View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_204 (Length: 279)
Name: NF10855A_low_204
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_204 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 4 - 267
Target Start/End: Original strand, 55374568 - 55374831
Alignment:
| Q |
4 |
gaagttaattagtgtttacaatagaaagctcctcagaaatctatatatttggacggcttttaagtaggacaagcacgtcttgtgaaattgtcatgcttgg |
103 |
Q |
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| T |
55374568 |
gaagttaattagtgtttacaatagaaagctcctcagaaatctatatatttggacggcttttaagtaggacaagcacgtcttgtgaaattctcatgcttgg |
55374667 |
T |
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| Q |
104 |
attcaatataataacttatatttaagtcaaaagctaagtaaaattagaatttagttctaaatatttaacaaatttgtcagttatgctagaagttacaatg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |
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| T |
55374668 |
attcaatataataacttatatttaagtcaaaagctaagtaaaattagaatttagttttaaatatttaactaatttgtcaattatgctagaagttacaatg |
55374767 |
T |
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| Q |
204 |
gagcctagtttagattaactttaattcgtttatgaaaacttatcaacttacataagtatatatt |
267 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55374768 |
gagcctaatttagattaactttaattcgtttatgaaaacttatcaacttacataagtatatatt |
55374831 |
T |
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