View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_246 (Length: 262)
Name: NF10855A_low_246
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_246 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 22542973 - 22542741
Alignment:
| Q |
11 |
cattataggtcaaatttgaatcctataatatatgttttttcttcaaacttctcttggtcactatccttactaattcatattctagaagctagtgtataat |
110 |
Q |
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| T |
22542973 |
cattataggtcaaatttgaatcctataatatatgttttttcttcaaacttctcttggtcactatccttactaattcatattctagaagctagtgtataat |
22542874 |
T |
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| Q |
111 |
ttgcatgctatggtgtaattggctttattcaattacacaaatgatagcactgaagttttaatcaaaagatataatgcattattttttgcaatacttatac |
210 |
Q |
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| T |
22542873 |
ttgcatgctatggtgtaattggctttattcaattacacaaatgaaagcgctgaagttttaatcaaaagatataatgcattattttttgcaatacttatac |
22542774 |
T |
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| Q |
211 |
atctaagtgtcttattggttgtagttttgttat |
243 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
22542773 |
atctaagtgtcttattggttgtagttttgttat |
22542741 |
T |
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