View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_301 (Length: 250)
Name: NF10855A_low_301
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_301 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 10820810 - 10820575
Alignment:
| Q |
8 |
caaagggatagtaatgattaagtatttgtgctagagaagttttaagattgttaacaaaagatttgaagttacctagctttggttttttgtagaaatacaa |
107 |
Q |
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| T |
10820810 |
caaagggatagtaatgattaagtatttgtgctagagaagttttaagattgttaacaaaagatttgaagttacctagttttggttttttgtagaaatacaa |
10820711 |
T |
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| Q |
108 |
gtatgtaactggaaaacgaccagaaagtagatcaagatttgagagattaatcactgaaaatggctttggaaaatgattgagagcttttacaacacttttc |
207 |
Q |
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| T |
10820710 |
gtatgtaactggaaaacgaccagaaagtagatcaagatttgagagattaatcactgaaaatggctttggaaaatgattgagagcttttacaacacttttc |
10820611 |
T |
|
| Q |
208 |
ttaatgaactttacttcaaatttttcattttcttgg |
243 |
Q |
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|||||||||||||||||||||||||||| ||||||| |
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| T |
10820610 |
ttaatgaactttacttcaaatttttcatattcttgg |
10820575 |
T |
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