    
T  47728557 ctaaatggttgtttaaataacactcctc 47728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 48220159 - 48220089
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || |||  |||| |||||||  ||||||||||    
T  48220159 catactcacattattttttactttatctctctatttctttgatttttgtgcaaataccaactttttctttg 48220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 280
Target Start/End: Original strand, 50433826 - 50433952
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-tac 253  Q
    |||||||| | ||||||||||||||||||||||| || ||  |||||| | ||||||   ||||||||| |||  |||  |||||| | |||||||  |     
T  50433826 atactcacataattttttactttatctctctattgctttgacttccgtacaaatacctactttttctttataaattatggttgtcacacaagttgtcaat 50433925  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    |||||| ||||||||||||||||||||    
T  50433926 caaattcgttgttcaaataacactcct 50433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15015454 - 15015527
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| ||||| |||||||  |||||||||||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaa 15015527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19969577 - 19969504
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||  ||||||   ||||||||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaa 19969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 35136900 - 35137029
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||| |  |||||||||||||  |||  |||||  | || |||| |     
T  35136900 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacaaactttttctttgtaaattatggttgtcctaaaaattgtcaa 35136999  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || || ||||||||||||||||||||||    
T  35137000 ccaaatgattgttcaaataacactcctcat 35137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 3226073 - 3226002
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||||||||||||||||||||||||| || |||||| ||| | ||||    ||||||||||||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttttcgtacaaatatatattttttctttgtaa 3226002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 29586978 - 29587017
Alignment:
Q  243 taagttgttaccaaattggttgttcaaataacactcctca 282  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  29586978 taagttgtcaccaaattggttgttcaaatagcactcctca 29587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 284
Target Start/End: Complemental strand, 21486248 - 21486218
Alignment:
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||||||||||||||||||||||||||||    
T  21486248 caaattggttgttcaaataacactcctcatt 21486218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 44789158 - 44789089
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  44789158 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 44789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 46911349 - 46911418
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  46911349 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 46911418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 49660235 - 49660285
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  49660235 catactcacattatttttttactttctctctctattactttggtttccgtg 49660285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  154 catactcactttattttttactttatctctctat 187  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 37588690 - 37588618
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| ||||| || | ||||||||||||    
T  37588690 catactcacataattttttactttatctctctattgctttgattttcgtg-caatatcaatattttctttgtaa 37588618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 48624933 - 48624966
Alignment:
Q  155 atactcactttattttttactttatctctctatt 188  Q
    |||||||| |||||||||||||||||||||||||    
T  48624933 atactcacattattttttactttatctctctatt 48624966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 49241520 - 49241463
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||| ||||| ||||||    
T  49241520 catactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacc 49241463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 50242382 - 50242423
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  50242382 ttttactttctctctctattactttggttttcgtgccaatac 50242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 21093271 - 21093243
Alignment:
Q  256 aattggttgttcaaataacactcctcatt 284  Q
    |||||||||||||||||||||||||||||    
T  21093271 aattggttgttcaaataacactcctcatt 21093243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 46281506 - 46281621
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgt-aatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || || ||| | |||||| |||   |||| |||||| ||| |||  |||||||||| ||||| || |||| |||||||    
T  46281506 tttttactttatctctctattgctttgattttcatgccaaaacctacttttcctttgtaaatttatggttgtcaaatatgttgtctatcaaa-tggttgt 46281604  T
Q  266 tcaaataacactcctca 282  Q
    ||||||||||| |||||    
T  46281605 tcaaataacacacctca 46281621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 47215744 - 47215617
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta- 252  Q
    ||||||||| |||||||| | ||||| ||||||||  | | |||||||||| |||||   |||||||||| |||  |||  |||||| | ||||| | |     
T  47215744 catactcacattattttt-attttatttctctattgttttagtttccgtgcaaatacatattttttctttataaattatggttgtcacaaaagttatcaa 47215646  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    ||||||| |||||||||||||||||||||    
T  47215645 ccaaattagttgttcaaataacactcctc 47215617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 48261195 - 48261259
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccactttt 217  Q
    ||||||||| |||| |||||||||| |||||||||| || ||||||  ||||||||||| |||||    
T  48261195 catactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctctttt 48261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 1633905 - 1633778
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 1633806  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  1633805 caaattggttgttcaaataacactcctc 1633778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 7956022 - 7955894
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 7955923  T
Q  254 caaattggttgttcaaataacactcctca 282  Q
    ||||||| |||||||||||||||||||||    
T  7955922 caaattgattgttcaaataacactcctca 7955894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 16966841 - 16966968
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||| | ||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttttcac 16966940  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  16966941 caaattggttgttcaaataacactcctc 16966968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 36110194 - 36110321
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 36110293  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  36110294 caaattggttgttcaaataacactcctc 36110321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 32843943 - 32843830
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 32843844  T
Q  268 aaataacactcctc 281  Q
    ||||||||||||||    
T  32843843 aaataacactcctc 32843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 11017861 - 11017988
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttgtcac 11017960  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||  ||||||||||||||||||||    
T  11017961 caaattaattgttcaaataacactcctc 11017988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 11658015 - 11657895
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |     
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaaataagttgtcag 11657917  T
Q  254 caaattggttgttcaaataaca 275  Q
    ||||||||||||||||||||||    
T  11657916 caaattggttgttcaaataaca 11657895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 30136030 - 30135902
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtc-aaataagttgtta 252  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||| ||||||||||| |    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaaaataagttgtca 30135931  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    |||||||||||||||||||||||||||||    
T  30135930 ccaaattggttgttcaaataacactcctc 30135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 7478836 - 7478962
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||| ||||||||||| ||||| |     
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaaataggttgtcaa 7478934  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    |||||| |||||||||||||||||||||    
T  7478935 caaattagttgttcaaataacactcctc 7478962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 1871629 - 1871500
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| ||||| ||||||| ||||||||  |||  |||||||||||||||| |     
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaacttttt-ctttgtaaattatggttgtcaaataagttgtaat 1871531  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
    |||||||||||||||||||||||||||||||    
T  1871530 caaattggttgttcaaataacactcctcatt 1871500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 7586177 - 7586048
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||| | ||||||| ||||||||  |||| |||||||||||||||| |     
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctacttttt-ctttgtaaattatagttgtcaaataagttgtcat 7586079  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
     ||||||||||||||||||||||||||||||    
T  7586078 gaaattggttgttcaaataacactcctcatt 7586048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 37783986 - 37783860
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||||| ||||||||| ||||||||||||| ||||  |||||||||||||||| ||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaataagttgtcac 37783887  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    ||||||||||| |||||||||||||||    
T  37783886 caaattggttgatcaaataacactcct 37783860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 45529261 - 45529167
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagtt 248  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 45529167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 13971182 - 13971303
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacca 255  Q
    ||||||| ||| |||  ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||      |||||||||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgtaatgg----ttgtcaaataagttgttacca 13971277  T
Q  256 aattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||    
T  13971278 aattggttgttcaaataacactcctc 13971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 34591340 - 34591447
Alignment:
Q  174 ctttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataa 273  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||| ||||||||| ||||||||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataa 34591439  T
Q  274 cactcctc 281  Q
    ||||||||    
T  34591440 cactcctc 34591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 35564345 - 35564468
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||| |||||| ||||  |||| |||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcac 35564444  T
Q  254 caaattggttgttcaaataacact 277  Q
     ||||| |||||||||||||||||    
T  35564445 taaattagttgttcaaataacact 35564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 40739927 - 40739801
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||||  || |||||||| || | ||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgtaaaatatggttatcaaataaattatcac 40739829  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||| ||||||||||||||    
T  40739828 caaattggttgtttaaataacactcctc 40739801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 7592905 - 7593036
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaatatataattgtcaaataagttgtta 252  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| |||  ||| ||||||||||||||||| |    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgtca 7593004  T
Q  253 ccaaattggttgttcaaataacactcctcatt 284  Q
    ||| |||| ||||||||||||||||| |||||    
T  7593005 ccatattgattgttcaaataacactcatcatt 7593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 32847701 - 32847574
Alignment:
Q  155 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||| ||||||||| ||||||| ||||||||  | ||||||||||| |||||||||||||||||||||||  |||  |||||||||||||| | ||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaataagttatcac 32847602  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  32847601 caaattgattgttcaaataacactcctc 32847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 33589245 - 33589119
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| || |||||| |||||||  ||  ||||||||||||||||| ||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaatatca-ttttttttttgtaaagtacgattgtcaaataagttgtcac 33589147  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| |||||||||||||| |||||    
T  33589146 caaattgattgttcaaataacaatcctc 33589119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 41521024 - 41521147
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||||| ||||  |||| | ||||||| | |     
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatatggttgttatataagttatcat 41521123  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||||||||||||||||||||    
T  41521124 caaattggttgttcaaataacact 41521147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 36531651 - 36531774
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  |||||||||||||||||||||||||  |||| ||||||||||||||| || |||||||||||||  | | |||||||||||  || | ||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaaattttgattgtcaaatagattatcac 36531749  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| |||||||||||||||||    
T  36531750 caaattgattgttcaaataacactc 36531774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 2733044 - 2733173
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtt-a 252  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||   ||||||||| |||  ||| ||||||| | || ||||| |    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtcacaaaaattgttaa 2733142  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
    || ||||||||||||||||||||||||||||    
T  2733143 ccgaattggttgttcaaataacactcctcat 2733173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 6968248 - 6968119
Alignment:
Q  154 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||| ||||||||||||||| ||||||  ||||||||||||  |||||| |||||||| |||||||  |||  |||| || |||||||| |    
T  6968248 catactcacattacttttttactttatctgtctattgttatggtttccgtatcaatactactttttt-tttgtaaattatggttgtaaattaagttgtca 6968150  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
    |||||||| ||||||||||||||||||||||    
T  6968149 ccaaattgattgttcaaataacactcctcat 6968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 30439521 - 30439394
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||   ||||||||||||||  |||  |||||| ||||||| | |     
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaattatggttgtcacataagttatcaa 30439422  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  30439421 ccaaatggttgttcaaataacactcctc 30439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 38234063 - 38234191
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt---ttttctttgtaatatataattgtcaaataagttgt 250  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||  ||   |||| ||| |||  |||  |||||| | |||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacctatttgattttttttataaattatggttgtcacacaagttgt 38234162  T
Q  251 -taccaaattggttgttcaaataacactc 278  Q
      |||||||||||||||||||||||||||    
T  38234163 caaccaaattggttgttcaaataacactc 38234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 41159904 - 41159831
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaa 41159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 16872171 - 16872044
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||||  |||  |||||  | |||||||||     
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattatggttgtcccaaaagttgttaa 16872072  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||| ||||||    
T  16872071 ccaaatggttgttcaaataaccctcctc 16872044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 29867257 - 29867191
Alignment:
Q  212 acttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacactc 278  Q
    |||||||||||| |||  ||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  29867257 acttttttctttataaattatgattgtcaaataagttgttaccaaattagttgttcatataacactc 29867191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 31597004 - 31597134
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||  |||| |||||||  |||||||||||||  ||| ||||||  | ||||| | |     
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtctcaaaagttatcaa 31597103  T
Q  254 caaattggttgttcaaataacactcctcatt 284  Q
      || ||||||||||||||||||||||||||    
T  31597104 tcaaatggttgttcaaataacactcctcatt 31597134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 42110196 - 42110071
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-tac 253  Q
    |||||||||| |||||||||||||| ||||||||  | |||||||| | | ||||| |  |||||||||||||  ||| || |||| |||||||||  ||    
T  42110196 atactcactt-attttttactttatttctctattgttttggtttccatacaaatactaactttttctttgtaaattatgatcgtcacataagttgtcaac 42110098  T
Q  254 caaattggttgttcaaataacactcct 280  Q
    |||||| ||||||||||||||||||||    
T  42110097 caaattagttgttcaaataacactcct 42110071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 18651463 - 18651539
Alignment:
Q  200 cgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttcaaataacact 277  Q
    ||||||||||| |||||| |||||||||  |||  ||||||||||||||||||| |||||||||||| ||||||||||    
T  18651463 cgtgccaatactactttt-tctttgtaaattatggttgtcaaataagttgttactaaattggttgtttaaataacact 18651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 4994437 - 4994561
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| |||| |   ||||||||| |||  |||   |||||  ||||||||  |    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaatatctactttttctttataaattatgggtgtcacgtaagttgtcaa 4994536  T
Q  253 ccaaattggttgttcaaataacact 277  Q
    |||| ||||||||||||||||||||    
T  4994537 ccaatttggttgttcaaataacact 4994561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 6991823 - 6991695
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| |||||||||||||||||||||| || || ||||||  ||||  ||| |   ||||||||||||| ||||  |||||| |||||||||  |    
T  6991823 catactcacattattttttactttatctctcttttgctttggtttttgtgcatataactactttttctttgtaaaatatggttgtcatataagttgtcaa 6991724  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    |  ||||| ||||||||||||||||||||    
T  6991723 ctgaattgtttgttcaaataacactcctc 6991695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 39493940 - 39493814
Alignment:
Q  156 tactcactttattttttacttt-atctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    ||||||| |||||||| ||||| || |||||||| ||| ||| ||  ||||||||| | ||||||| || |||  ||| |||||||||||| || | |      
T  39493940 tactcacattatttttaacttttatttctctattgctagggtatcgatgccaatactatttttttcattataagttatgattgtcaaataaattatcatt 39493841  T
Q  255 aaattggttgttcaaataacactcctc 281  Q
    |||||||||||||||||||||||||||    
T  39493840 aaattggttgttcaaataacactcctc 39493814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 9208122 - 9208248
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta- 252  Q
    ||||||||| ||||||||   ||||||||||||||  | |||||| ||||| ||||||   ||||||||| ||   |||| |||||| | ||||||| |     
T  9208122 catactcacattattttta--tttatctctctattgttttggtttacgtgcaaatacctactttttctttatatattatagttgtcacaaaagttgtcaa 9208219  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    |||||||||||||||||||||||||||||    
T  9208220 ccaaattggttgttcaaataacactcctc 9208248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 12707205 - 12707333
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaatatataattgtcaaataagttgtta 252  Q
    ||||||||| ||| |||||| ||||||||||||||  | |||||| ||||  |||||| ||||||||||||||||  |||  |||||  ||||||  | |    
T  12707205 catactcacgttactttttaatttatctctctattgttttggttttcgtgtaaataccaacttttttctttgtaaattatggttgtcccataagtgctca 12707304  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
     | || |||||||||||||||||||||||    
T  12707305 accaaatggttgttcaaataacactcctc 12707333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 36885502 - 36885376
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| |||||||| ||||||||||| |||| || || ||| |||| |||||||   |||||||||||||  |||  |||||  |||||||||  |    
T  36885502 catactcacattattttt-actttatctctttattgctttgattttcgtgtcaatacctactttttctttgtaaattatggttgtcccataagttgtcca 36885404  T
Q  253 ccaaattggttgttcaaataacactcctc 281  Q
    ||||| |||||||||||||||||||||||    
T  36885403 ccaaa-tggttgttcaaataacactcctc 36885376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 888257 - 888150
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaata-tataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||| ||||||||||||||||| |||||| |||| ||||| |  |||||||||| ||| | |||| |||||||||||||||| ||| ||    ||||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtcaaataagttgtcacccaaaaaattgttc 888158  T
Q  268 aaataaca 275  Q
    ||||||||    
T  888157 aaataaca 888150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 1366657 - 1366718
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttt 216  Q
    |||||||  |||||||||||||||||||| |||| ||||| |||||||  ||||||||||||    
T  1366657 atactcaaattattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 10644803 - 10644687
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa-tatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    ||||||||||||||||||||| || |  ||| |||||||| |||   |||| |||||||| | |||  |||||||||||||||| || ||||| ||||||    
T  10644803 tttttactttatctctctattgctttaattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaat-ggttgt 10644705  T
Q  266 tcaaataacactcctcat 283  Q
    ||||||||||| ||||||    
T  10644704 tcaaataacacacctcat 10644687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 8645234 - 8645314
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagtt 248  Q
    |||||||||||||||||||||  | |||||||| ||| |||||   |||||||||||||| |||| ||| ||| |||||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatatgattatcacataagtt 8645314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggttt 198  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 38708310 - 38708186
Alignment:
Q  155 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||||| ||||||||| |||||||||||| |||  | || ||||||||| |||| |  ||||||||||| ||  |||  |||||| |||| |||| |     
T  38708310 atactcacattatttttttactttatctctccattgttttgatttccgtgcaaatatctattttttctttgcaaattatggttgtcacataaattgtcaa 38708211  T
Q  254 -caaattggttgttcaaataacact 277  Q
     ||||||||||||||||||||||||    
T  38708210 tcaaattggttgttcaaataacact 38708186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 16327167 - 16327093
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac-cacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaa 16327093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 23793105 - 23792983
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||| |||||| |  ||| ||  |||| |||| || || |||||||||||  |||| |||||  |||| |||| |     
T  23793105 catactcacattattttttactttatctttctattgcgttggattttgtgcaaataacaattctttctttgtaaattatagttgtctcataaattgtcaa 23793006  T
Q  254 caaattggttgttcaaataacac 276  Q
    | || |||||||| |||||||||    
T  23793005 ccaaatggttgttgaaataacac 23792983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 29991468 - 29991537
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  29991468 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 29991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 7473041 - 7472984
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||| ||||| ||||||    
T  7473041 catactcacattactttttactttatctctctattgctttagttttcgtgcaaatacc 7472984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 39543520 - 39543451
Alignment:
Q  172 tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaa 241  Q
    ||||||||||||||||| || || ||||||||| |||||   ||||||||||||||  ||| ||||||||    
T  39543520 tactttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattatgattgtcaa 39543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 5277719 - 5277663
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||||||||| |||||||||||||| || || ||| ||||| |||||    
T  5277719 catactcacattattttttattttatctctctattgctttgattttcgtgcaaatac 5277663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 5864350 - 5864378
Alignment:
Q  255 aaattggttgttcaaataacactcctcat 283  Q
    |||||||||||||||||||||||||||||    
T  5864350 aaattggttgttcaaataacactcctcat 5864378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 14707345 - 14707234
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    |||||||||||||||| ||||| || || ||| | || |||||||   |||||||||||||  ||| ||||||  |||||||||  |||||| | |||||    
T  14707345 ttttttactttatctccctattgctttgattttcttgtcaatacctactttttctttgtaaattatgattgtctcataagttgtccaccaaa-tagttgt 14707247  T
Q  266 tcaaataacactc 278  Q
    |||||||||||||    
T  14707246 tcaaataacactc 14707234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 29028975 - 29028907
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||||||| |||||||||| |||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  29028975 atactcacattattttttaatttatctctctattgctttgatttttgtgcaaatacctattttttcttt 29028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 63 - 190
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcac 162  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  163 caaattggttgttcaaataacactcctc 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 3610976 - 3610849
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||  || ||||||||||||| ||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttgtcac 3610877  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||||||||||||||||||||||||    
T  3610876 caaattggttgttcaaataacactcctc 3610849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 14986746 - 14986633
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataagttgtcaccaaattggttgtt 14986647  T
Q  267 caaataacactcct 280  Q
    ||||||||||||||    
T  14986646 caaataacactcct 14986633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 34504076 - 34504200
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| ||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttgtcac 34504175  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||||||||||||||||||||||    
T  34504176 caaattggttgttcaaataacactc 34504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 2075466 - 2075343
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttgtcac 2075367  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||||||||||||||||||||    
T  2075366 caaattggttgttcaaataacact 2075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 11547544 - 11547417
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||   |||||||||| |||| ||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaattatggctgtcaaataaattgtcac 11547445  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    ||||||| ||||||||||||||||||||    
T  11547444 caaattgattgttcaaataacactcctc 11547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 5327593 - 5327479
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgtt 266  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||| |||||||||||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgtt 5327494  T
Q  267 caaataacactcctc 281  Q
    |||||||||||||||    
T  5327493 caaataacactcctc 5327479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 2777331 - 2777209
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| | ||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaaataagttatcac 2777233  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||| ||||||||||||||||    
T  2777232 caaattgattgttcaaataacact 2777209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 30036797 - 30036686
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgt 265  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||| ||||||||| ||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttgtcaccaaattgattgt 30036698  T
Q  266 tcaaataacact 277  Q
    ||||||||||||    
T  30036697 tcaaataacact 30036686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 335119 - 335239
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||  |||||||| |||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||||||||| ||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaataagttgtcac 335216  T
Q  254 caaattggttgttcaaataacac 276  Q
     |||||| |||||||||||||||    
T  335217 taaattgattgttcaaataacac 335239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 22341189 - 22341067
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||  | |||| ||||||| ||||||||  |||  |||||||||||||||| ||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactacttttt-ctttgtaaattattgttgtcaaataagttgtcac 22341091  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||||||||||||||||||||    
T  22341090 caaattggttgttcaaataacact 22341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 30152545 - 30152422
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| |||||||  |||  |||||||||||||| | ||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaataagttatcac 30152446  T
Q  254 caaattggttgttcaaataacact 277  Q
    ||||||| ||||||||||||||||    
T  30152445 caaattgattgttcaaataacact 30152422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 35213576 - 35213449
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  ||| ||||||  | ||||||| |     
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtcccaaaagttgtcaa 35213477  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  35213476 ccaaatggttgttcaaataacactcctc 35213449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 3199016 - 3199139
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||| | ||||||||| |||| |||||||||||||| |||||| || ||||||||| |||  ||| |||||||||||| || | |     
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactac-tttttctttataaattatgattgtcaaataaattatcat 3199114  T
Q  254 caaattggttgttcaaataacactc 278  Q
    |||||| ||||||||||||||||||    
T  3199115 caaattagttgttcaaataacactc 3199139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 4820307 - 4820387
Alignment:
Q  154 catactcactttattttttactttatctctctattactat--ggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||||||||| ||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 13658888 - 13659011
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| |||||| || |||||||||||||  |||  |||||||||| ||| | |     
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataggttttcat 13658986  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||  || ||||||||||||||    
T  13658987 caaattaattattcaaataacactc 13659011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 13143397 - 13143268
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||| |  |||||||||||||  |||  |||||  | ||||||| |     
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaattatggttgtcccaaaagttgtcaa 13143298  T
Q  254 caaattggttgttcaaataacactcctcat 283  Q
    | || |||||||||||||||||||||||||    
T  13143297 ccaaatggttgttcaaataacactcctcat 13143268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 754453 - 754326
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||  ||||   | || |||| |     
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgttccaaaaattgtcaa 754354  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  754353 ccaaatggttgttcaaataacactcctc 754326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 14693266 - 14693175
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataag 246  Q
    |||||||| |||||||||||||||||||||| || || |||||||||||| ||||||   |||||||||||||  |||| |||||| |||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtcacataag 14693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 18141316 - 18141189
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  || ||||||||||  |||  |||||| | ||||||| |     
T  18141316 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaacttattctttgtaaattatggttgtcacaaaagttgtcaa 18141217  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  18141216 ccaaatggttgttcaaataacactcctc 18141189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 32459518 - 32459404
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttgt 265  Q
    |||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||  |||||  | |||||||  | |||||| |||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaatcaaatt-gttgt 32459420  T
Q  266 tcaaataacactcctc 281  Q
    ||||||||||||||||    
T  32459419 tcaaataacactcctc 32459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 14699679 - 14699606
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||| ||||||   |||||||||||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaa 14699606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 23628429 - 23628545
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaata-ccac-ttttttctttgtaatatataattgtcaaataagttgt-taccaaattggttg 264  Q
    |||||||||||||||||||||| | |||||||||||| |||| | || |||||||||| |||  |||  |||||| | || ||||  |||||||||||||    
T  23628429 tttttactttatctctctattattttggtttccgtgcaaatatctactttttttctttataaattatggttgtcataaaaattgtcaaccaaattggttg 23628528  T
Q  265 ttcaaataacactcctc 281  Q
    || ||||||||||||||    
T  23628529 tttaaataacactcctc 23628545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 20822883 - 20822761
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| | |||| ||| |||  |||  |||||  | ||||||| |     
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaatatttt-tttataaattatggttgtcctaaaagttgtcaa 20822785  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || |||||||||||||||||||    
T  20822784 ccaaatggttgttcaaataacact 20822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 1369430 - 1369540
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttgttc 267  Q
    ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||  |||  |||||  | || |||| | | || |||||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtctcaaaaattgtcaaccaaatggttgttc 1369529  T
Q  268 aaataacactc 278  Q
    |||||||||||    
T  1369530 aaataacactc 1369540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 2689079 - 2688950
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgtta- 252  Q
    ||||||||| |||||||| ||||||||||||||||  | ||||||  |||| ||||||   ||||||||| |||  |||  |||||| | ||||||| |     
T  2689079 catactcacattattttt-actttatctctctattgttttggtttatgtgcaaatacctactttttctttataaattatggttgtcacaaaagttgtcaa 2688981  T
Q  253 ccaaattggttgttcaaataacactcctcat 283  Q
    |||||||| |||||||||||||| |||||||    
T  2688980 ccaaattgattgttcaaataacattcctcat 2688950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 28041829 - 28041700
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt-ta 252  Q
    ||||||||| || ||||| |||||||||||||||| || ||| |||||||| | |||    |||||||||||||   ||  |||| || ||||||||  |    
T  28041829 catactcacattgtttttaactttatctctctattgctttggcttccgtgcaagtacttactttttctttgtaaatgatggttgttaagtaagttgtcaa 28041730  T
Q  253 ccaaattggttgttcaaataacactcctca 282  Q
    |||||||| ||||| |||||||||||||||    
T  28041729 ccaaattgattgttaaaataacactcctca 28041700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 6531198 - 6531068
Alignment:
Q  154 catactcactttattttttactttatctctctatta---ctatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgt 250  Q
    ||||||||| ||||||||||||||||||||||||||   || || ||| ||||| |||||    |||||||||||||  |||  |||||  || |||| |    
T  6531198 catactcacattattttttactttatctctctattattgctttgattttcgtgcaaatacatactttttctttgtaaattatggttgtcccattagttat 6531099  T
Q  251 taccaaattggttgttcaaataacactcctc 281  Q
     | | || |||||||||||||||||||||||    
T  6531098 caaccaaatggttgttcaaataacactcctc 6531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 26832702 - 26832821
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| | |||||||||||||||||||||||  | |||||| ||||| |||||    |||||||| ||||  |||  |||||| ||||||||| |     
T  26832702 catactcacatcattttttactttatctctctattgttttggttttcgtgcaaatacatagtttttcttcgtaaattatggttgtcacataagttgtcaa 26832801  T
Q  254 caaattggttgttcaaataa 273  Q
      || |||||||||||||||    
T  26832802 tcaaatggttgttcaaataa 26832821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 32046754 - 32046877
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||    ||| ||  |||| |||| ||  ||||||||| |||  |||  |||||  ||||||||| |     
T  32046754 catactcacattattttttactttatctctctattgtgttggattttgtgcaaataacaactttttctttataaattatggttgtcccataagttgtcaa 32046853  T
Q  254 caaattggttgttcaaataacact 277  Q
    | || |||||||||||||||||||    
T  32046854 ccaaatggttgttcaaataacact 32046877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 10335606 - 10335656
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  10335606 catactcacattatttttttactttctctctctattactttggtttccgtg 10335656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 33421816 - 33421885
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  33421816 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 33421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 24842424 - 24842480
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  24842424 catactcacattatttt-tactttatctctctatttttttggtttccgtgcaaatacc 24842480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 273
Target Start/End: Original strand, 2943501 - 2943609
Alignment:
Q  165 tattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaattggttg 264  Q
    ||||||||||||||| ||||||||| | |||||| ||||| |||| |   ||||||||| ||| ||||  ||||   |||| |||||| | || ||||||    
T  2943501 tattttttactttatttctctattattttggttttcgtgcaaatatctactttttctttataaaatatggttgttttataaattgttaaccaaatggttg 2943600  T
Q  265 ttcaaataa 273  Q
    |||||||||    
T  2943601 ttcaaataa 2943609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 9260 - 9388
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttacc 254  Q
    |||||||  ||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||  |||||||||||||||| | |    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaataagttgtgatc 9359  T
Q  255 aaattggttgttcaaataacactcctcat 283  Q
    |||||||||||||||||||||||| ||||    
T  9360 aaattggttgttcaaataacactcttcat 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 2253 - 2384
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaatatataattgtcaaataagttgtta 252  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||| |||  ||| ||||||||||||||||| |    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgtca 2352  T
Q  253 ccaaattggttgttcaaataacactcctcatt 284  Q
    ||| |||| ||||||||||||||||| |||||    
T  2353 ccatattgattgttcaaataacactcatcatt 2384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 122887 - 123009
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||| ||||  ||||| |||||||| | ||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtc-aataagttatcac 122984  T
Q  254 caaattggttgttcaaataacactc 278  Q
    ||||||| || ||||||||||||||    
T  122985 caaattgatttttcaaataacactc 123009  T

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Target: scaffold0136 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 38481 - 38608
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||  |||| |||||  | ||||||| |     
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtcccaaaagttgtcaa 38580  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | || |||||||||||||||||||||||    
T  38581 ctaaatggttgttcaaataacactcctc 38608  T

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Target: scaffold0532 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 11020 - 11147
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttac 253  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||| ||||||   |||||||||||||  ||| ||||||| ||||||||| |     
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtcacataagttgtcaa 11119  T
Q  254 caaattggttgttcaaataacactcctc 281  Q
    | ||  ||||||||||||||||||||||    
T  11120 ccaaaaggttgttcaaataacactcctc 11147  T

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Target: scaffold0010 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 134318 - 134195
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa-tatataattgtcaaataagttgtta 252  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| |||| |||||||  |||||||||||||| | |||| |||||  |||| || |||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaactctatagttgtcccataaattatta 134219  T
Q  253 ccaaattggttgttcaaataacac 276  Q
      ||||||||||||||||||||||    
T  134218 ataaattggttgttcaaataacac 134195  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 19692 - 19770
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

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Target: scaffold1956 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 825 - 899
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||| |||| |  ||||||||||||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaa 899  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 23132 - 23210
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||| ||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 23210  T

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Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 11993 - 12115
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataattgtcaaataagttgttaccaaat 258  Q
    |||| ||| |||||||||||||||||||||  | |||||| |||||  ||||||  |||||||||||||  |||  |||||  | ||||||| | | ||     
T  11993 tcacattactttttactttatctctctattgttttggttttcgtgcacataccaactttttctttgtaaattatggttgtcgcaaaagttgtcaaccaaa 12092  T
Q  259 tggttgttcaaataacactcctc 281  Q
    | |||||||||||||||||||||    
T  12093 tagttgttcaaataacactcctc 12115  T

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Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 6914 - 6963
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttccgtg 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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