View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_284 (Length: 251)
Name: NF10855A_low_284
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_284 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 14774985 - 14775204
Alignment:
| Q |
20 |
catcaaacaatactagtagttatcatggttcaaaggggagaggtgataaatcaaagataggtaaaggctttcagcatgctgcttcttcagggaccgggaa |
119 |
Q |
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| T |
14774985 |
catcaaacaatactagtagttatcatggttcaaaggggagaggtgataaatcaaagataggtaaaggctttcagcatgctgcttcttcagggaccgggaa |
14775084 |
T |
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| Q |
120 |
gtcagaggtggctcccagtattcctttcaataattatgacagcagacccttgccacagaggacaagaactcattcaaatcgatttgtcactaaatttgat |
219 |
Q |
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| T |
14775085 |
gtcagaggtggctcccagtattcctttcaataattatgacagcagacccttgccacagaggacaagaactcatgcaaatcgatttgtcactaaatttgat |
14775184 |
T |
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| Q |
220 |
agcaacatgcaaactccaaa |
239 |
Q |
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||||||||||||||| |||| |
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| T |
14775185 |
agcaacatgcaaacttcaaa |
14775204 |
T |
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