View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_215 (Length: 274)
Name: NF10855A_low_215
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_215 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 4 - 267
Target Start/End: Complemental strand, 13292902 - 13292638
Alignment:
| Q |
4 |
aactttagaatataggaattctactagtatatgaaagggtt-tgaagtccagacccattaagtaaattattcatatcataccagtgttgtttgttactat |
102 |
Q |
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| T |
13292902 |
aactttagaatataggaattctactagtatatgaaagggttatgaagtccagacccattaagtaaattattcatatcataccagtgttgtttgttactat |
13292803 |
T |
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| Q |
103 |
gtaataaagtcaatattaaatggatttaacttaatgtttaaaacacaaacaatacgtcaacaatgcatgcatttggaacctcaaattggaagatatcatg |
202 |
Q |
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| T |
13292802 |
gtaacaaagtcaaaattaaatggatttaacttaatgtttaaaacacaaacaatacgtaaacaatgcatacatttggaacctcaaattggaagatatcatg |
13292703 |
T |
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| Q |
203 |
attttgttgagagaaattaaacaatattcaatatatgcacataactgacgaaaaagcagaagaaa |
267 |
Q |
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| T |
13292702 |
attttgttgagagaaattaaacaatattcaatacatgcacatatctgacgaagaagcagaagaaa |
13292638 |
T |
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