View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10855A_low_261 (Length: 256)
Name: NF10855A_low_261
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_261 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 33675369 - 33675610
Alignment:
| Q |
12 |
aatatccaaagttcttttgcttttctaagaccagtcaattcttacatacataataaatttgattctattcatttatcttgtaacatgaataaaaggaatt |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33675369 |
aatatccaaagttcttttgcttttctaagaccagtcaattcttacatacataataaatttgattctattcatttatcttgtaacatgaataaaaggaatt |
33675468 |
T |
|
| Q |
112 |
agtcctttgatctttctgggctgnnnnnnngttgttgcaacttgcaaagcttgccgttgtatataattccttacgcattctttgggttgagttgggctat |
211 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33675469 |
agtcctttgatctttctgggctgtttttttgttgttgcaacttgcaaagcttgccgttgtatataattccttacgcattctttgggttgagttgggctat |
33675568 |
T |
|
| Q |
212 |
ttttcttcttgattaatcactttggaaatcaaaagctccctc |
253 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33675569 |
ttttcttcttgattaatcactttggaaatcaaaagctccctc |
33675610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University