View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_211 (Length: 276)
Name: NF10855A_low_211
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_211 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 44400937 - 44400668
Alignment:
| Q |
1 |
tcagaattttggtatctcatctacagaatcacccggcactgactctgactctga------tgaatatgataatactgacaatttggaccgaaggtgcata |
94 |
Q |
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| T |
44400937 |
tcagaattttggtatctcatctacagaatcacccggctctgactctgactctgactctgatgaatatgataatactgacaatttggaccgaaggtgcata |
44400838 |
T |
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| Q |
95 |
atatttattttttccaaatcagctcagatgccttctatctaaatttcgactaataattttattttaacatcagcggtcgtcgaagaacgaaacctaagcg |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44400837 |
atatttattttttccaaatcagctcagatgccttctatctaaattttgactaataattttattttaacatcagcggtcgtcgaagaacgaaacctaagcg |
44400738 |
T |
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| Q |
195 |
gtattcagagaacgagtttgttgaagaagtatcggattatgagccagagtttgacagcgatgatgatatt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44400737 |
gtattcagagaacgagtttgttgaagaagtatcggattatgagccagagtttgacagcgatgatgatatt |
44400668 |
T |
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